BLASTX nr result

ID: Aconitum21_contig00008060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008060
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31778.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   115   4e-24
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]   115   4e-24
ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicag...   115   5e-24
ref|NP_188872.2| DEAD-box ATP-dependent RNA helicase 53 [Arabido...   113   2e-23

>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  115 bits (289), Expect = 4e-24
 Identities = 55/59 (93%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 QGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRNPLALVLAPTRELAKQVEKEF 2
           QGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHGRGRNPLALVLAPTRELA+QVEKEF
Sbjct: 151 QGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEF 209



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
 Frame = -3

Query: 483 VGVRGFHV------STPLEFRSSLVSQAQFAVDDFSDDEKIGAGKKEEGLEISKLGIDKE 322
           +G  GF V      S PL+FR+S+VS+A++AV DFSD+EK   G  +EGLEISKLGI +E
Sbjct: 67  LGFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKG-GDEGLEISKLGIAQE 125

Query: 321 IV 316
           IV
Sbjct: 126 IV 127


>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
           vinifera]
          Length = 666

 Score =  115 bits (289), Expect = 4e-24
 Identities = 55/59 (93%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 QGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRNPLALVLAPTRELAKQVEKEF 2
           QGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHGRGRNPLALVLAPTRELA+QVEKEF
Sbjct: 151 QGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEF 209



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
 Frame = -3

Query: 483 VGVRGFHV------STPLEFRSSLVSQAQFAVDDFSDDEKIGAGKKEEGLEISKLGIDKE 322
           +G  GF V      S PL+FR+S+VS+A++AV DFSD+EK   G  +EGLEISKLGI +E
Sbjct: 67  LGFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKG-GDEGLEISKLGIAQE 125

Query: 321 IV 316
           IV
Sbjct: 126 IV 127


>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score =  115 bits (289), Expect = 4e-24
 Identities = 55/59 (93%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 QGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRNPLALVLAPTRELAKQVEKEF 2
           QGRDMIGRARTGTGKTLAFGIPIMDK+I++NAKHGRGRNPLALVLAPTRELA+QVEKEF
Sbjct: 151 QGRDMIGRARTGTGKTLAFGIPIMDKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEF 209



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
 Frame = -3

Query: 483 VGVRGFHV------STPLEFRSSLVSQAQFAVDDFSDDEKIGAGKKEEGLEISKLGIDKE 322
           +G  GF V      S PL+FR+S+VS+A++AV DFSD+EK   G  +EGLEISKLGI +E
Sbjct: 67  LGFSGFRVRNFRSQSGPLDFRASVVSRAEYAVADFSDEEKSSKG-GDEGLEISKLGIAQE 125

Query: 321 IV 316
           IV
Sbjct: 126 IV 127


>ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355518636|gb|AET00260.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 802

 Score =  115 bits (288), Expect = 5e-24
 Identities = 56/59 (94%), Positives = 59/59 (100%)
 Frame = -2

Query: 178 QGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRNPLALVLAPTRELAKQVEKEF 2
           QGRDMIGRARTGTGKTLAFGIPIMDKII+FNAKHGRG++PLALVLAPTRELAKQVEKEF
Sbjct: 116 QGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGKDPLALVLAPTRELAKQVEKEF 174


>ref|NP_188872.2| DEAD-box ATP-dependent RNA helicase 53 [Arabidopsis thaliana]
           gi|75335516|sp|Q9LUW5.1|RH53_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 53
           gi|9293867|dbj|BAB01770.1| DEAD-Box RNA helicase-like
           protein [Arabidopsis thaliana]
           gi|17064852|gb|AAL32580.1| DEAD-Box RNA helicase-like
           protein [Arabidopsis thaliana]
           gi|20259816|gb|AAM13255.1| DEAD-Box RNA helicase-like
           protein [Arabidopsis thaliana]
           gi|332643101|gb|AEE76622.1| DEAD-box ATP-dependent RNA
           helicase 53 [Arabidopsis thaliana]
          Length = 616

 Score =  113 bits (283), Expect = 2e-23
 Identities = 54/59 (91%), Positives = 58/59 (98%)
 Frame = -2

Query: 178 QGRDMIGRARTGTGKTLAFGIPIMDKIIKFNAKHGRGRNPLALVLAPTRELAKQVEKEF 2
           +GRDMIGRARTGTGKTLAFGIPI+DKIIK+NAKHGRGRNPL LVLAPTRELA+QVEKEF
Sbjct: 140 EGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEF 198


Top