BLASTX nr result

ID: Aconitum21_contig00009027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00009027
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV71172.1| beta-tubulin [Lotus corniculatus]                       98   8e-19
dbj|BAE20248.1| beta-tubulin [Lactuca sativa]                          98   8e-19
sp|Q9ZRB0.1|TBB3_WHEAT RecName: Full=Tubulin beta-3 chain; AltNa...    98   8e-19
sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltNa...    98   8e-19
dbj|BAC42563.1| putative tubulin beta-6 chain [Arabidopsis thali...    98   8e-19

>gb|AAV71172.1| beta-tubulin [Lotus corniculatus]
          Length = 419

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = -3

Query: 411 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 274
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN
Sbjct: 244 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 289



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = -1

Query: 128 ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 3
           ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC
Sbjct: 304 ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 345


>dbj|BAE20248.1| beta-tubulin [Lactuca sativa]
          Length = 282

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = -3

Query: 411 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 274
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN
Sbjct: 132 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 177



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/42 (90%), Positives = 42/42 (100%)
 Frame = -1

Query: 128 ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 3
           ASA++RGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VC
Sbjct: 192 ASAIYRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVC 233


>sp|Q9ZRB0.1|TBB3_WHEAT RecName: Full=Tubulin beta-3 chain; AltName: Full=Beta-3-tubulin
           gi|4098323|gb|AAD10489.1| beta-tubulin 3 [Triticum
           aestivum]
          Length = 445

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = -3

Query: 411 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 274
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -1

Query: 128 ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 3
           ASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVC
Sbjct: 313 ASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVC 354


>sp|P25862.1|TBB1_AVESA RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|16122|emb|CAA38630.1| beta-tubulin [Avena sativa]
          Length = 386

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = -3

Query: 411 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 274
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN
Sbjct: 191 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 236



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = -1

Query: 128 ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 3
           ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC
Sbjct: 251 ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 292


>dbj|BAC42563.1| putative tubulin beta-6 chain [Arabidopsis thaliana]
          Length = 449

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = -3

Query: 411 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 274
           LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = -1

Query: 128 ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 3
           ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC
Sbjct: 313 ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 354


Top