BLASTX nr result

ID: Aconitum21_contig00008983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008983
         (1506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   198   4e-48
ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   182   2e-43
ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like ...   171   5e-40
ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana] gi|7...   169   2e-39
emb|CAN64554.1| hypothetical protein VITISV_007890 [Vitis vinifera]   166   1e-38

>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
            predicted protein [Populus trichocarpa]
          Length = 261

 Score =  198 bits (503), Expect = 4e-48
 Identities = 117/240 (48%), Positives = 148/240 (61%), Gaps = 38/240 (15%)
 Frame = -3

Query: 1468 NQSSNLLDESLGLNTESRVSLPPNRVILIEDCVETSGAFVLHHLIKRLLSIQS-SGVVVF 1292
            N+S NLLDE+LGL+ ++       +V+LIEDCVETSG FVLH L+KR LS QS +  V+F
Sbjct: 3    NRSLNLLDEALGLDYQTDPWPLRGKVVLIEDCVETSGCFVLHQLLKRTLSSQSPNNTVIF 62

Query: 1291 VALAHPFSHYDRILRKQGCNLLSQRENGRFLFFDMLKLVCPD------GSDGMVELYRKL 1130
            +A +HP SHYDRILRK GCNL++QRENGRF FFDMLKL+CPD      G  G   LY K+
Sbjct: 63   LAFSHPLSHYDRILRKLGCNLVAQRENGRFFFFDMLKLLCPDEKEGKTGKGGFTALYWKI 122

Query: 1129 QKTVDLISPESNRNDITIMIDDISLMEVAANGF--*IMSWNHYCQSLN-------FRERH 977
            Q T+  + PE+N+N  TIMIDD+SLMEVAA+G    ++++ HYC +L            H
Sbjct: 123  QNTICAL-PENNKNHATIMIDDMSLMEVAAHGSSDHVLNFMHYCHTLTSELGCSLITLNH 181

Query: 976  SD----------------------KVEPFVTNSAADVHGRLTVLNK*ITDDHGILRNKSS 863
             D                      K EP  T  AADVHG+LTVLN+   +  G  +NK S
Sbjct: 182  EDIYTSMERPTFMLQTKYLVDVLIKAEPLATGLAADVHGQLTVLNRDFCNVKGSSKNKIS 241


>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
            gi|297736457|emb|CBI25328.3| unnamed protein product
            [Vitis vinifera]
          Length = 256

 Score =  182 bits (462), Expect = 2e-43
 Identities = 110/239 (46%), Positives = 144/239 (60%), Gaps = 38/239 (15%)
 Frame = -3

Query: 1468 NQSSNLLDESLGLNTESRVSLPPNRVILIEDCVETSGAFVLHHLIKRLLSIQSSGV--VV 1295
            ++SS LLDE+L L+          RVI+IEDCVET+GAFVLHH++KR L++ +S    V+
Sbjct: 4    HRSSTLLDEALALDWTQP------RVIVIEDCVETNGAFVLHHVLKRSLALHTSSTSAVI 57

Query: 1294 FVALAHPFSHYDRILRKQGCNLLSQRENGRFLFFDMLKLVCPDG-----SDGMVELYRKL 1130
            F+A + PFSHYDRILRK GCNL++ ++N RF+FF++L L CPDG     S G+  LYR++
Sbjct: 58   FLAFSQPFSHYDRILRKLGCNLVTPKDNKRFVFFNLLTLECPDGDEGKTSGGLPSLYREI 117

Query: 1129 QKTVDLISPESNRNDITIMIDDISLMEVAANGF--*IMSWNHYCQSLNFR-------ERH 977
            QK + +   E NR  ITIMIDDISLMEVAANG    ++ + HYC +L            H
Sbjct: 118  QKVI-IALHEENRKSITIMIDDISLMEVAANGSTNHVLDFLHYCHTLTLEFGCLLVTVNH 176

Query: 976  SD----------------------KVEPFVTNSAADVHGRLTVLNK*ITDDHGILRNKS 866
             D                      K EP  T  A DVHG+LTVLNK I +  G  RN++
Sbjct: 177  GDIYSSMERPALLLQMEYLADILIKAEPLSTGLATDVHGQLTVLNKGICEGQGNSRNRT 235


>ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  171 bits (433), Expect = 5e-40
 Identities = 106/235 (45%), Positives = 140/235 (59%), Gaps = 37/235 (15%)
 Frame = -3

Query: 1462 SSNLLDESLGLNTESRVSLPPNRVILIEDCVETSGAFVLHHLIKRLLSI-QSSGVVVFVA 1286
            +SNLLDE++G +  +  +    R++L+EDCVETSGAFVLHHL+KR  S   SS VV+F+A
Sbjct: 5    TSNLLDEAIGFDDPTNPTPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLA 64

Query: 1285 LAHPFSHYDRILRKQGCNLLSQRENGRFLFFDMLKLVCPD------GSDGMVELYRKLQK 1124
             +  F HYDRILRK GCNL +QR++GRF+FFDML L C D      G   +V LY K+Q+
Sbjct: 65   FSQSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLYCKIQR 124

Query: 1123 TVDLISPESNRNDITIMIDDISLMEVAANGF--*IMSWNHYCQ-----------SLNFRE 983
             V  +  E N+  ITI+IDDISL+EVAANG    ++ + HYC            +L+  +
Sbjct: 125  AVHALIQE-NKKHITIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALDHED 183

Query: 982  RHSD-----------------KVEPFVTNSAADVHGRLTVLNK*ITDDHGILRNK 869
             + D                 KV P  T  A DVHG+LTVLNK +      LRN+
Sbjct: 184  VYMDIERPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNR 238


>ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana]
            gi|75154680|sp|Q8L9Y2.1|ELP6_ARATH RecName:
            Full=Elongator complex protein 6; Short=AtELP6; AltName:
            Full=Elongator component 6; AltName: Full=UPF0405 protein
            ELP6 gi|21593728|gb|AAM65695.1| unknown [Arabidopsis
            thaliana] gi|87116610|gb|ABD19669.1| At4g10090
            [Arabidopsis thaliana] gi|110735719|dbj|BAE99839.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332657437|gb|AEE82837.1| elongator protein 6
            [Arabidopsis thaliana]
          Length = 262

 Score =  169 bits (428), Expect = 2e-39
 Identities = 102/241 (42%), Positives = 143/241 (59%), Gaps = 40/241 (16%)
 Frame = -3

Query: 1471 MNQSSNLLDESLGLNTESRVSLPPN-RVILIEDCVETSGAFVLHHLIKRLLSIQSSGVVV 1295
            M++S NLLD +LG + +  +  P N +VILIEDCVETSG+FVLH L+KR+LS  SS  ++
Sbjct: 1    MDRSLNLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSSNSSDALI 60

Query: 1294 FVALAHPFSHYDRILRKQGCNLLSQRENGRFLFFDMLKLVCPDGS------DGMVELYRK 1133
            F+A A PFSHYDRILRK GCNL + + N R +FFDML + C DG         + +L+R+
Sbjct: 61   FLAFARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKLFRE 120

Query: 1132 LQKTVDLISPESNRNDITIMIDDISLMEVA---ANGF*IMSWNHYCQSLNFRE------- 983
            +Q+TV  +   ++ N IT+M+DD+SL+E+A   +N   ++ + HYC +L+          
Sbjct: 121  IQETVRKLQSVTSGN-ITVMVDDMSLLEIATTGSNSDHVLDFLHYCHTLSSESNCSLVIL 179

Query: 982  RHSD----------------------KVEPFVTNSAADVHGRLTVLNK*ITDD-HGILRN 872
             H D                      K EP  +  A DVHG+LTVLNK I++   G  RN
Sbjct: 180  NHEDIYASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRGSSRN 239

Query: 871  K 869
            K
Sbjct: 240  K 240


>emb|CAN64554.1| hypothetical protein VITISV_007890 [Vitis vinifera]
          Length = 321

 Score =  166 bits (420), Expect = 1e-38
 Identities = 100/220 (45%), Positives = 131/220 (59%), Gaps = 38/220 (17%)
 Frame = -3

Query: 1468 NQSSNLLDESLGLNTESRVSLPPNRVILIEDCVETSGAFVLHHLIKRLLSIQSSGV--VV 1295
            ++SS LLDE+L L+          RVI+IEDCVET+GAFVLHH++KR L++ +S    V+
Sbjct: 4    HRSSTLLDEALALDWTQP------RVIVIEDCVETNGAFVLHHVLKRCLALHTSSTSAVI 57

Query: 1294 FVALAHPFSHYDRILRKQGCNLLSQRENGRFLFFDMLKLVCPDG-----SDGMVELYRKL 1130
            F+A + PFSHYDRILRK GCNL++ ++N RF+FF++L L CPDG     S G+  LYR++
Sbjct: 58   FLAFSQPFSHYDRILRKLGCNLVTPKDNKRFVFFNLLTLECPDGDEGKTSGGLPSLYREI 117

Query: 1129 QKTVDLISPESNRNDITIMIDDISLMEVAANGF--*IMSWNHYCQSLNFR-------ERH 977
            QK + +   E NR  ITIMIDDISLMEVAANG    ++ + HYC +L            H
Sbjct: 118  QKVI-IALHEENRKSITIMIDDISLMEVAANGSTNHVLDFLHYCHTLTLEFGCLLVTVNH 176

Query: 976  SD----------------------KVEPFVTNSAADVHGR 923
             D                      K EP  T  A DVHG+
Sbjct: 177  GDIYSSMERPALLLQMEYLADILIKAEPLSTGLATDVHGQ 216


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