BLASTX nr result
ID: Aconitum21_contig00009070
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00009070
(1312 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 50 2e-18
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 50 8e-18
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 50 8e-18
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 52 5e-15
gb|AAT40486.1| putative polyprotein [Solanum demissum] 48 3e-13
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 50.1 bits (118), Expect(3) = 2e-18
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = +1
Query: 808 GEQRDGAYWLQALHSDVWVCHTASTGSSDFWHCRLGHPSHSILS*PMINSIEKIRPNDSP 987
GEQ +G Y+L+ + + + T S S + WH R+GHPS ++ +I ++ + ND
Sbjct: 295 GEQCEGLYFLKGV-APIRAYKTTSIASYELWHRRMGHPSSRVVD--LIXEVDSVGRNDGX 351
Query: 988 ----CDICLKAKHTR 1020
CDIC +A+ TR
Sbjct: 352 KNKFCDICFRAQQTR 366
Score = 45.1 bits (105), Expect(3) = 2e-18
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 417 SGFSNEQWNSMHQLFQSINSPASEMLSGK--MFPLILDTRASYHMTG 551
SG S+EQW ++ + S S A++ML+GK + P I+DT A +HMTG
Sbjct: 161 SGLSDEQWATLLTMLNSHKSGANZMLTGKQNILPWIIDTGAXHHMTG 207
Score = 44.7 bits (104), Expect(3) = 2e-18
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 611 GDTSKAEKA*TLYFGN-IHVSNVLYIPHLTCNLLSFAQLTNNRVCVVTLTHRLCVLHDPI 787
G +KA K T+ G + + +VL++P L CNL+ QL ++ VV T+++C + D I
Sbjct: 228 GAETKALKERTVTLGEKLKLRHVLFVPKLKCNLIFVLQLLDDSNLVVQFTNKICAIQDRI 287
Query: 788 SRTVI 802
SR +I
Sbjct: 288 SRMLI 292
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 50.4 bits (119), Expect(3) = 8e-18
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +1
Query: 805 SGEQRDGAYWLQALHSDVWVCHTASTGSSDFWHCRLGHPSHSILS*PMINSIEKIRPNDS 984
+GE+RDG Y+L + V T WH RLGHPS S+LS + S +
Sbjct: 483 TGEERDGVYYLTDAATTT-VHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSR 541
Query: 985 PCDICLKAKHTR 1020
CD+C +AK TR
Sbjct: 542 SCDVCFRAKQTR 553
Score = 48.5 bits (114), Expect(3) = 8e-18
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 659 IHVSNVLYIPHLTCNLLSFAQLTNNRVCVVTLTHRLCVLHDPISRTVI 802
+ +SNVLY+P L C+L+S ++L C+ T +CVL D SRT+I
Sbjct: 434 VSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLI 481
Score = 38.5 bits (88), Expect(3) = 8e-18
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +3
Query: 423 FSNEQWNSMHQLFQSINSPASEMLSGKMF--PLILDTRASYHMTGE 554
F+ +Q + Q+ Q+ N+ S+ LSGKM +ILDT AS+HMTG+
Sbjct: 352 FTPDQLRVITQMIQNKNNGTSDKLSGKMKLGDVILDTGASHHMTGQ 397
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 50.4 bits (119), Expect(3) = 8e-18
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +1
Query: 805 SGEQRDGAYWLQALHSDVWVCHTASTGSSDFWHCRLGHPSHSILS*PMINSIEKIRPNDS 984
+GE+RDG Y+L + V T WH RLGHPS S+LS + S +
Sbjct: 483 TGEERDGVYYLTDAATTT-VHKVDITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSR 541
Query: 985 PCDICLKAKHTR 1020
CD+C +AK TR
Sbjct: 542 SCDVCFRAKQTR 553
Score = 48.5 bits (114), Expect(3) = 8e-18
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 659 IHVSNVLYIPHLTCNLLSFAQLTNNRVCVVTLTHRLCVLHDPISRTVI 802
+ +SNVLY+P L C+L+S ++L C+ T +CVL D SRT+I
Sbjct: 434 VSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLI 481
Score = 38.5 bits (88), Expect(3) = 8e-18
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +3
Query: 423 FSNEQWNSMHQLFQSINSPASEMLSGKMF--PLILDTRASYHMTGE 554
F+ +Q + Q+ Q+ N+ S+ LSGKM +ILDT AS+HMTG+
Sbjct: 352 FTPDQLRVITQMIQNKNNGTSDKLSGKMKLGDVILDTGASHHMTGQ 397
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 52.0 bits (123), Expect(3) = 5e-15
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +1
Query: 805 SGEQRDGAYWLQALHSDVWVC--HTASTGSSD-FWHCRLGHPSHSILS*PMINSIEKIRP 975
SGE+R G Y+L +DV HTA+ S WH RLGHPS S+LS + S
Sbjct: 500 SGEERGGVYYL----TDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPLFSKTSSTV 555
Query: 976 NDSPCDICLKAKHTR 1020
CD+C +AK TR
Sbjct: 556 TSHSCDVCFRAKQTR 570
Score = 45.4 bits (106), Expect(3) = 5e-15
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 659 IHVSNVLYIPHLTCNLLSFAQLTNNRVCVVTLTHRLCVLHDPISRTVI 802
+ ++NVL++P L C L+S ++L C+ T T LC L D S+T+I
Sbjct: 451 VSLTNVLFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLI 498
Score = 30.4 bits (67), Expect(3) = 5e-15
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 384 PTHAQDHQTLGSGFSNEQWNSMHQLFQSINSPASEMLSGK--MFPLILDTRASYHMTG 551
P ++H + S E+ NS S ++ S+ LSGK + +ILD+ AS+HMTG
Sbjct: 361 PEFTEEHMRVLSQLVKEKSNS-----GSTSNNNSDRLSGKTKLGDIILDSGASHHMTG 413
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 48.1 bits (113), Expect(3) = 3e-13
Identities = 26/81 (32%), Positives = 39/81 (48%)
Frame = +2
Query: 560 LFRDXXXXXXXXXXXXXGDTSKAEKA*TLYFGNIHVSNVLYIPHLTCNLLSFAQLTNNRV 739
LF D G T+ A + + + +VLY+P L CNL+ ++LT
Sbjct: 350 LFNDLCDVPPYLVSLPNGSTTIASMEIVILTDKMKLHHVLYVPQLKCNLIVVSKLTIENN 409
Query: 740 CVVTLTHRLCVLHDPISRTVI 802
C+V + +LCV+ D RTVI
Sbjct: 410 CLVIFSDKLCVIQDRTLRTVI 430
Score = 38.5 bits (88), Expect(3) = 3e-13
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 808 GEQRDGAYWLQALHSDVWVCHTASTGSSDFWHCRLGHPSHSILS 939
GEQ DG Y+ +A +T + D WH RLGHPS+ I+S
Sbjct: 433 GEQCDGVYYFKA---QAQANNTHKVDNFDLWHRRLGHPSNKIVS 473
Score = 35.0 bits (79), Expect(3) = 3e-13
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +3
Query: 417 SGFSNEQWNSMHQLFQSINSPASEMLSGKMFPL--ILDTRASYHMTGE 554
+G SN+QW+++ + S N E L+G + + I+DT AS+HM+G+
Sbjct: 301 TGLSNDQWSALLSMLNSHNKN-HEKLAGNILGICWIVDTGASHHMSGD 347