BLASTX nr result

ID: Aconitum21_contig00009260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009260
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti...   243   1e-62
emb|CAN69669.1| hypothetical protein VITISV_019154 [Vitis vinifera]   243   1e-62
ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thalia...   228   6e-58
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub...   226   2e-57
ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2...   221   7e-56

>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
          Length = 374

 Score =  243 bits (621), Expect = 1e-62
 Identities = 126/184 (68%), Positives = 139/184 (75%), Gaps = 7/184 (3%)
 Frame = -3

Query: 533 LIALRPSXXXXXXXXXH----LSSIFFLHVFDPSLNQWLRFNLDFLPCRIPIPVASSLGL 366
           LIALRP          H    +SS   LHVFDPS NQW+RF L FLP R P PVASSLGL
Sbjct: 57  LIALRPPHHHHHHHHHHHNRDVSSHNALHVFDPSSNQWVRFPLSFLPFRSPTPVASSLGL 116

Query: 365 VYFWTDST---DSSKSLVVCNPLTRQFRVLPQLGSAWSRHGTVLVGSARPVLVLTELAAL 195
           VY W DS    +S+KSL+VCNPLTR F+VLPQLGSAWSRHG+VLVGS   VLVLTELA L
Sbjct: 117 VYLWADSLNSLESNKSLIVCNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATL 176

Query: 194 YFSGSGSWLNFSSNLPSKPRSPVLVSDSVFTLCDVGSPWRSQWKLFACSLAELDKCRGWN 15
           YFSGS  WL FSSNLPSKPRSP+LVSDSV  LCDVGSPWRSQWKLFAC+L  L K + W 
Sbjct: 177 YFSGSDQWLKFSSNLPSKPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWT 236

Query: 14  QLEK 3
           +L++
Sbjct: 237 RLDR 240


>emb|CAN69669.1| hypothetical protein VITISV_019154 [Vitis vinifera]
          Length = 876

 Score =  243 bits (621), Expect = 1e-62
 Identities = 126/184 (68%), Positives = 139/184 (75%), Gaps = 7/184 (3%)
 Frame = -3

Query: 533 LIALRPSXXXXXXXXXH----LSSIFFLHVFDPSLNQWLRFNLDFLPCRIPIPVASSLGL 366
           LIALRP          H    +SS   LHVFDPS NQW+RF L FLP R P PVASSLGL
Sbjct: 57  LIALRPPHHHHHHHHHHHNRDVSSHNALHVFDPSSNQWVRFPLSFLPFRSPTPVASSLGL 116

Query: 365 VYFWTDST---DSSKSLVVCNPLTRQFRVLPQLGSAWSRHGTVLVGSARPVLVLTELAAL 195
           VY W DS    +S+KSL+VCNPLTR F+VLPQLGSAWSRHG+VLVGS   VLVLTELA L
Sbjct: 117 VYLWADSLNSLESNKSLIVCNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATL 176

Query: 194 YFSGSGSWLNFSSNLPSKPRSPVLVSDSVFTLCDVGSPWRSQWKLFACSLAELDKCRGWN 15
           YFSGS  WL FSSNLPSKPRSP+LVSDSV  LCDVGSPWRSQWKLFAC+L  L K + W 
Sbjct: 177 YFSGSDQWLKFSSNLPSKPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWT 236

Query: 14  QLEK 3
           +L++
Sbjct: 237 RLDR 240


>ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thaliana]
           gi|75098682|sp|O49279.1|SKI15_ARATH RecName:
           Full=SKP1-interacting partner 15; AltName: Full=F-box
           only protein 3 gi|2829924|gb|AAC00632.1| Unknown protein
           [Arabidopsis thaliana] gi|17473630|gb|AAL38278.1|
           unknown protein [Arabidopsis thaliana]
           gi|21553606|gb|AAM62699.1| F-box protein AtFBX3
           [Arabidopsis thaliana] gi|30725584|gb|AAP37814.1|
           At1g76920 [Arabidopsis thaliana]
           gi|332197782|gb|AEE35903.1| SKP1-interacting partner 15
           [Arabidopsis thaliana]
          Length = 374

 Score =  228 bits (580), Expect = 6e-58
 Identities = 115/162 (70%), Positives = 125/162 (77%), Gaps = 7/162 (4%)
 Frame = -3

Query: 467 FLHVFDPSLNQWLRFNLDFLPCRIPIPVASSLGLVYFWTDSTD---SSKSLVVCNPLTRQ 297
           ++HV+DP  NQW RFNLDFLP R P PVASS GL+Y W DS D   SSKSLV CNPLTRQ
Sbjct: 83  YIHVYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYLWGDSIDLAESSKSLVACNPLTRQ 142

Query: 296 FRVLPQLGSAWSRHGTVLVGSARPVLVLTELAALYFSG---SGSWLNFSSNLPSKPRSPV 126
           F+VLPQLGSAWSRHGTVLV S   V+VLTELAALY+SG   +  WL FSSNLPSKPRSPV
Sbjct: 143 FKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGTVVANQWLKFSSNLPSKPRSPV 202

Query: 125 LVSDSVFTLCDVGSPWRSQWKLFACSLAELDKCR-GWNQLEK 3
           L+S SVF LCDVGSPWRSQWKLF+C L  L      W  LEK
Sbjct: 203 LMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEK 244


>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333503|gb|EFH63921.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score =  226 bits (576), Expect = 2e-57
 Identities = 114/162 (70%), Positives = 124/162 (76%), Gaps = 7/162 (4%)
 Frame = -3

Query: 467 FLHVFDPSLNQWLRFNLDFLPCRIPIPVASSLGLVYFWTDSTD---SSKSLVVCNPLTRQ 297
           ++HV+DP  NQW RFNLDFLP R P PVASS GL+Y W DS D   SSKSLV CNPLTRQ
Sbjct: 83  YIHVYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYLWGDSIDLAESSKSLVACNPLTRQ 142

Query: 296 FRVLPQLGSAWSRHGTVLVGSARPVLVLTELAALYFSG---SGSWLNFSSNLPSKPRSPV 126
           F+VLPQLGSAWSRHGTVLV S   V+VLTELAALY+SG   +  W  FSSNLPSKPRSPV
Sbjct: 143 FKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGTVVANQWFKFSSNLPSKPRSPV 202

Query: 125 LVSDSVFTLCDVGSPWRSQWKLFACSLAELDKCR-GWNQLEK 3
           L+S SVF LCDVGSPWRSQWKLF+C L  L      W  LEK
Sbjct: 203 LMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEK 244


>ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  221 bits (562), Expect = 7e-56
 Identities = 117/190 (61%), Positives = 139/190 (73%), Gaps = 12/190 (6%)
 Frame = -3

Query: 536 RLIALRPSXXXXXXXXXH----LSSIFFLHVFDPSLNQWLRFNLDFLPCRIPIPVASSLG 369
           R +ALRP               +SS+ +LHVFDP  NQWLRF+L FLP R P PVAS+ G
Sbjct: 56  RFLALRPPHHHHHLHHQRQNSHVSSVPYLHVFDPDQNQWLRFSLSFLPFRSPHPVASASG 115

Query: 368 LVYFWTDST---DSSKSLVVCNPLTRQFRVLPQLGSAWSRHGTVLVGSARP-VLVLTELA 201
           L+Y W +S    +S++SLVVCNPLTRQF+VLPQLGSAWSRHG+VLV S    V+VLTELA
Sbjct: 116 LIYLWGESPTSIESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELA 175

Query: 200 ALYFSGSG---SWLNFSSNLPSKPRSPVLVSDSVFTLCDVGSPWRSQWKLFACSLAEL-D 33
           ALYFS +    SWL FS+NLPSKPRSP+L+SDSVF LCDVGSPWRSQWKLF C L++L +
Sbjct: 176 ALYFSNTNKTNSWLTFSANLPSKPRSPILISDSVFALCDVGSPWRSQWKLFTCILSKLNN 235

Query: 32  KCRGWNQLEK 3
               W  LE+
Sbjct: 236 NYNNWVCLER 245


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