BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008523
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   484   e-134
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              468   e-129
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   466   e-129
ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|2...   466   e-129
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   444   e-122

>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  484 bits (1246), Expect = e-134
 Identities = 246/357 (68%), Positives = 279/357 (78%), Gaps = 6/357 (1%)
 Frame = +1

Query: 145  SSSSPPTT---EFNITFGSXXXXXXXXXXXXSIPLLIPWIVRGEDGNXXXXXXXXXXXXH 315
            SS SPP+T   EFNI+F              S  LLIPWIVR E+GN             
Sbjct: 41   SSISPPSTTSAEFNISFAPKSKNPKPQ----SETLLIPWIVRDENGNLRVQSTPPERYLQ 96

Query: 316  DXXXXXXXXXXXXXXXXNPLLTS---EPKFSKAARRFYNENFRDPPQRLSKVLAASGVAS 486
            D                     +   EPK+SKAARRFYNENFRDPPQRLSKVLAA+GVAS
Sbjct: 97   DMAKAKALSAKKKKKKEESTARAVAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVAS 156

Query: 487  RRSCEELVFAGKVTVNGSVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKGYI 666
            RR+ EEL+F G+VTVNGSVCNTPQTRVDPARDMIYVNGNR+ KKLPPKVYLALNKPKGYI
Sbjct: 157  RRNSEELIFEGRVTVNGSVCNTPQTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYI 216

Query: 667  CSNGEKESKSVMTLIDDYFKGWNRINPGFPKPRLFTVGRLDVATTGLIVITNDGDFAQRI 846
            CS+GEKESKSV+ L DDY K WN+ NPG PKPR+FTVGRLDVATTGLI++TNDGDFAQ++
Sbjct: 217  CSSGEKESKSVLCLFDDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKL 276

Query: 847  SHPSSGLSKEYIAAVEGAVSKRQLVAIVEGTTIDGVHCKPDSVELLPQQPDMSRPRIRIV 1026
            SHPSS LSKEYIA ++G V+KR L+AI EGT I+GVHC PDSVELLP QP++S+PR+R+V
Sbjct: 277  SHPSSKLSKEYIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVV 336

Query: 1027 VHEGRNHEVRELVKNAGLTLHSLKRVRIGGFRLPSDLGLGKHIELKQGDLKSLGGKS 1197
            VHEGRNHEVRELVK+AGL +HSLKR+RIGGFRLPSDLG GKH+ELKQGDLK+LG KS
Sbjct: 337  VHEGRNHEVRELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALGWKS 393


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  468 bits (1205), Expect = e-129
 Identities = 222/271 (81%), Positives = 251/271 (92%)
 Frame = +1

Query: 385  EPKFSKAARRFYNENFRDPPQRLSKVLAASGVASRRSCEELVFAGKVTVNGSVCNTPQTR 564
            EPK+SKAARRFYNENFRDPPQRLSKVLAA+GVASRR+ EEL+F G+VTVNGSVCNTPQTR
Sbjct: 26   EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 85

Query: 565  VDPARDMIYVNGNRISKKLPPKVYLALNKPKGYICSNGEKESKSVMTLIDDYFKGWNRIN 744
            VDPARDMIYVNGNR+ KKLPPKVYLALNKPKGYICS+GEKESKSV+ L DDY K WN+ N
Sbjct: 86   VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 145

Query: 745  PGFPKPRLFTVGRLDVATTGLIVITNDGDFAQRISHPSSGLSKEYIAAVEGAVSKRQLVA 924
            PG PKPR+FTVGRLDVATTGLI++TNDGDFAQ++SHPSS LSKEYIA ++G V+KR L+A
Sbjct: 146  PGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIA 205

Query: 925  IVEGTTIDGVHCKPDSVELLPQQPDMSRPRIRIVVHEGRNHEVRELVKNAGLTLHSLKRV 1104
            I EGT I+GVHC PDSVELLP QP++S+PR+R+VVHEGRNHEVRELVK+AGL +HSLKR+
Sbjct: 206  ISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRI 265

Query: 1105 RIGGFRLPSDLGLGKHIELKQGDLKSLGGKS 1197
            RIGGFRLPSDLG GKH+ELKQGDLK+LG KS
Sbjct: 266  RIGGFRLPSDLGHGKHVELKQGDLKALGWKS 296


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  466 bits (1200), Expect = e-129
 Identities = 241/359 (67%), Positives = 271/359 (75%), Gaps = 8/359 (2%)
 Frame = +1

Query: 145  SSSSPPTTEFNITFG--------SXXXXXXXXXXXXSIPLLIPWIVRGEDGNXXXXXXXX 300
            SSSS  + EFNITF                         L IPWIVRGEDGN        
Sbjct: 41   SSSSSSSLEFNITFAPPKPKPKSEVEDPFQFIDRNSGGQLFIPWIVRGEDGNLKLQSHPP 100

Query: 301  XXXXHDXXXXXXXXXXXXXXXXNPLLTSEPKFSKAARRFYNENFRDPPQRLSKVLAASGV 480
                H                  P+ T  PK SKAARRFYNEN R+  QRLSKVLAA+GV
Sbjct: 101  TRFLHSVSEDETKPKKKKVSAGKPI-TEPPKHSKAARRFYNENIRESSQRLSKVLAAAGV 159

Query: 481  ASRRSCEELVFAGKVTVNGSVCNTPQTRVDPARDMIYVNGNRISKKLPPKVYLALNKPKG 660
            ASRRS EEL+F G+VTVNGSVCNTPQTRVDPARD+IYVNGNR+ KKLPPKVYLALNKPKG
Sbjct: 160  ASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKG 219

Query: 661  YICSNGEKESKSVMTLIDDYFKGWNRINPGFPKPRLFTVGRLDVATTGLIVITNDGDFAQ 840
            YICS+G+KESKSV++L DDY K W++  PG PKPRLFTVGRLDVATTGLI++TNDGDFAQ
Sbjct: 220  YICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQ 279

Query: 841  RISHPSSGLSKEYIAAVEGAVSKRQLVAIVEGTTIDGVHCKPDSVELLPQQPDMSRPRIR 1020
             ISHPSSGLSKEYIAA++G VSK+ L+AI EGT IDGVHC PDSVELLP+QPD+S+ R+R
Sbjct: 280  GISHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDISKSRLR 339

Query: 1021 IVVHEGRNHEVRELVKNAGLTLHSLKRVRIGGFRLPSDLGLGKHIELKQGDLKSLGGKS 1197
            IVVHEGRNHEVRELVK AGL ++SLKRVRIGGFRLPSDLGLG + ELKQ +LK++G KS
Sbjct: 340  IVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLGLGSYTELKQSELKAIGWKS 398


>ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|222851815|gb|EEE89362.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  466 bits (1200), Expect = e-129
 Identities = 249/379 (65%), Positives = 274/379 (72%), Gaps = 16/379 (4%)
 Frame = +1

Query: 106  KPARKLLPPLIRCSSSSPPTTEFNITFG------SXXXXXXXXXXXXSIP---LLIPWIV 258
            KP+  LL   IR +  +  + EFNITF                    S+P   L IPWIV
Sbjct: 19   KPSLSLLNKSIRPTRITA-SLEFNITFAPPKPKPKLPANLQTDAASLSLPPGQLFIPWIV 77

Query: 259  RGEDGNXXXXXXXXXXXXH-------DXXXXXXXXXXXXXXXXNPLLTSEPKFSKAARRF 417
            RGEDGN            H                           L +EP  SKAARRF
Sbjct: 78   RGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDKVKKESSGNVKAKLEAEPTRSKAARRF 137

Query: 418  YNENFRDPPQRLSKVLAASGVASRRSCEELVFAGKVTVNGSVCNTPQTRVDPARDMIYVN 597
            YNENFRD  QRLSKVLAA+GVASRRS E L+F GKVTVNGSVCNTPQTRVDP RD IYVN
Sbjct: 138  YNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRVDPGRDSIYVN 197

Query: 598  GNRISKKLPPKVYLALNKPKGYICSNGEKESKSVMTLIDDYFKGWNRINPGFPKPRLFTV 777
            GNR+ KKLPPK+Y+ALNKPKGYICS GEKESKSVM L+DDYF+ W++ NPG PKPRLFTV
Sbjct: 198  GNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSWDKRNPGLPKPRLFTV 257

Query: 778  GRLDVATTGLIVITNDGDFAQRISHPSSGLSKEYIAAVEGAVSKRQLVAIVEGTTIDGVH 957
            GRLDVATTGLI++TNDGDFAQ+I+HPSS LSKEYIA V+G VSKR L A+ EGT I+GV 
Sbjct: 258  GRLDVATTGLIIVTNDGDFAQQIAHPSSNLSKEYIATVDGVVSKRHLFAVSEGTVIEGVR 317

Query: 958  CKPDSVELLPQQPDMSRPRIRIVVHEGRNHEVRELVKNAGLTLHSLKRVRIGGFRLPSDL 1137
            C PDSVELLPQQPD  RPR+RIVVHEGRNHEVRELVKNAGL +HSLKRVRIGGFRLPSDL
Sbjct: 318  CVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPSDL 377

Query: 1138 GLGKHIELKQGDLKSLGGK 1194
            GLGKH ELKQ DLK+LG K
Sbjct: 378  GLGKHAELKQTDLKTLGWK 396


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 412

 Score =  444 bits (1142), Expect = e-122
 Identities = 233/379 (61%), Positives = 271/379 (71%), Gaps = 25/379 (6%)
 Frame = +1

Query: 136  IRCS---SSSPPTTEFNITFGSXXXXXXXXXXXXSIP-LLIPWIVRGEDGNXXXXXXXXX 303
            +RCS   SSS    EF+I+F              +   L IPWIVRG+DG          
Sbjct: 34   LRCSVSSSSSSEPIEFDISFAPPKPKPSSTRGGATPQQLFIPWIVRGDDGTLKLQSQPPA 93

Query: 304  XXXHDXXXXXXXXXXXXXXXXN---PLLTS------------------EPKFSKAARRFY 420
               H+                    P  TS                  +PK SKAARRFY
Sbjct: 94   RLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATASASSPASHSEVKPKLSKAARRFY 153

Query: 421  NENFRDPPQRLSKVLAASGVASRRSCEELVFAGKVTVNGSVCNTPQTRVDPARDMIYVNG 600
            NENF++PPQRLSKVLAA+GVASRR+ EEL+F GKVTVNG +CNTPQTRVDP+RD+IYVNG
Sbjct: 154  NENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNG 213

Query: 601  NRISKKLPPKVYLALNKPKGYICSNGEKESKSVMTLIDDYFKGWNRINPGFPKPRLFTVG 780
            NRI KKLPPKVY ALNKPKGYICS+GEKE KSV++L D+Y   W++ NPG PKPRLFTVG
Sbjct: 214  NRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLFDEYLSSWDKRNPGTPKPRLFTVG 273

Query: 781  RLDVATTGLIVITNDGDFAQRISHPSSGLSKEYIAAVEGAVSKRQLVAIVEGTTIDGVHC 960
            RLDVATTGLIV+TNDGDFAQ++SHPSS L KEYI  V G + KR L+AI EGT ++GVHC
Sbjct: 274  RLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTIVEGVHC 333

Query: 961  KPDSVELLPQQPDMSRPRIRIVVHEGRNHEVRELVKNAGLTLHSLKRVRIGGFRLPSDLG 1140
             PDSVEL+P+Q D+ R R+RIVVHEGRNHEVRELVKNAGL +HSLKRVRIGGFRLPSDLG
Sbjct: 334  VPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLG 393

Query: 1141 LGKHIELKQGDLKSLGGKS 1197
            LGKH+ELKQ +LK++G K+
Sbjct: 394  LGKHVELKQSELKAMGWKN 412