BLASTX nr result
ID: Aconitum21_contig00008691
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00008691
(872 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [... 133 2e-55
emb|CBI15412.3| unnamed protein product [Vitis vinifera] 132 1e-54
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ... 132 1e-54
ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-... 127 2e-53
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu... 126 5e-53
>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
MSH2, putative [Ricinus communis]
Length = 936
Score = 133 bits (335), Expect(2) = 2e-55
Identities = 66/89 (74%), Positives = 76/89 (85%)
Frame = +3
Query: 393 PSESGKSVEIKNLHDSLSRCGVLLTERKKTEFKSRDLVQDLSRLVKGSIEHVCDLVSSLE 572
P ESGKS+E + LHD+L+RCGV+LTERKK EFK+RDLV+DL RLVKGSIE V DLVS E
Sbjct: 195 PIESGKSIECRTLHDALTRCGVMLTERKKNEFKTRDLVEDLGRLVKGSIEPVRDLVSGFE 254
Query: 573 LASGAPGALISYAELLSNESNYGNYTIEK 659
A GA GAL+SYAELL++ESNYGNYTI K
Sbjct: 255 FAPGALGALLSYAELLADESNYGNYTIRK 283
Score = 109 bits (273), Expect(2) = 2e-55
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +1
Query: 655 KRYNLDIYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTASIGKHLLNRWLKQPFL 834
++YNLD YMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTA +GK LL+ WLKQP L
Sbjct: 282 RKYNLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 341
Query: 835 D 837
D
Sbjct: 342 D 342
>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
Length = 945
Score = 132 bits (332), Expect(2) = 1e-54
Identities = 66/89 (74%), Positives = 77/89 (86%)
Frame = +3
Query: 393 PSESGKSVEIKNLHDSLSRCGVLLTERKKTEFKSRDLVQDLSRLVKGSIEHVCDLVSSLE 572
PSES KS E + LHD+LSRCGV+LTERK+TEFK+RDLVQDL RLVKGSIE V DLVS E
Sbjct: 199 PSESAKSSETRTLHDALSRCGVMLTERKRTEFKARDLVQDLGRLVKGSIEPVRDLVSGFE 258
Query: 573 LASGAPGALISYAELLSNESNYGNYTIEK 659
LA GA G L+SYAELL++ESNYGN+TI++
Sbjct: 259 LAPGALGLLLSYAELLADESNYGNFTIQR 287
Score = 108 bits (269), Expect(2) = 1e-54
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = +1
Query: 640 GTIQ*KRYNLDIYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTASIGKHLLNRWL 819
G +RYNLD YMRLDSAA+RALNVLESKTDANKNFSLFGLMNRTCTA +GK LL+ WL
Sbjct: 281 GNFTIQRYNLDSYMRLDSAAVRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 340
Query: 820 KQPFLD 837
KQP +D
Sbjct: 341 KQPLVD 346
>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
Length = 902
Score = 132 bits (332), Expect(2) = 1e-54
Identities = 66/89 (74%), Positives = 77/89 (86%)
Frame = +3
Query: 393 PSESGKSVEIKNLHDSLSRCGVLLTERKKTEFKSRDLVQDLSRLVKGSIEHVCDLVSSLE 572
PSES KS E + LHD+LSRCGV+LTERK+TEFK+RDLVQDL RLVKGSIE V DLVS E
Sbjct: 159 PSESAKSSETRTLHDALSRCGVMLTERKRTEFKARDLVQDLGRLVKGSIEPVRDLVSGFE 218
Query: 573 LASGAPGALISYAELLSNESNYGNYTIEK 659
LA GA G L+SYAELL++ESNYGN+TI++
Sbjct: 219 LAPGALGLLLSYAELLADESNYGNFTIQR 247
Score = 108 bits (269), Expect(2) = 1e-54
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = +1
Query: 640 GTIQ*KRYNLDIYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTASIGKHLLNRWL 819
G +RYNLD YMRLDSAA+RALNVLESKTDANKNFSLFGLMNRTCTA +GK LL+ WL
Sbjct: 241 GNFTIQRYNLDSYMRLDSAAVRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 300
Query: 820 KQPFLD 837
KQP +D
Sbjct: 301 KQPLVD 306
>ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
gi|449477104|ref|XP_004154930.1| PREDICTED: DNA mismatch
repair protein MSH2-like [Cucumis sativus]
Length = 938
Score = 127 bits (318), Expect(2) = 2e-53
Identities = 63/89 (70%), Positives = 75/89 (84%)
Frame = +3
Query: 393 PSESGKSVEIKNLHDSLSRCGVLLTERKKTEFKSRDLVQDLSRLVKGSIEHVCDLVSSLE 572
P ESGKS +IK LHD L++CGV+LTERKK+EFK RDLVQDLSRL+KGS+E V DLVS E
Sbjct: 199 PLESGKSGDIKPLHDVLTKCGVMLTERKKSEFKMRDLVQDLSRLIKGSVEPVRDLVSGFE 258
Query: 573 LASGAPGALISYAELLSNESNYGNYTIEK 659
A A GAL++YAELL++ESNYGNY I+K
Sbjct: 259 FAPAALGALLAYAELLADESNYGNYNIQK 287
Score = 108 bits (271), Expect(2) = 2e-53
Identities = 53/68 (77%), Positives = 58/68 (85%)
Frame = +1
Query: 640 GTIQ*KRYNLDIYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTASIGKHLLNRWL 819
G ++YNLD YMRLDSAA+RALNVLESKTDANKNFSLFGLMNRTCTA +GK LL+ WL
Sbjct: 281 GNYNIQKYNLDSYMRLDSAAIRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 340
Query: 820 KQPFLDGK 843
KQP LD K
Sbjct: 341 KQPLLDVK 348
>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
gi|296034481|gb|ADG85112.1| mismatch repair protein
[Solanum lycopersicum]
Length = 943
Score = 126 bits (317), Expect(2) = 5e-53
Identities = 60/89 (67%), Positives = 78/89 (87%)
Frame = +3
Query: 393 PSESGKSVEIKNLHDSLSRCGVLLTERKKTEFKSRDLVQDLSRLVKGSIEHVCDLVSSLE 572
P+E+GKS E + L+D++SRCGV++TERKKTEFK RDLVQDL RLVKGS+E V DLVSS E
Sbjct: 199 PTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQDLGRLVKGSVEPVRDLVSSFE 258
Query: 573 LASGAPGALISYAELLSNESNYGNYTIEK 659
A+GA G ++SYAELL+++SNYGNYT+++
Sbjct: 259 CAAGALGCILSYAELLADDSNYGNYTVKQ 287
Score = 108 bits (269), Expect(2) = 5e-53
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +1
Query: 655 KRYNLDIYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTASIGKHLLNRWLKQPFL 834
K+YNLD YMRLDSAAMRALNV+ESK+DANKNFSLFGLMNRTCTA +GK LL+ WLKQP L
Sbjct: 286 KQYNLDSYMRLDSAAMRALNVMESKSDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 345
Query: 835 D 837
D
Sbjct: 346 D 346