BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008601
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   205   3e-51
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu...   197   6e-49
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab...   197   7e-49
dbj|BAD43030.1| putative double strand break repair protein (XRC...   195   3e-48
ref|NP_188951.2| DNA repair protein XRCC4 [Arabidopsis thaliana]...   195   3e-48

>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  205 bits (522), Expect = 3e-51
 Identities = 95/137 (69%), Positives = 115/137 (83%)
 Frame = -3

Query: 412 DSTRHTCLRLELTDGEAIFIRGCWFHSHFTLSITDGLNAWICNASEEEVEERADQWDQSV 233
           ++ RHTCL+LE+T  E IF++G WF SHF LSITDGLNAW+CNA+E +V+ERA QWDQ V
Sbjct: 11  ETARHTCLKLEIT--EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQWDQPV 68

Query: 232 SDYIQTAEKYLGFRQPGSNYAFSHAENGFKRLSWTFEKQGIKLEWRWKCKPSSENRITTA 53
           S+YI  AE YLGF+QPGS Y F+ A +  KRLSWTFEK+G KLEWRWKC+PS +N++TTA
Sbjct: 69  SEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNKMTTA 128

Query: 52  EILNFLMDANIRLSEEV 2
            IL+FLMDANIRLSEEV
Sbjct: 129 GILDFLMDANIRLSEEV 145


>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
           gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
           protein XRCC4-like [Cucumis sativus]
          Length = 233

 Score =  197 bits (502), Expect = 6e-49
 Identities = 91/144 (63%), Positives = 114/144 (79%), Gaps = 6/144 (4%)
 Frame = -3

Query: 415 MDSTRHTCLRLEL------TDGEAIFIRGCWFHSHFTLSITDGLNAWICNASEEEVEERA 254
           MD+ RHTCL+LE+       +  +IF++G W H  F LSITDG +AW C+A+E+EV  RA
Sbjct: 1   MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRA 60

Query: 253 DQWDQSVSDYIQTAEKYLGFRQPGSNYAFSHAENGFKRLSWTFEKQGIKLEWRWKCKPSS 74
            QWDQ  SDY+  AE+YLGF+QPGS Y F+ A NG+KRLSWTF+K+G+KLEWRWKC+P+S
Sbjct: 61  AQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKLEWRWKCQPAS 120

Query: 73  ENRITTAEILNFLMDANIRLSEEV 2
           +N+ TTA ILNFLMDANIRLSEEV
Sbjct: 121 DNKTTTAGILNFLMDANIRLSEEV 144


>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
           lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
           ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  197 bits (501), Expect = 7e-49
 Identities = 87/137 (63%), Positives = 112/137 (81%)
 Frame = -3

Query: 412 DSTRHTCLRLELTDGEAIFIRGCWFHSHFTLSITDGLNAWICNASEEEVEERADQWDQSV 233
           + T+HTCLRLE++  + IF++G W +SHF +S+TDG ++WICNA+EEEV ERA QWDQ V
Sbjct: 5   EKTKHTCLRLEISGADPIFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERAAQWDQPV 64

Query: 232 SDYIQTAEKYLGFRQPGSNYAFSHAENGFKRLSWTFEKQGIKLEWRWKCKPSSENRITTA 53
           S+Y++ AE+YLGF+QP S Y FS A  G KRLSWTFEK+G KLEWRWKCKPS +++  T 
Sbjct: 65  SEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSHDSKKITV 124

Query: 52  EILNFLMDANIRLSEEV 2
            IL+FL++ANIRLSEEV
Sbjct: 125 GILDFLLEANIRLSEEV 141


>dbj|BAD43030.1| putative double strand break repair protein (XRCC4) [Arabidopsis
           thaliana] gi|56461768|gb|AAV91340.1| At1g61410
           [Arabidopsis thaliana] gi|61656135|gb|AAX49370.1|
           At1g61410 [Arabidopsis thaliana]
          Length = 248

 Score =  195 bits (496), Expect = 3e-48
 Identities = 87/137 (63%), Positives = 112/137 (81%)
 Frame = -3

Query: 412 DSTRHTCLRLELTDGEAIFIRGCWFHSHFTLSITDGLNAWICNASEEEVEERADQWDQSV 233
           + T+HTCLRLE++  + IF++G W +S F +S+TDG ++WICNA+EEEV ERA QWDQ V
Sbjct: 5   EKTKHTCLRLEISGADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAAQWDQPV 64

Query: 232 SDYIQTAEKYLGFRQPGSNYAFSHAENGFKRLSWTFEKQGIKLEWRWKCKPSSENRITTA 53
           S+Y++ AE+YLGF+QP S Y+FS A  G KRLSWTFEK+G KLEWRWKCKPS +++  T 
Sbjct: 65  SEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDDSKKITV 124

Query: 52  EILNFLMDANIRLSEEV 2
            IL+FLM+ANIRLSEEV
Sbjct: 125 GILDFLMEANIRLSEEV 141


>ref|NP_188951.2| DNA repair protein XRCC4 [Arabidopsis thaliana]
           gi|238479872|ref|NP_001154639.1| DNA repair protein
           XRCC4 [Arabidopsis thaliana]
           gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
           repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
           putative double strand break repair protein [Arabidopsis
           thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643196|gb|AEE76717.1| DNA repair protein XRCC4
           [Arabidopsis thaliana] gi|332643197|gb|AEE76718.1| DNA
           repair protein XRCC4 [Arabidopsis thaliana]
          Length = 264

 Score =  195 bits (496), Expect = 3e-48
 Identities = 87/137 (63%), Positives = 112/137 (81%)
 Frame = -3

Query: 412 DSTRHTCLRLELTDGEAIFIRGCWFHSHFTLSITDGLNAWICNASEEEVEERADQWDQSV 233
           + T+HTCLRLE++  + IF++G W +S F +S+TDG ++WICNA+EEEV ERA QWDQ V
Sbjct: 21  EKTKHTCLRLEISGADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAAQWDQPV 80

Query: 232 SDYIQTAEKYLGFRQPGSNYAFSHAENGFKRLSWTFEKQGIKLEWRWKCKPSSENRITTA 53
           S+Y++ AE+YLGF+QP S Y+FS A  G KRLSWTFEK+G KLEWRWKCKPS +++  T 
Sbjct: 81  SEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDDSKKITV 140

Query: 52  EILNFLMDANIRLSEEV 2
            IL+FLM+ANIRLSEEV
Sbjct: 141 GILDFLMEANIRLSEEV 157