BLASTX nr result

ID: Aconitum21_contig00008880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008880
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36128.3| unnamed protein product [Vitis vinifera]               66   5e-09
ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloro...    66   5e-09
ref|XP_002887857.1| hypothetical protein ARALYDRAFT_477281 [Arab...    64   2e-08
gb|AAA84030.1| ribosomal protein S17, partial (chloroplast) [Ara...    63   3e-08
ref|NP_178103.1| 30S ribosomal protein S17 [Arabidopsis thaliana...    63   3e-08

>emb|CBI36128.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 37/58 (63%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -1

Query: 547 QAHDADNQFKVGDVVQLEKSRPISKTKTFIAI---XXXXXXXXXXXXPDLGIPLESAQ 383
           QAHD DNQFKVGDVVQLEKSRPISKTKTF+AI                +L IPLES Q
Sbjct: 131 QAHDPDNQFKVGDVVQLEKSRPISKTKTFVAIPVPNRNRAKSQEAAAGELEIPLESQQ 188


>ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Vitis
           vinifera]
          Length = 145

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 37/58 (63%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -1

Query: 547 QAHDADNQFKVGDVVQLEKSRPISKTKTFIAI---XXXXXXXXXXXXPDLGIPLESAQ 383
           QAHD DNQFKVGDVVQLEKSRPISKTKTF+AI                +L IPLES Q
Sbjct: 87  QAHDPDNQFKVGDVVQLEKSRPISKTKTFVAIPVPNRNRAKSQEAAAGELEIPLESQQ 144


>ref|XP_002887857.1| hypothetical protein ARALYDRAFT_477281 [Arabidopsis lyrata subsp.
           lyrata] gi|297333698|gb|EFH64116.1| hypothetical protein
           ARALYDRAFT_477281 [Arabidopsis lyrata subsp. lyrata]
          Length = 148

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/58 (60%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -1

Query: 547 QAHDADNQFKVGDVVQLEKSRPISKTKTFIAIXXXXXXXXXXXXPD---LGIPLESAQ 383
           QAHD DNQFKVGDVV+LEKSRPISKTK+F+A+                 LGIPLES Q
Sbjct: 89  QAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVVPRAARKAEAGAGDLLGIPLESQQ 146


>gb|AAA84030.1| ribosomal protein S17, partial (chloroplast) [Arabidopsis thaliana]
          Length = 159

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -1

Query: 547 QAHDADNQFKVGDVVQLEKSRPISKTKTFIAIXXXXXXXXXXXXPD---LGIPLESAQ 383
           QAHD DNQFKVGDVV+LEKSRPISKTK+F+A+                 LG+PLES Q
Sbjct: 100 QAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVIARAARKAEAGGDELLGLPLESQQ 157


>ref|NP_178103.1| 30S ribosomal protein S17 [Arabidopsis thaliana]
           gi|133815|sp|P16180.1|RR17_ARATH RecName: Full=30S
           ribosomal protein S17, chloroplastic; AltName:
           Full=CS17; Flags: Precursor
           gi|12324576|gb|AAG52237.1|AC011717_5 30S ribosomal
           protein S17, chloroplast precursor (CS17); 62258-62707
           [Arabidopsis thaliana]
           gi|14423474|gb|AAK62419.1|AF386974_1 30S ribosomal
           protein S17, chloroplast precursor (CS17) [Arabidopsis
           thaliana] gi|16503|emb|CAA77502.1| Plastid ribosomal
           protein CS17 [Arabidopsis thaliana]
           gi|18377576|gb|AAL66954.1| 30S ribosomal protein S17,
           chloroplast precursor (CS17) [Arabidopsis thaliana]
           gi|332198192|gb|AEE36313.1| 30S ribosomal protein S17
           [Arabidopsis thaliana]
          Length = 149

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -1

Query: 547 QAHDADNQFKVGDVVQLEKSRPISKTKTFIAIXXXXXXXXXXXXPD---LGIPLESAQ 383
           QAHD DNQFKVGDVV+LEKSRPISKTK+F+A+                 LG+PLES Q
Sbjct: 90  QAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVIARAARKAEAGGDELLGLPLESQQ 147


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