BLASTX nr result

ID: Aconitum21_contig00008025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008025
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308925.1| chromatin remodeling complex subunit [Populu...   340   3e-91
ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi...   332   4e-89
ref|XP_002323271.1| chromatin remodeling complex subunit [Populu...   332   4e-89
emb|CBI29799.3| unnamed protein product [Vitis vinifera]              330   3e-88
ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase...   324   1e-86

>ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854901|gb|EEE92448.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1483

 Score =  340 bits (871), Expect = 3e-91
 Identities = 186/259 (71%), Positives = 205/259 (79%), Gaps = 3/259 (1%)
 Frame = +3

Query: 3    YLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 182
            YLRLDGSSTIMDRRDMVRDFQ R+DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD
Sbjct: 1204 YLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 1263

Query: 183  LQAMDRAHRLGQTKEVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPED 362
            LQAMDRAHRLGQTK+VTVYRLICKETVEEKILQRASQK+TVQQLVMTGGHVQ DLLAPED
Sbjct: 1264 LQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKHTVQQLVMTGGHVQDDLLAPED 1323

Query: 363  VVSLLLDDAQLERKLRQVPLQVKDRQKKKLGSKGIRIDAEGDASLEDLTET---GLPSST 533
            VVSLLLDDAQLE+KLR++PLQ KDRQKKK  +K IR+DAEGDA+LEDLTET   G  +  
Sbjct: 1324 VVSLLLDDAQLEQKLREIPLQAKDRQKKK-PTKAIRVDAEGDATLEDLTETVTQGTGNEP 1382

Query: 534  LEAVPEEGINNKKRKSNSARQQSSQKVSGNTDSLNGSSKSNSMDYGLEDPYRNTXXXXXX 713
             E   +   NNKKRK+ S +Q + +  +   + LN    S SMDY L+DP+ N       
Sbjct: 1383 SEDTEKLKPNNKKRKAASDKQITPKPRNSQKNELN----STSMDYELDDPFLNDEPQSQR 1438

Query: 714  XXXXXXXXXSVNENLEPAF 770
                     SVNE LEPAF
Sbjct: 1439 PKRLKRPKKSVNEKLEPAF 1457


>ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera]
          Length = 1563

 Score =  332 bits (852), Expect = 4e-89
 Identities = 186/269 (69%), Positives = 206/269 (76%), Gaps = 13/269 (4%)
 Frame = +3

Query: 3    YLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 182
            YLRLDGSSTIMDRRDMVRDFQ RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD
Sbjct: 1256 YLRLDGSSTIMDRRDMVRDFQLRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 1315

Query: 183  LQAMDRAHRLGQTKEVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPED 362
            LQAMDRAHRLGQTK+VTVYRLICKETVEEKILQRASQK+TVQQLVMTGGHVQGDLLAPED
Sbjct: 1316 LQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLVMTGGHVQGDLLAPED 1375

Query: 363  VVSLLLDDAQLERKLRQVPLQV----KDRQKKKLGSKGIRIDAEGDASLEDLTETGLPSS 530
            VVSLLLDDAQLE+KLR +PLQV    KD+QKKK G+KGI +DAEGDA+LED       + 
Sbjct: 1376 VVSLLLDDAQLEQKLRDLPLQVRFKSKDKQKKKRGTKGILLDAEGDATLEDFPNISQGNG 1435

Query: 531  TLEAVPEE--GINNKKRKSNSARQ-----QSSQKVSGNTDSLNGSSKSNS--MDYGLEDP 683
               +   E    ++KKRK+ + +Q     ++SQK   N DS  G +  NS  MDY L+D 
Sbjct: 1436 QEPSPDAERPKSSSKKRKAATDKQTPPKPRNSQKAMKNVDSYTGMTDPNSMAMDYELDDS 1495

Query: 684  YRNTXXXXXXXXXXXXXXXSVNENLEPAF 770
             +N                SVNENLEPAF
Sbjct: 1496 LQNDDMQLQKHKRPKRPTKSVNENLEPAF 1524


>ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222867901|gb|EEF05032.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1540

 Score =  332 bits (852), Expect = 4e-89
 Identities = 179/257 (69%), Positives = 200/257 (77%), Gaps = 1/257 (0%)
 Frame = +3

Query: 3    YLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 182
            YLRLDGSSTIMDRRDMVRDFQ R+DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD
Sbjct: 1260 YLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 1319

Query: 183  LQAMDRAHRLGQTKEVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPED 362
            LQAMDRAHRLGQTK+VTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQ DLLAPED
Sbjct: 1320 LQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQDDLLAPED 1379

Query: 363  VVSLLLDDAQLERKLRQVPLQVKDRQKKKLGSKGIRIDAEGDASLEDLTETGLPSSTLEA 542
            VVSLLLDDAQLE+KLR++PLQ +DRQKKK  +K IR+DAEGDA+ EDLTET +   T   
Sbjct: 1380 VVSLLLDDAQLEQKLREIPLQARDRQKKK-PTKAIRVDAEGDATFEDLTET-VAQGTGNE 1437

Query: 543  VPEEGINNKKRKSNSARQQSSQKVSGN-TDSLNGSSKSNSMDYGLEDPYRNTXXXXXXXX 719
              E+    K   SN  +  S ++++    +S      S+ MDY L+DP+ N+        
Sbjct: 1438 QSEDAEKLKSPNSNKRKAASDKQITSKPRNSQKNEPNSSPMDYELDDPFPNSEPQSQRPK 1497

Query: 720  XXXXXXXSVNENLEPAF 770
                   SVNE LEPAF
Sbjct: 1498 RLKRPKKSVNEKLEPAF 1514


>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
          Length = 1557

 Score =  330 bits (845), Expect = 3e-88
 Identities = 184/265 (69%), Positives = 204/265 (76%), Gaps = 9/265 (3%)
 Frame = +3

Query: 3    YLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 182
            YLRLDGSSTIMDRRDMVRDFQ RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD
Sbjct: 1256 YLRLDGSSTIMDRRDMVRDFQLRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 1315

Query: 183  LQAMDRAHRLGQTKEVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPED 362
            LQAMDRAHRLGQTK+VTVYRLICKETVEEKILQRASQK+TVQQLVMTGGHVQGDLLAPED
Sbjct: 1316 LQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLVMTGGHVQGDLLAPED 1375

Query: 363  VVSLLLDDAQLERKLRQVPLQVKDRQKKKLGSKGIRIDAEGDASLEDLTETGLPSSTLEA 542
            VVSLLLDDAQLE+KLR +PLQ  D+QKKK G+KGI +DAEGDA+LED       +    +
Sbjct: 1376 VVSLLLDDAQLEQKLRDLPLQ--DKQKKKRGTKGILLDAEGDATLEDFPNISQGNGQEPS 1433

Query: 543  VPEE--GINNKKRKSNSARQ-----QSSQKVSGNTDSLNGSSKSNS--MDYGLEDPYRNT 695
               E    ++KKRK+ + +Q     ++SQK   N DS  G +  NS  MDY L+D  +N 
Sbjct: 1434 PDAERPKSSSKKRKAATDKQTPPKPRNSQKAMKNVDSYTGMTDPNSMAMDYELDDSLQND 1493

Query: 696  XXXXXXXXXXXXXXXSVNENLEPAF 770
                           SVNENLEPAF
Sbjct: 1494 DMQLQKHKRPKRPTKSVNENLEPAF 1518


>ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase INO80-like [Cucumis
            sativus]
          Length = 711

 Score =  324 bits (830), Expect = 1e-86
 Identities = 177/257 (68%), Positives = 200/257 (77%), Gaps = 3/257 (1%)
 Frame = +3

Query: 3    YLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 182
            YLRLDGSSTIMDRRDMVRDFQHR+DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD
Sbjct: 449  YLRLDGSSTIMDRRDMVRDFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 508

Query: 183  LQAMDRAHRLGQTKEVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPED 362
            LQAMDRAHRLGQTK+VTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGD+LAPED
Sbjct: 509  LQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPED 568

Query: 363  VVSLLLDDAQLERKLRQVPLQVKDRQKKKLGSKGIRIDAEGDASLEDLTETGLPSSTLEA 542
            VVSLLLDDAQLE+KLR++P+  KDRQKKK  +KGIR+DAEGDASLEDLT      +  + 
Sbjct: 569  VVSLLLDDAQLEQKLREIPIVAKDRQKKK-QAKGIRVDAEGDASLEDLTNPESRVTEYDP 627

Query: 543  VPE---EGINNKKRKSNSARQQSSQKVSGNTDSLNGSSKSNSMDYGLEDPYRNTXXXXXX 713
             P+      N+KKRK    +Q SS+  + +   +N    S  +D+ L++  +N       
Sbjct: 628  SPDPEKTKANSKKRKGGPEKQNSSK--ARSLQRIN--EMSPVVDFDLDESRQNLEPQTQK 683

Query: 714  XXXXXXXXXSVNENLEP 764
                     SVNENL P
Sbjct: 684  PKRPKRPTKSVNENLVP 700


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