BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008600
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   334   3e-89
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   332   9e-89
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              332   9e-89
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         325   2e-86
ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82

>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
            gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
            putative [Ricinus communis]
          Length = 265

 Score =  334 bits (856), Expect = 3e-89
 Identities = 168/254 (66%), Positives = 206/254 (81%), Gaps = 3/254 (1%)
 Frame = -2

Query: 1224 ESTRHSCLRLELTDGEAIFIRGSWFHSHFALSITDGLNAWICNASEEQVEERADQWDQSV 1045
            E+ RH+CL+LE+T  E IF++G+WF SHF LSITDGLNAW+CNA+E QV+ERA QWDQ V
Sbjct: 11   ETARHTCLKLEIT--EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQWDQPV 68

Query: 1044 SDYIQTAEKYLGFRQPGSNYAFSDADDGGFKRLSWTFEKQGIKLEWRWKCKPSTQNRITT 865
            S+YI  AE YLGF+QPGS Y F+DA D   KRLSWTFEK+G KLEWRWKC+PS  N++TT
Sbjct: 69   SEYINLAEHYLGFQQPGSIYRFADAGDS-HKRLSWTFEKEGTKLEWRWKCQPSPDNKMTT 127

Query: 864  AEILDFLMDANIRLSEEVVRKTQSFERLKVEAEKCLSQSEKFSSDKAEFESAIYGKFVAV 685
            A ILDFLMDANIRLSEEVV+KT SFERLK EA+KCL+QSE+F+ +K EFES+IY KF+AV
Sbjct: 128  AGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAKFLAV 187

Query: 684  LNSKKAKLRELRDQLLKQEDAGKSPQ--EDVSSQRTESYDEE-SDNKKNGEEAVESRAGT 514
            LNSKK KLR+LRDQL K+E +GK PQ  E+ S+ +TES++E+ SD  K+ EE  E   GT
Sbjct: 188  LNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEPPEKVTGT 247

Query: 513  SKGGPAARQPGRKR 472
            S+  P++R  GRKR
Sbjct: 248  SEDKPSSRGRGRKR 261


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  332 bits (852), Expect = 9e-89
 Identities = 172/255 (67%), Positives = 206/255 (80%), Gaps = 3/255 (1%)
 Frame = -2

Query: 1227 MEST-RHSCLRLELTD-GEAIFIRGSWFHSHFALSITDGLNAWICNASEEQVEERADQWD 1054
            ME T RHSCL+L++ +  E IFI+ +WF SHF LSITDGL+AW+CNASE++V ERA QWD
Sbjct: 1    MEPTPRHSCLKLQIPNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 1053 QSVSDYIQTAEKYLGFRQPGSNYAFSDADDGGFKRLSWTFEKQGIKLEWRWKCKPSTQNR 874
            Q VSDYI  AE++LGF+QPGS Y FSDA DG  +RLSWTFEK+G KLEWRWKC  S  +R
Sbjct: 61   QPVSDYIALAERFLGFQQPGSVYGFSDAGDG-HRRLSWTFEKEGTKLEWRWKCGLSPDSR 119

Query: 873  ITTAEILDFLMDANIRLSEEVVRKTQSFERLKVEAEKCLSQSEKFSSDKAEFESAIYGKF 694
             TTA +LDFLM+ANIRLSEEVV KTQSFERLKVEAEKCL+QSEKF+++KAEFESAIY KF
Sbjct: 120  STTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKF 179

Query: 693  VAVLNSKKAKLRELRDQLLKQEDAGKSPQ-EDVSSQRTESYDEESDNKKNGEEAVESRAG 517
            + VLNSKKAKLRELRDQ+ K+E  GK PQ ED S+ +T S+D+ESDN+   EE+ ++  G
Sbjct: 180  LGVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEESSKNLTG 239

Query: 516  TSKGGPAARQPGRKR 472
            TSK    +R  GRKR
Sbjct: 240  TSKHVSTSRPRGRKR 254


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  332 bits (852), Expect = 9e-89
 Identities = 172/255 (67%), Positives = 206/255 (80%), Gaps = 3/255 (1%)
 Frame = -2

Query: 1227 MEST-RHSCLRLELTD-GEAIFIRGSWFHSHFALSITDGLNAWICNASEEQVEERADQWD 1054
            ME T RHSCL+L++ +  E IFI+ +WF SHF LSITDGL+AW+CNASE++V ERA QWD
Sbjct: 1    MEPTPRHSCLKLQIPNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 1053 QSVSDYIQTAEKYLGFRQPGSNYAFSDADDGGFKRLSWTFEKQGIKLEWRWKCKPSTQNR 874
            Q VSDYI  AE++LGF+QPGS Y FSDA DG  +RLSWTFEK+G KLEWRWKC  S  +R
Sbjct: 61   QPVSDYIALAERFLGFQQPGSVYGFSDAGDG-HRRLSWTFEKEGTKLEWRWKCGLSPDSR 119

Query: 873  ITTAEILDFLMDANIRLSEEVVRKTQSFERLKVEAEKCLSQSEKFSSDKAEFESAIYGKF 694
             TTA +LDFLM+ANIRLSEEVV KTQSFERLKVEAEKCL+QSEKF+++KAEFESAIY KF
Sbjct: 120  STTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAKF 179

Query: 693  VAVLNSKKAKLRELRDQLLKQEDAGKSPQ-EDVSSQRTESYDEESDNKKNGEEAVESRAG 517
            + VLNSKKAKLRELRDQ+ K+E  GK PQ ED S+ +T S+D+ESDN+   EE+ ++  G
Sbjct: 180  LGVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEESSKNLTG 239

Query: 516  TSKGGPAARQPGRKR 472
            TSK    +R  GRKR
Sbjct: 240  TSKHVSTSRPRGRKR 254


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  325 bits (833), Expect = 2e-86
 Identities = 169/257 (65%), Positives = 200/257 (77%), Gaps = 2/257 (0%)
 Frame = -2

Query: 1227 MEST--RHSCLRLELTDGEAIFIRGSWFHSHFALSITDGLNAWICNASEEQVEERADQWD 1054
            MEST  RH+CL+LE+   E IFI+G+WF  HF LSITDGLN+W CNA+EE+V  RA QWD
Sbjct: 1    MESTMARHTCLKLEIP--EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQWD 58

Query: 1053 QSVSDYIQTAEKYLGFRQPGSNYAFSDADDGGFKRLSWTFEKQGIKLEWRWKCKPSTQNR 874
            Q VS YIQ AEK+LGF+ PGS Y F+DA +G  KRLSWTFEK+G KLEWRWKC+PS   +
Sbjct: 59   QPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGN-KRLSWTFEKEGTKLEWRWKCQPSPDTK 117

Query: 873  ITTAEILDFLMDANIRLSEEVVRKTQSFERLKVEAEKCLSQSEKFSSDKAEFESAIYGKF 694
             TT  ILDFLMDANIRLSEEVVRKTQSFERLK EAEKCL+QSEKF+S K EFE+A+Y KF
Sbjct: 118  KTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAKF 177

Query: 693  VAVLNSKKAKLRELRDQLLKQEDAGKSPQEDVSSQRTESYDEESDNKKNGEEAVESRAGT 514
            + VLNSKK KLRELRDQL K+E +G+S QE   S +TES+D  SD++K+ E+  E  AGT
Sbjct: 178  LGVLNSKKRKLRELRDQLSKKEISGESAQEGEDSDKTESFDRGSDDEKSVEKPREKLAGT 237

Query: 513  SKGGPAARQPGRKRKSH 463
            SK  P  R   RK+ +H
Sbjct: 238  SKDPPPRRGYVRKKITH 254


>ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|222864766|gb|EEF01897.1|
            predicted protein [Populus trichocarpa]
          Length = 233

 Score =  311 bits (797), Expect = 2e-82
 Identities = 158/235 (67%), Positives = 190/235 (80%), Gaps = 2/235 (0%)
 Frame = -2

Query: 1227 MEST--RHSCLRLELTDGEAIFIRGSWFHSHFALSITDGLNAWICNASEEQVEERADQWD 1054
            MEST  RH+CL+LE+   E IFI+G+WF  HF LSITDGLN+W CNA+EE+V +RA QWD
Sbjct: 1    MESTMARHTCLKLEIP--EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAAQWD 58

Query: 1053 QSVSDYIQTAEKYLGFRQPGSNYAFSDADDGGFKRLSWTFEKQGIKLEWRWKCKPSTQNR 874
            Q VS YIQ AEK+LGF+ PGS Y F+DA +G  KRLSWTFEK+G KLEWRWKC+PS   +
Sbjct: 59   QPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGN-KRLSWTFEKEGTKLEWRWKCQPSPDTK 117

Query: 873  ITTAEILDFLMDANIRLSEEVVRKTQSFERLKVEAEKCLSQSEKFSSDKAEFESAIYGKF 694
             TT  ILDFLMDANIRLSEEVVRKTQSFE+LK EAEKCL+QSEKF+S K EFE+A+Y KF
Sbjct: 118  KTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAKF 177

Query: 693  VAVLNSKKAKLRELRDQLLKQEDAGKSPQEDVSSQRTESYDEESDNKKNGEEAVE 529
            + VLNSKK KLRELRDQL K+E +G+S QE+  S +TES+D  SD++K+ E+  E
Sbjct: 178  LGVLNSKKRKLRELRDQLSKKEISGESAQEEEDSDKTESFDRGSDDEKSVEKPRE 232