BLASTX nr result

ID: Aconitum21_contig00009396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009396
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LL85.1|WHY1_SOLTU RecName: Full=Single-stranded DNA-bindig ...   303   3e-80
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul...   301   8e-80
ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|1...   298   7e-79
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   298   9e-79
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253...   298   9e-79

>sp|Q9LL85.1|WHY1_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY1,
           chloroplastic; AltName: Full=DNA-binding protein p24;
           AltName: Full=PR-10a binding factor 2; Short=PBF-2;
           AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
           Precursor gi|9651810|gb|AAF91282.1|AF233342_1
           DNA-binding protein p24 [Solanum tuberosum]
          Length = 274

 Score =  303 bits (776), Expect = 3e-80
 Identities = 135/188 (71%), Positives = 171/188 (90%)
 Frame = -1

Query: 752 GASPSRVFVGYSVYKGKAALTITPKSPDFTSLDSGAYKVSREGVVLLQFAPASGTRQYDW 573
           GAS  +VFVGYS+YKGKAALT+ P+SP+F+ LDSGA+K+SREG+V+LQFAPA+G RQYDW
Sbjct: 86  GASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDW 145

Query: 572 TRKQVFSLSVTEIGTLMGLGARDSCEFFHDPNKGKSEEGKVRKILKVEPLPDGSGHFFNL 393
           +RKQVFSLSVTEIG+++ LGA+DSCEFFHDPNKG+S+EG+VRK+LKVEPLPDGSGHFFNL
Sbjct: 146 SRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNL 205

Query: 392 SVQNKLLNVDESIYIPISKAEFTVIVSSFSFILPFLLGWHAFADSIKPEESVRFNNVNSQ 213
           SVQNKL+N+DE+IYIP++KAEF V+VS+F+F++P+LLGWH   +S KPE++ R NN N +
Sbjct: 206 SVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNNANPR 265

Query: 212 VGTDLEWN 189
            G +LEWN
Sbjct: 266 SGAELEWN 273


>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
           gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
           Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
           Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 gi|157878745|pdb|1L3A|D Chain D,
           Structure Of The Plant Transcriptional Regulator Pbf-2
          Length = 227

 Score =  301 bits (772), Expect = 8e-80
 Identities = 134/188 (71%), Positives = 170/188 (90%)
 Frame = -1

Query: 752 GASPSRVFVGYSVYKGKAALTITPKSPDFTSLDSGAYKVSREGVVLLQFAPASGTRQYDW 573
           GAS  +VFVGYS+YKGKAALT+ P+SP+F+ LDSGA+K+SREG+V+LQFAPA+G RQYDW
Sbjct: 32  GASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDW 91

Query: 572 TRKQVFSLSVTEIGTLMGLGARDSCEFFHDPNKGKSEEGKVRKILKVEPLPDGSGHFFNL 393
           +RKQVFSLSVTEIG+++ LG +DSCEFFHDPNKG+S+EG+VRK+LKVEPLPDGSGHFFNL
Sbjct: 92  SRKQVFSLSVTEIGSIISLGTKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNL 151

Query: 392 SVQNKLLNVDESIYIPISKAEFTVIVSSFSFILPFLLGWHAFADSIKPEESVRFNNVNSQ 213
           SVQNKL+N+DE+IYIP++KAEF V+VS+F+F++P+LLGWH   +S KPE++ R NN N +
Sbjct: 152 SVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNNANPR 211

Query: 212 VGTDLEWN 189
            G +LEWN
Sbjct: 212 SGAELEWN 219


>ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|118485247|gb|ABK94483.1|
           unknown [Populus trichocarpa]
           gi|222851421|gb|EEE88968.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  298 bits (764), Expect = 7e-79
 Identities = 137/189 (72%), Positives = 169/189 (89%)
 Frame = -1

Query: 755 VGASPSRVFVGYSVYKGKAALTITPKSPDFTSLDSGAYKVSREGVVLLQFAPASGTRQYD 576
           VG SP +VFVG+S+YKGKAALT+ P+SP+F+ LDSGAYK+ +EG VLLQFAPA+  RQYD
Sbjct: 76  VGESPPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQFAPAASVRQYD 135

Query: 575 WTRKQVFSLSVTEIGTLMGLGARDSCEFFHDPNKGKSEEGKVRKILKVEPLPDGSGHFFN 396
           WTRKQVFSLSVTEIG L+ L A+ SCEFFHDPNKGKS+EGKVRK+LKVEPLPDGSGHFFN
Sbjct: 136 WTRKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEPLPDGSGHFFN 195

Query: 395 LSVQNKLLNVDESIYIPISKAEFTVIVSSFSFILPFLLGWHAFADSIKPEESVRFNNVNS 216
           LSVQNK+LN+DE+IYIP++KAE+TV+ S+F++ILP+LLGWHA+A+SIKP++S R NN + 
Sbjct: 196 LSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPDDSSRGNNASP 255

Query: 215 QVGTDLEWN 189
           + G D EW+
Sbjct: 256 RYGGDYEWS 264


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
           gi|223540620|gb|EEF42183.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  298 bits (763), Expect = 9e-79
 Identities = 135/187 (72%), Positives = 168/187 (89%)
 Frame = -1

Query: 749 ASPSRVFVGYSVYKGKAALTITPKSPDFTSLDSGAYKVSREGVVLLQFAPASGTRQYDWT 570
           A+  RV+VG+S+YKGKAALT+ P++P+F +LDSGA+KV+REG VLLQFAPA+G RQYDW+
Sbjct: 84  AAVPRVYVGHSIYKGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWS 143

Query: 569 RKQVFSLSVTEIGTLMGLGARDSCEFFHDPNKGKSEEGKVRKILKVEPLPDGSGHFFNLS 390
           RKQVFSLSVTEIGT++ LGARDSCEFFHDPNKGKS+EGK+RK+LKVEPLPDGSGHFFNLS
Sbjct: 144 RKQVFSLSVTEIGTIISLGARDSCEFFHDPNKGKSDEGKIRKVLKVEPLPDGSGHFFNLS 203

Query: 389 VQNKLLNVDESIYIPISKAEFTVIVSSFSFILPFLLGWHAFADSIKPEESVRFNNVNSQV 210
           VQNK +N+DESIYIP++KAEF V++S+F++ILP+LLGWH FA+SIKP+ +   NN N + 
Sbjct: 204 VQNKPMNMDESIYIPVTKAEFAVLISAFNYILPYLLGWHTFANSIKPDLNGHMNNANPRF 263

Query: 209 GTDLEWN 189
           G D EW+
Sbjct: 264 GGDYEWS 270


>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
           gi|296086421|emb|CBI32010.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  298 bits (763), Expect = 9e-79
 Identities = 139/188 (73%), Positives = 170/188 (90%)
 Frame = -1

Query: 752 GASPSRVFVGYSVYKGKAALTITPKSPDFTSLDSGAYKVSREGVVLLQFAPASGTRQYDW 573
           GA   RVFVG+S+YKGKAALT+ PK+P+FT LDSGA+KVS+EG VLLQFAPA+G RQYDW
Sbjct: 81  GALQPRVFVGHSIYKGKAALTVEPKAPEFTPLDSGAFKVSKEGFVLLQFAPAAGVRQYDW 140

Query: 572 TRKQVFSLSVTEIGTLMGLGARDSCEFFHDPNKGKSEEGKVRKILKVEPLPDGSGHFFNL 393
            RKQVFSLSVTEIG+L+ LGAR+SCEFFHDP KG+SEEGKVRK+LKVEPLPDGSGHFFNL
Sbjct: 141 GRKQVFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEGKVRKVLKVEPLPDGSGHFFNL 200

Query: 392 SVQNKLLNVDESIYIPISKAEFTVIVSSFSFILPFLLGWHAFADSIKPEESVRFNNVNSQ 213
           SVQNKLLN+DE+IYIP+++AEF V++S+F+FI+P+LLGWHA+A+SIKP+++ R NN N +
Sbjct: 201 SVQNKLLNMDENIYIPVTRAEFAVLISAFNFIVPYLLGWHAYANSIKPDDTSRVNNANPR 260

Query: 212 VGTDLEWN 189
            G D EW+
Sbjct: 261 SG-DFEWS 267


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