BLASTX nr result
ID: Aconitum21_contig00008398
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00008398
(599 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin... 183 8e-70
ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interactin... 177 2e-67
ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin... 174 4e-67
ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interactin... 174 2e-66
ref|XP_003594504.1| Pre-mRNA-processing factor [Medicago truncat... 181 9e-66
>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
[Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
protein product [Vitis vinifera]
Length = 519
Score = 183 bits (464), Expect(2) = 8e-70
Identities = 94/144 (65%), Positives = 114/144 (79%), Gaps = 5/144 (3%)
Frame = +1
Query: 181 GHQAEVLSIDCLRKERVLSVGRDRTLRFGKVPEGAQLVFRAPAASLECCAFISSDEFISG 360
GHQ+EVLSIDCLRKERVL+VGRDR+++ KVPE ++LVFRAPA+SLECC FI++DEF+SG
Sbjct: 307 GHQSEVLSIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSG 366
Query: 361 SDDGSIELWNTIRKKPAFIVKNAHPAVA----PNVMEDEGLPNGDHQDNGSTKTNSY-CS 525
SDDGSIELW +RKKP +IVKNAH A P + +PNG + +NG+ Y CS
Sbjct: 367 SDDGSIELWGMLRKKPVYIVKNAHALSATLRQPEQSDVGKIPNG-YIENGNHNHEDYNCS 425
Query: 526 SALSWVSAVTVCRSSDLAASGAGN 597
+A SWVS+VTVCRSSDLAASGA N
Sbjct: 426 TAYSWVSSVTVCRSSDLAASGAAN 449
Score = 106 bits (265), Expect(2) = 8e-70
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = +2
Query: 2 RHVHIWDSRTRQHIRALRGHKGPVSCLTFRQGTSELFSGSFDGTIKSWNAEDRSYVDDLQ 181
RHVH+WD+RTR+H+RA GH+GPVSCLTFRQGTSELFSGSFD TIK W+AEDR+Y+ L
Sbjct: 247 RHVHLWDTRTREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLF 306
Query: 182 G 184
G
Sbjct: 307 G 307
>ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like
[Cucumis sativus]
Length = 494
Score = 177 bits (449), Expect(2) = 2e-67
Identities = 85/143 (59%), Positives = 114/143 (79%), Gaps = 4/143 (2%)
Frame = +1
Query: 181 GHQAEVLSIDCLRKERVLSVGRDRTLRFGKVPEGAQLVFRAPAASLECCAFISSDEFISG 360
GHQ++VL+IDCLRKER+L+VGRDR+++ KVPE ++LVFRAPA+SLECC FIS+DEF+SG
Sbjct: 293 GHQSDVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSG 352
Query: 361 SDDGSIELWNTIRKKPAFIVKNAHPAVAPN----VMEDEGLPNGDHQDNGSTKTNSYCSS 528
SDDGSIELW ++KKP FIV+NAH + + + + E+ +PNG + + S+ S
Sbjct: 353 SDDGSIELWTALKKKPVFIVRNAHSSSSSSTNLELKENGAIPNGCMGNGDANHNTSHNLS 412
Query: 529 ALSWVSAVTVCRSSDLAASGAGN 597
A SW+S+V+VCR+SDLAASGAGN
Sbjct: 413 AYSWISSVSVCRNSDLAASGAGN 435
Score = 104 bits (260), Expect(2) = 2e-67
Identities = 44/61 (72%), Positives = 54/61 (88%)
Frame = +2
Query: 2 RHVHIWDSRTRQHIRALRGHKGPVSCLTFRQGTSELFSGSFDGTIKSWNAEDRSYVDDLQ 181
RHVHIWD+RTR+HI+A GH+GPVSCLTFRQGTSELFSGS+D T+K WN +DR+Y++ L
Sbjct: 233 RHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLF 292
Query: 182 G 184
G
Sbjct: 293 G 293
>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
[Vitis vinifera]
Length = 500
Score = 174 bits (441), Expect(2) = 4e-67
Identities = 89/139 (64%), Positives = 108/139 (77%)
Frame = +1
Query: 181 GHQAEVLSIDCLRKERVLSVGRDRTLRFGKVPEGAQLVFRAPAASLECCAFISSDEFISG 360
GHQ+EVLSIDCLRKERVL+VGRDR+++ KVPE ++LVFRAPA+SLECC FI++DEF+SG
Sbjct: 307 GHQSEVLSIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFINNDEFLSG 366
Query: 361 SDDGSIELWNTIRKKPAFIVKNAHPAVAPNVMEDEGLPNGDHQDNGSTKTNSYCSSALSW 540
SDDGSIELW +RKKP +IVKNAH A++ + + E N CS+A SW
Sbjct: 367 SDDGSIELWGMLRKKPVYIVKNAH-ALSATLRQPE--------------QNYNCSTAYSW 411
Query: 541 VSAVTVCRSSDLAASGAGN 597
VS+VTVCRSSDLAASGA N
Sbjct: 412 VSSVTVCRSSDLAASGAAN 430
Score = 106 bits (265), Expect(2) = 4e-67
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = +2
Query: 2 RHVHIWDSRTRQHIRALRGHKGPVSCLTFRQGTSELFSGSFDGTIKSWNAEDRSYVDDLQ 181
RHVH+WD+RTR+H+RA GH+GPVSCLTFRQGTSELFSGSFD TIK W+AEDR+Y+ L
Sbjct: 247 RHVHLWDTRTREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAEDRAYITSLF 306
Query: 182 G 184
G
Sbjct: 307 G 307
>ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like
isoform 1 [Glycine max]
Length = 496
Score = 174 bits (441), Expect(2) = 2e-66
Identities = 85/143 (59%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
Frame = +1
Query: 181 GHQAEVLSIDCLRKERVLSVGRDRTLRFGKVPEGAQLVFRAPAASLECCAFISSDEFISG 360
GHQ+EVLSIDCLRKERVL+ GRDR+++ KV E ++LVFRAPA+SLECC F+ +DE SG
Sbjct: 285 GHQSEVLSIDCLRKERVLTAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVGNDELFSG 344
Query: 361 SDDGSIELWNTIRKKPAFIVKNAHPAVAPNVMED----EGLPNGDHQDNGSTKTNSYCSS 528
SDDGSIELW +RKKP +I++NAH ++ D E LPNG+ ++ + + +C S
Sbjct: 345 SDDGSIELWTVMRKKPIYILRNAHALPVDSMKSDQKDSEKLPNGNLENGYNHPKDHHCLS 404
Query: 529 ALSWVSAVTVCRSSDLAASGAGN 597
SWVSAV+VCR+SDLAASGAGN
Sbjct: 405 VFSWVSAVSVCRNSDLAASGAGN 427
Score = 103 bits (258), Expect(2) = 2e-66
Identities = 44/61 (72%), Positives = 53/61 (86%)
Frame = +2
Query: 2 RHVHIWDSRTRQHIRALRGHKGPVSCLTFRQGTSELFSGSFDGTIKSWNAEDRSYVDDLQ 181
RH+HIWD+RTR+H+++ GH+GPVSCLTFRQGTSELFSGSFD TIK WN EDR+Y+ L
Sbjct: 225 RHIHIWDTRTREHLQSFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWNVEDRTYMSTLF 284
Query: 182 G 184
G
Sbjct: 285 G 285
>ref|XP_003594504.1| Pre-mRNA-processing factor [Medicago truncatula]
gi|355483552|gb|AES64755.1| Pre-mRNA-processing factor
[Medicago truncatula]
Length = 514
Score = 181 bits (458), Expect(2) = 9e-66
Identities = 89/143 (62%), Positives = 111/143 (77%), Gaps = 4/143 (2%)
Frame = +1
Query: 181 GHQAEVLSIDCLRKERVLSVGRDRTLRFGKVPEGAQLVFRAPAASLECCAFISSDEFISG 360
GHQ+EVLSIDCLRKERVLS GRDR+++ KV E ++LVFRAPA+SLECC F++++EF+SG
Sbjct: 292 GHQSEVLSIDCLRKERVLSAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVNNEEFLSG 351
Query: 361 SDDGSIELWNTIRKKPAFIVKNAHPAVAPNVMED----EGLPNGDHQDNGSTKTNSYCSS 528
SDDGSIELW +RKKP I++NAH + + D E LPNG+ ++ N +CSS
Sbjct: 352 SDDGSIELWGAVRKKPIHILRNAHALLTDSKKSDQNDSERLPNGNLENGHHHPENHHCSS 411
Query: 529 ALSWVSAVTVCRSSDLAASGAGN 597
SWVSAVTVCR+SDLAASGAGN
Sbjct: 412 VHSWVSAVTVCRNSDLAASGAGN 434
Score = 95.5 bits (236), Expect(2) = 9e-66
Identities = 39/61 (63%), Positives = 52/61 (85%)
Frame = +2
Query: 2 RHVHIWDSRTRQHIRALRGHKGPVSCLTFRQGTSELFSGSFDGTIKSWNAEDRSYVDDLQ 181
RH+HIWD+RTR+H++A GH+GPVS L FR+G++ELFSGSFD T+K WN EDR+Y++ L
Sbjct: 232 RHIHIWDTRTREHLQAFPGHRGPVSSLAFREGSTELFSGSFDRTVKIWNVEDRTYMNTLF 291
Query: 182 G 184
G
Sbjct: 292 G 292