BLASTX nr result
ID: Aconitum21_contig00009538
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00009538
(1399 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat... 278 1e-90
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 204 2e-50
gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33] gi|1... 78 1e-22
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi... 89 1e-19
gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis] 102 3e-19
>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
[Medicago truncatula]
Length = 1116
Score = 278 bits (710), Expect(2) = 1e-90
Identities = 133/136 (97%), Positives = 134/136 (98%)
Frame = +1
Query: 769 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 948
YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG
Sbjct: 935 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 994
Query: 949 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLA*FRIWPELFGRFPRVTHPF 1128
RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLA FRIWPELFGRFPR+THPF
Sbjct: 995 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF 1054
Query: 1129 ATLF*TVPTSWARQAT 1176
ATLF TVPTSWARQAT
Sbjct: 1055 ATLFSTVPTSWARQAT 1070
Score = 84.0 bits (206), Expect(2) = 1e-90
Identities = 40/44 (90%), Positives = 40/44 (90%)
Frame = +3
Query: 1182 LGASFPSAQLP*NNVRLACVKHIASVRSEPGSNSDFEYDWAL*W 1313
LGASFPSAQLP NNVRLACVKHIASV SEPGSNS FEYDWAL W
Sbjct: 1073 LGASFPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 1116
Score = 164 bits (414), Expect(3) = 3e-59
Identities = 81/97 (83%), Positives = 82/97 (84%)
Frame = +1
Query: 292 QVLLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPQAECFTR*LGP*SA*TK 471
QV LFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTP+ TK
Sbjct: 845 QVFLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPE--------------TK 890
Query: 472 GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 582
GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF
Sbjct: 891 GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 927
Score = 58.9 bits (141), Expect(3) = 3e-59
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 153 DFLLRRMSQQHKTRVSLVIGLDQTSHDT 236
DFLLRRMSQQHKTRVSLVIGLDQTSHDT
Sbjct: 816 DFLLRRMSQQHKTRVSLVIGLDQTSHDT 843
Score = 54.7 bits (130), Expect(3) = 3e-59
Identities = 28/43 (65%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 29 TLESAS--KGAGSLLTDSTATCWHXXXXXXXXXXXXXHFGCKD 151
TLESAS KGAGSLLTDSTATCWH HFGCKD
Sbjct: 774 TLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSAHFGCKD 816
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 204 bits (520), Expect(2) = 2e-50
Identities = 109/146 (74%), Positives = 110/146 (75%)
Frame = -3
Query: 590 GTPKAKAALWVPTDAGVRKHGERTGLDTLVVHAVNDECSPLVYADQGPS*RVKHSAWGVR 411
GTPKAKAALWVPTDAGVRKH ERTGLDTLVVHAVNDECSPLVY DQGP
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLVYVDQGP------------ 287
Query: 410 SQDRNSKELTGACTSGGACGLIRYNAQNLTSP*HMNNKTCP*RDGTYFHTGAAWLSSARV 231
+RNSKELTGACTSGGACGLIRYNAQNLTS AAWLSSARV
Sbjct: 288 --NRNSKELTGACTSGGACGLIRYNAQNLTS--------------------AAWLSSARV 325
Query: 230 VRCLVKSYNERNPRFVLLRHAPKEKV 153
VRCLVKSYNERNPRFVLLRHAPKEKV
Sbjct: 326 VRCLVKSYNERNPRFVLLRHAPKEKV 351
Score = 22.3 bits (46), Expect(2) = 2e-50
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 160 RKSVFATEVSRG 125
++ VFATEVSRG
Sbjct: 348 KEKVFATEVSRG 359
Score = 153 bits (386), Expect(2) = 1e-49
Identities = 83/118 (70%), Positives = 86/118 (72%)
Frame = -3
Query: 1214 GELGRRKRGS*LKVACLAQEVGTV*NKVANGCVTRGNLPNSSGQILNQAKKRCXXXXXXX 1035
G K +KVACLAQEVGTV NKVANGCV RGNLPNSSGQIL +AKK
Sbjct: 106 GSWAEGKEAPSVKVACLAQEVGTVENKVANGCVMRGNLPNSSGQILKKAKK--------- 156
Query: 1034 XXXXXXXLTKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNIA*VKKG 861
LTKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNI + G
Sbjct: 157 -------LTKPMMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNICAIMTG 207
Score = 71.6 bits (174), Expect(2) = 1e-49
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -2
Query: 831 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 730
CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR
Sbjct: 202 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 235
Score = 95.5 bits (236), Expect = 3e-17
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -1
Query: 1330 RFTRFYHYKAQSYSKSEFDPGSERTLAICLTHASRTLF*GSWAEGKEAPS 1181
RFTRFYH +AQSYSK EFDPGSE TLAICLTHASRTLF GSWAEGKEAPS
Sbjct: 67 RFTRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGKEAPS 116
>gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33]
gi|145690754|gb|ABP91259.1| unknown protein
[Streptococcus suis 98HAH33] gi|145690985|gb|ABP91490.1|
unknown protein [Streptococcus suis 98HAH33]
gi|145691080|gb|ABP91585.1| unknown protein
[Streptococcus suis 98HAH33]
Length = 186
Score = 77.8 bits (190), Expect(4) = 1e-22
Identities = 41/69 (59%), Positives = 46/69 (66%)
Frame = +2
Query: 467 PRANTHRLRHGLPGYLILFAPHAFAPQRR*GPRELPSLLAFLRRSPDFTPTHEIPLSSVS 646
P +THRLR GLPGYLILFAPHAF PQR+ RE S FL S FT TH IPLS +
Sbjct: 23 PTPSTHRLRRGLPGYLILFAPHAFEPQRQLQTREPLSPPVFLHISTHFTATHGIPLSPSA 82
Query: 647 LKLIGFESI 673
LK F+S+
Sbjct: 83 LKFDSFQSV 91
Score = 38.1 bits (87), Expect(4) = 1e-22
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 864 LLHSRDIAGSGFRPLSKIPHCCPP 935
LLHSR +A SG PL KIP+CC P
Sbjct: 163 LLHSRGVARSGLPPLPKIPYCCLP 186
Score = 32.0 bits (71), Expect(4) = 1e-22
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +1
Query: 691 LSLSTRFTAYVPFTXXXXXXXXXXXXYRGCWHGVSRGFFL 810
L L T TA FT YRGCWH VSR F +
Sbjct: 98 LLLQTYQTACARFTPNKSGQRSGPTYYRGCWHVVSRPFLV 137
Score = 26.2 bits (56), Expect(4) = 1e-22
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 405 LRPYSPGGVFHALAGPL 455
+R YSPGGV +ALA L
Sbjct: 1 MRSYSPGGVLNALAAAL 17
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
jensenii 269-3]
Length = 174
Score = 88.6 bits (218), Expect(2) = 1e-19
Identities = 55/121 (45%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Frame = +1
Query: 688 RLSLSTRFTAYVPFTXXXXXXXXXXXXYRGCWHGVSRGFFLESCHDRAL-------DERA 846
RLS T +A FT YRGCWH VSR F ++ +A
Sbjct: 54 RLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTE 113
Query: 847 LQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLVSLYLT 1026
L FFTHA LL + F HC RFPTAA R S GRVSVP+W I +L II LVS YLT
Sbjct: 114 LYDPKTFFTHAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLT 173
Query: 1027 N 1029
N
Sbjct: 174 N 174
Score = 35.8 bits (81), Expect(2) = 1e-19
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +3
Query: 531 MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKF 629
MLS SV PES LR W S + LRI PLH +F
Sbjct: 1 MLSSLSVSYRPESRLRHWCSSIYLRIPPLHMEF 33
>gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis]
Length = 104
Score = 102 bits (253), Expect = 3e-19
Identities = 53/81 (65%), Positives = 57/81 (70%)
Frame = +1
Query: 322 VRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPQAECFTR*LGP*SA*TKGEHSSFTAWT 501
VRF A +RIKPHAPPLV+ PVNSFEF C RTPQ E F+ LG T+ E SSFTAWT
Sbjct: 24 VRFLAYHRIKPHAPPLVRTPVNSFEFHRCRRTPQVENFSVSLGLACQRTQAEFSSFTAWT 83
Query: 502 TRVSNPVRSPCFRTPASVGTQ 564
TRVSNPVRSP FR S Q
Sbjct: 84 TRVSNPVRSPRFRASVSNNAQ 104