BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008203
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
ref|XP_002519842.1| pentatricopeptide repeat-containing protein,...   129   2e-28
ref|XP_002863397.1| pentatricopeptide repeat-containing protein ...   114   1e-23
ref|NP_199470.1| pentatricopeptide repeat-containing protein [Ar...   110   2e-22

>ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Cucumis sativus]
           gi|449521148|ref|XP_004167592.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic-like [Cucumis sativus]
          Length = 710

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/147 (51%), Positives = 95/147 (64%), Gaps = 3/147 (2%)
 Frame = -3

Query: 432 KTQPIFFSSSTSLKRPTKRFLILCNSKTPSEAPSLQQEQP---PNQSLADQLKPLTLTLL 262
           K  PIFF+S    K  TKR  +LC+S      PS    Q     N SL++QLK L+ T L
Sbjct: 14  KPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTL 73

Query: 261 SDTQXXXXXXXXXXXSTWVNPSKPRRSVLSLQRHQRDSYSQNPQLTDLKLFSKKLNECDP 82
           S+             STWVNP+KP+RSVLSLQR +R SYS NP++ DLK F+ KLN CD 
Sbjct: 74  SNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACDS 133

Query: 81  NSESEFLAALQEIPHPPTRENALLILN 1
           + ++ F+AAL+EIPHPPT+ENALLILN
Sbjct: 134 SDDASFIAALEEIPHPPTKENALLILN 160


>ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
           chloroplastic [Vitis vinifera]
          Length = 723

 Score =  134 bits (338), Expect = 6e-30
 Identities = 76/157 (48%), Positives = 99/157 (63%), Gaps = 10/157 (6%)
 Frame = -3

Query: 441 HNSKTQPIFFSSSTSLKRPTKRFLILCNSKT-------PSEAPSL---QQEQPPNQSLAD 292
           H +K  P  FS ST     T  F I CNS +       P   P+    +Q    N SL++
Sbjct: 21  HTTK-YPNLFSKSTKFSSNT--FTIRCNSSSRSPPKPKPKPKPTSSDSEQTNHQNPSLSE 77

Query: 291 QLKPLTLTLLSDTQXXXXXXXXXXXSTWVNPSKPRRSVLSLQRHQRDSYSQNPQLTDLKL 112
           QLKPL+ T+L+              STW+NP+KP+ SVLSLQRH+R +YS NPQ+ DLKL
Sbjct: 78  QLKPLSKTILTRDHSGQTHLVSKPKSTWINPTKPKPSVLSLQRHKRHNYSYNPQIRDLKL 137

Query: 111 FSKKLNECDPNSESEFLAALQEIPHPPTRENALLILN 1
           F+KK+NE + + ESEFLA L++IPHPPTR+NALL+LN
Sbjct: 138 FAKKINESESSDESEFLAVLEQIPHPPTRDNALLLLN 174


>ref|XP_002519842.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540888|gb|EEF42446.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 677

 Score =  129 bits (325), Expect = 2e-28
 Identities = 76/159 (47%), Positives = 104/159 (65%), Gaps = 9/159 (5%)
 Frame = -3

Query: 450 LERHNSKTQPIFFSSSTSL-----KRPTKRFL-ILCNSKTPSEAPSLQQEQPPNQSLADQ 289
           +  H+ K +PI F+SS+ +       P +R L I CNS+  S+  S +   P N SL+DQ
Sbjct: 16  ITHHSDKKKPILFTSSSPITITHNNNPYRRRLTISCNSRKTSKHLS-ESPNPKNPSLSDQ 74

Query: 288 LKPLTLTLLSDTQXXXXXXXXXXXS---TWVNPSKPRRSVLSLQRHQRDSYSQNPQLTDL 118
           LKPL+ T LS T                TWVNP+KP+RSVLSLQR +R  YS NP++ +L
Sbjct: 75  LKPLSSTTLSTTTTTTTTKHSLLSKPNSTWVNPTKPKRSVLSLQRQKRSPYSLNPKVKEL 134

Query: 117 KLFSKKLNECDPNSESEFLAALQEIPHPPTRENALLILN 1
           +LF++KLN+CD ++ES FL+ L++IP+P TRENALLILN
Sbjct: 135 RLFAQKLNDCD-STESSFLSLLEQIPYPLTRENALLILN 172


>ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309232|gb|EFH39656.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 711

 Score =  114 bits (284), Expect = 1e-23
 Identities = 63/152 (41%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
 Frame = -3

Query: 447 ERHNSKTQPIFFSSSTSLKRPTKRFLILCNSKTPSEAPSLQQEQP---PNQSLADQLKPL 277
           +  ++K   +F   S   +  T++  I C+S    + P   +E+P      SL++QLKPL
Sbjct: 16  QNSDTKKHSLFLKPSLLRQSRTRKLNISCSSL---KQPKTLEEEPITTKTPSLSEQLKPL 72

Query: 276 TLTLLSDTQXXXXXXXXXXXSTWVNPSKPRRSVLSLQRHQRDSYSQNPQLTDLKLFSKKL 97
           + T L   Q             WVNP++P+RSVLSLQR +R +YS NPQ+ DL+ F++KL
Sbjct: 73  SATTLRQEQTQILSKPKS---VWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFAQKL 129

Query: 96  NECDPNSESEFLAALQEIPHPPTRENALLILN 1
           N  +   +SEFL+ L EIPHPP R+NALL+LN
Sbjct: 130 NSSNFTEKSEFLSLLDEIPHPPDRDNALLVLN 161


>ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g46580, chloroplastic; Flags: Precursor
           gi|8885599|dbj|BAA97529.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008017|gb|AED95400.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 711

 Score =  110 bits (274), Expect = 2e-22
 Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
 Frame = -3

Query: 447 ERHNSKTQPIFFSSSTSLKRPTKRFLILCNSKTPSEAPSLQQEQP---PNQSLADQLKPL 277
           +  ++K   +F   S   +  +++  I C+S    + P   +E+P      SL++QLKPL
Sbjct: 16  QNSDTKKHSLFLKPSLFRQSRSRKLNISCSSL---KQPKTLEEEPITTKTPSLSEQLKPL 72

Query: 276 TLTLLSDTQXXXXXXXXXXXSTWVNPSKPRRSVLSLQRHQRDSYSQNPQLTDLKLFSKKL 97
           + T L   Q             WVNP++P+RSVLSLQR +R +YS NPQ+ DL+ F+ KL
Sbjct: 73  SATTLRQEQTQILSKPKS---VWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKL 129

Query: 96  NECDPNSESEFLAALQEIPHPPTRENALLILN 1
           N      +SEFL+ L EIPHPP R+NALL+LN
Sbjct: 130 NSSIFTEKSEFLSLLDEIPHPPNRDNALLVLN 161