BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009349
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   535   e-150
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   534   e-149
ref|XP_002513521.1| transcription initiation factor iib, putativ...   526   e-147
ref|XP_002534470.1| transcription initiation factor iib, putativ...   523   e-146
ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group] g...   521   e-145

>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|296088031|emb|CBI35314.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  535 bits (1379), Expect = e-150
 Identities = 265/310 (85%), Positives = 285/310 (91%), Gaps = 1/310 (0%)
 Frame = -3

Query: 1124 DAYCTDCKKNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPNRVGGP 945
            DA+CTDCKKNTEVVFDHSAGDTVCSECGLVLE+HSIDETSEWRTFANESGDNDP RVGGP
Sbjct: 3    DAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGP 62

Query: 944  SNPLLTDGGLSTVISKPNXXXXXXXXXXXGRWQNRGNNPDRSLILAFKTIATMSDRLNLV 765
            SNPLLTDGGLSTVI+KPN           GRWQNRG+NPDR LILAFKTIATMSDRL LV
Sbjct: 63   SNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLV 122

Query: 764  ATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKKE 585
            ATIKDRANEIYKKVEDQKS RGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATKKE
Sbjct: 123  ATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKE 182

Query: 584  IGRAKEYIVKQLEVEMG-PMEMGAIHAGDFLRRFCSHLGMTNQTVKAAQEVVQKTEELDI 408
            IGRAKEYIVKQLE E G  +EMG IHAGDF+RRFCS+LGMTNQ VKAAQE VQK+EE DI
Sbjct: 183  IGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEFDI 242

Query: 407  RRSPISVAAAVIYMVTQLSDDKKLLRDISMATGVAEGTIRNSYKDLYPYASRLIPSWFAK 228
            RRSP+S+AAAVIY++TQLSD+KKLLRDIS+ATGVAEGTIRNSYKDLYP+ SR+IPSW+AK
Sbjct: 243  RRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWYAK 302

Query: 227  EQDLKNLSSP 198
            E+DL+NL SP
Sbjct: 303  EEDLRNLCSP 312


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
            gi|297739630|emb|CBI29812.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  534 bits (1376), Expect = e-149
 Identities = 264/310 (85%), Positives = 285/310 (91%), Gaps = 1/310 (0%)
 Frame = -3

Query: 1124 DAYCTDCKKNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPNRVGGP 945
            DA+CTDCKKNTEVVFDHSAGDTVCSECGLVLE+HSIDETSEWRTFANESGDNDP RVGGP
Sbjct: 3    DAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGP 62

Query: 944  SNPLLTDGGLSTVISKPNXXXXXXXXXXXGRWQNRGNNPDRSLILAFKTIATMSDRLNLV 765
            SNPLLTDGGLSTVI+KPN           GRWQNRG+NPDR LILAFKTIATMSDRL LV
Sbjct: 63   SNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLV 122

Query: 764  ATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKKE 585
            ATIKDRANEIYKKVEDQKS RGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATKKE
Sbjct: 123  ATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKE 182

Query: 584  IGRAKEYIVKQLEVEMG-PMEMGAIHAGDFLRRFCSHLGMTNQTVKAAQEVVQKTEELDI 408
            IGRAKEYIVKQLE E G  +EMG IHAGDF+RRFCS+LGMTNQ VKAAQE VQK+EE DI
Sbjct: 183  IGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEFDI 242

Query: 407  RRSPISVAAAVIYMVTQLSDDKKLLRDISMATGVAEGTIRNSYKDLYPYASRLIPSWFAK 228
            RRSP+S+AAAVIY++TQLSD+KKLLRDIS+ATGVAEGTIRNSYKDLYP+ S++IPSW+AK
Sbjct: 243  RRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWYAK 302

Query: 227  EQDLKNLSSP 198
            E+DL+NL SP
Sbjct: 303  EEDLRNLCSP 312


>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
            gi|223547429|gb|EEF48924.1| transcription initiation
            factor iib, putative [Ricinus communis]
          Length = 312

 Score =  526 bits (1356), Expect = e-147
 Identities = 261/310 (84%), Positives = 280/310 (90%), Gaps = 1/310 (0%)
 Frame = -3

Query: 1124 DAYCTDCKKNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPNRVGGP 945
            D YC DCK+ TEVVFDHSAGDTVCSECGLVLE+HSIDETSEWRTFANES DNDP RVGGP
Sbjct: 3    DTYCPDCKRPTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESADNDPVRVGGP 62

Query: 944  SNPLLTDGGLSTVISKPNXXXXXXXXXXXGRWQNRGNNPDRSLILAFKTIATMSDRLNLV 765
            SNPLL DGGLSTVISKP            GRWQNRG+NPDRSLI AFKTIATMSDRL LV
Sbjct: 63   SNPLLADGGLSTVISKPTGASGDFLTSSLGRWQNRGSNPDRSLIQAFKTIATMSDRLGLV 122

Query: 764  ATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKKE 585
            ATIKDRANEIYKKVEDQK +RGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATKKE
Sbjct: 123  ATIKDRANEIYKKVEDQKPLRGRNQDAVLAACLYIACRQEDKPRTVKEICSVANGATKKE 182

Query: 584  IGRAKEYIVKQLEVEMG-PMEMGAIHAGDFLRRFCSHLGMTNQTVKAAQEVVQKTEELDI 408
            IGRAKEYIVKQLEVE+G  MEMG IHAGDFLRRFCSHLGM NQ VKAAQE V+K+EELDI
Sbjct: 183  IGRAKEYIVKQLEVELGQSMEMGTIHAGDFLRRFCSHLGMNNQAVKAAQEAVKKSEELDI 242

Query: 407  RRSPISVAAAVIYMVTQLSDDKKLLRDISMATGVAEGTIRNSYKDLYPYASRLIPSWFAK 228
            RRSPIS+AAA+IYM+TQLS++KKLL+DIS +TGVAEGTIRNSYKDLYPYASR++PSW+AK
Sbjct: 243  RRSPISIAAAIIYMITQLSEEKKLLKDISTSTGVAEGTIRNSYKDLYPYASRIVPSWYAK 302

Query: 227  EQDLKNLSSP 198
            E+DL NL SP
Sbjct: 303  EEDLINLCSP 312


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
            gi|223525233|gb|EEF27913.1| transcription initiation
            factor iib, putative [Ricinus communis]
          Length = 312

 Score =  523 bits (1346), Expect = e-146
 Identities = 259/310 (83%), Positives = 281/310 (90%), Gaps = 1/310 (0%)
 Frame = -3

Query: 1124 DAYCTDCKKNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPNRVGGP 945
            DAYC+DCK+ TEVVFDHSAGDTVCSECGLVLE+HSIDETSEWRTFANESGDNDP RVGGP
Sbjct: 3    DAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGP 62

Query: 944  SNPLLTDGGLSTVISKPNXXXXXXXXXXXGRWQNRGNNPDRSLILAFKTIATMSDRLNLV 765
            +NPLL DGGLSTVI+KPN           GRWQNRG+NPDR LILAFKTIATMSDRL LV
Sbjct: 63   TNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLV 122

Query: 764  ATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKKE 585
            ATIKDRANEIYKKVEDQKS RGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATKKE
Sbjct: 123  ATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKE 182

Query: 584  IGRAKEYIVKQLEVEMG-PMEMGAIHAGDFLRRFCSHLGMTNQTVKAAQEVVQKTEELDI 408
            IGRAKEYIVKQL +E G  +EMG IHAGDF+RRFCS+LGM NQ +KAAQE VQK+EE DI
Sbjct: 183  IGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEFDI 242

Query: 407  RRSPISVAAAVIYMVTQLSDDKKLLRDISMATGVAEGTIRNSYKDLYPYASRLIPSWFAK 228
            RRSPIS+AAAVIY+++QLSDDKKLLRDIS ATGVAEGTIRNSYKDLYP+ S++IPSW+AK
Sbjct: 243  RRSPISIAAAVIYIISQLSDDKKLLRDISHATGVAEGTIRNSYKDLYPHVSKIIPSWYAK 302

Query: 227  EQDLKNLSSP 198
            E+DLKNL SP
Sbjct: 303  EEDLKNLCSP 312


>ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group]
            gi|21362998|sp|Q8W0W3.1|TF2B_ORYSJ RecName:
            Full=Transcription initiation factor IIB; AltName:
            Full=General transcription factor TFIIB
            gi|18481632|gb|AAL73491.1|AF464908_1 general
            transcription factor TFIIB [Oryza sativa]
            gi|50725809|dbj|BAD33339.1| Transcription initiation
            factor IIB [Oryza sativa Japonica Group]
            gi|50726577|dbj|BAD34211.1| Transcription initiation
            factor IIB [Oryza sativa Japonica Group]
            gi|113632008|dbj|BAF25689.1| Os09g0534800 [Oryza sativa
            Japonica Group] gi|125564497|gb|EAZ09877.1| hypothetical
            protein OsI_32170 [Oryza sativa Indica Group]
            gi|125606444|gb|EAZ45480.1| hypothetical protein
            OsJ_30135 [Oryza sativa Japonica Group]
            gi|347737122|gb|AEP20532.1| transcription factor [Oryza
            sativa Japonica Group]
          Length = 312

 Score =  521 bits (1342), Expect = e-145
 Identities = 260/310 (83%), Positives = 282/310 (90%), Gaps = 1/310 (0%)
 Frame = -3

Query: 1124 DAYCTDCKKNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPNRVGGP 945
            D++C DCKK+TEV FDHSAGDTVC+ECGLVLEAHS+DETSEWRTFANES DNDP RVGGP
Sbjct: 3    DSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVGGP 62

Query: 944  SNPLLTDGGLSTVISKPNXXXXXXXXXXXGRWQNRGNNPDRSLILAFKTIATMSDRLNLV 765
            +NPLLTDGGLSTVI+KPN           GRWQNRG+NPDRSLILAF+TIA M+DRL LV
Sbjct: 63   TNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLGLV 122

Query: 764  ATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKKE 585
            ATIKDRANEIYKKVED KSIRGRNQDAILAACLYIACRQED+PRTVKEICSVANGATKKE
Sbjct: 123  ATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKE 182

Query: 584  IGRAKEYIVKQLEVEMG-PMEMGAIHAGDFLRRFCSHLGMTNQTVKAAQEVVQKTEELDI 408
            IGRAKE+IVKQLEVEMG  MEMG IHAGDFLRRFCS LGM NQ VKAAQE VQ++EELDI
Sbjct: 183  IGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEELDI 242

Query: 407  RRSPISVAAAVIYMVTQLSDDKKLLRDISMATGVAEGTIRNSYKDLYPYASRLIPSWFAK 228
            RRSPIS+AAAVIYM+TQLSDDKK L+DIS+ATGVAEGTIRNSYKDLYPYASRLIP+ +AK
Sbjct: 243  RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTYAK 302

Query: 227  EQDLKNLSSP 198
            E+DLKNL +P
Sbjct: 303  EEDLKNLCTP 312