BLASTX nr result

ID: Aconitum21_contig00009262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009262
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...    84   2e-14
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...    81   2e-13
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...    76   4e-12
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...    75   1e-11
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...    74   2e-11

>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
           gi|355516770|gb|AES98393.1| ATP-dependent helicase,
           putative [Medicago truncatula]
          Length = 1764

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 42/85 (49%), Positives = 50/85 (58%)
 Frame = +2

Query: 365 ADFYAAIKPSKNAPMXXXXXXXXXXXXRTYQRRAAYWMVKREREISHDSGETYHEFLKPL 544
           A FY AIKPSK  PM            R YQRRAA WMVKRE+ +   +    ++F  PL
Sbjct: 257 AGFYEAIKPSKTEPMLEDDIPELLPELRPYQRRAALWMVKREKAMEDQAEIERNQFHSPL 316

Query: 545 CTPVNFLHTDSRMFYNPFRRRASLC 619
           C PV+FL T S+MF+NPF    SLC
Sbjct: 317 CVPVDFLDTRSKMFFNPFSGNISLC 341


>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
           gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
           helicase, putative [Ricinus communis]
          Length = 1588

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +2

Query: 365 ADFYAAIKPSKNAPMXXXXXXXXXXXXRTYQRRAAYWMVKREREISHDSGETYH-EFLKP 541
           A FY AIKPSK++P+            R YQRRAAYWM+++E+  S DS E    +F  P
Sbjct: 260 AGFYEAIKPSKSSPILNDDLPDLLPVLRPYQRRAAYWMLQQEKGHSRDSIEKERSQFFSP 319

Query: 542 LCTPVNFLHTDSRMFYNPFRRRASLC 619
           LC PV+FL +   MFYNPF    SLC
Sbjct: 320 LCMPVDFLDSCLTMFYNPFSGNVSLC 345


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
 Frame = +2

Query: 365 ADFYAAIKPSKNAPMXXXXXXXXXXXXRTYQRRAAYWMVKREREISHDSGETYHE-FLKP 541
           A F  AIKPSK+ PM            R YQRRAA+WMV+RE+ +    GE     F  P
Sbjct: 263 AGFCEAIKPSKSEPMLKDDIPELLPKLRPYQRRAAFWMVEREKAVEESRGERERNLFHSP 322

Query: 542 LCTPVNFLHTD---SRMFYNPFRRRASLC 619
           LC PV+FL T    S+MF+NPF    SLC
Sbjct: 323 LCIPVDFLDTSSQISQMFFNPFSGSISLC 351


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 41/85 (48%), Positives = 48/85 (56%)
 Frame = +2

Query: 362 AADFYAAIKPSKNAPMXXXXXXXXXXXXRTYQRRAAYWMVKREREISHDSGETYHEFLKP 541
           AA FY AIKPSK  P+            R YQRRAAYWMV  +REI  + G  +     P
Sbjct: 262 AAGFYEAIKPSKEDPLLDYDMPDLLPELRPYQRRAAYWMV--QREIKGEGGSLF----SP 315

Query: 542 LCTPVNFLHTDSRMFYNPFRRRASL 616
           LC PV+F+ +  RMFYNPF    SL
Sbjct: 316 LCMPVDFVDSFERMFYNPFSGNVSL 340


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/83 (48%), Positives = 49/83 (59%)
 Frame = +2

Query: 365 ADFYAAIKPSKNAPMXXXXXXXXXXXXRTYQRRAAYWMVKREREISHDSGETYHEFLKPL 544
           A  Y AIKPSK+ PM            R YQRRAA+WMV++E+  S  S +   +F  PL
Sbjct: 269 AGLYEAIKPSKSDPMLEDDLPDLLPTLRPYQRRAAHWMVQQEKGES-SSVKERSQFFSPL 327

Query: 545 CTPVNFLHTDSRMFYNPFRRRAS 613
           C PV+FL T S+MFYNPF    S
Sbjct: 328 CMPVDFLDTCSKMFYNPFSGNVS 350


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