BLASTX nr result

ID: Aconitum21_contig00008022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00008022
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34953.3| unnamed protein product [Vitis vinifera]              263   2e-68
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...   263   2e-68
ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   239   4e-61
ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cuc...   236   4e-60
ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp....   235   7e-60

>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  263 bits (672), Expect = 2e-68
 Identities = 146/226 (64%), Positives = 171/226 (75%), Gaps = 1/226 (0%)
 Frame = -1

Query: 676 NELKGKSVVSENIEVSGNSSNSDGDATRRFDQETLDAMLAASLAEEEYGSVTGNASTSVR 497
           N  KGK V+S   E +G  S  +   +  ++QE LD MLAASLA EE G+  G+A  S  
Sbjct: 133 NNDKGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLAAEEDGNFVGDAGISNE 192

Query: 496 DDILSEEDDEGDEEMVLPVMDGKVDPTILAALPPSMQLDLLVQMRERLMAENRQKYQKVK 317
           +D    +DD+ DEEM+LP+M+GKVDP +LAALPPSMQLDLLVQMRE+LMAENRQKYQKVK
Sbjct: 193 ED----DDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQMREKLMAENRQKYQKVK 248

Query: 316 KAPAQFSELQIQAYLKTVAFRREINEVQKSAIGTGVGGVQTSRIASEANREYIFSSSFTG 137
           KAPA+FSELQIQAYLKTVAFRREI+EVQKSA G GVGGVQTSRIASEANREYIFSSSFTG
Sbjct: 249 KAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRIASEANREYIFSSSFTG 308

Query: 136 DKEELTSAGTEKN-DAELRTRRTGPVRLDSVNHVPSVALSSPEIQS 2
           DKE LT+ G EKN D + +     P   DS N+V S + S+   +S
Sbjct: 309 DKEALTNGGVEKNGDKQYQIPTECPP--DSPNNVASTSKSNTAAES 352


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score =  263 bits (672), Expect = 2e-68
 Identities = 146/226 (64%), Positives = 171/226 (75%), Gaps = 1/226 (0%)
 Frame = -1

Query: 676 NELKGKSVVSENIEVSGNSSNSDGDATRRFDQETLDAMLAASLAEEEYGSVTGNASTSVR 497
           N  KGK V+S   E +G  S  +   +  ++QE LD MLAASLA EE G+  G+A  S  
Sbjct: 133 NNDKGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLAAEEDGNFVGDAGISNE 192

Query: 496 DDILSEEDDEGDEEMVLPVMDGKVDPTILAALPPSMQLDLLVQMRERLMAENRQKYQKVK 317
           +D    +DD+ DEEM+LP+M+GKVDP +LAALPPSMQLDLLVQMRE+LMAENRQKYQKVK
Sbjct: 193 ED----DDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQMREKLMAENRQKYQKVK 248

Query: 316 KAPAQFSELQIQAYLKTVAFRREINEVQKSAIGTGVGGVQTSRIASEANREYIFSSSFTG 137
           KAPA+FSELQIQAYLKTVAFRREI+EVQKSA G GVGGVQTSRIASEANREYIFSSSFTG
Sbjct: 249 KAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRIASEANREYIFSSSFTG 308

Query: 136 DKEELTSAGTEKN-DAELRTRRTGPVRLDSVNHVPSVALSSPEIQS 2
           DKE LT+ G EKN D + +     P   DS N+V S + S+   +S
Sbjct: 309 DKEALTNGGVEKNGDKQYQIPTECPP--DSPNNVASTSKSNTAAES 352


>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like
           [Glycine max]
          Length = 1707

 Score =  239 bits (610), Expect = 4e-61
 Identities = 128/192 (66%), Positives = 150/192 (78%), Gaps = 2/192 (1%)
 Frame = -1

Query: 667 KGKSVVSENIEVSGNSSNSDGDATRRFDQETLDAMLAASLAEEEYGSVTGNASTSVRDDI 488
           KGK ++    ++ G SS  D   +R  +Q ++D MLAAS+A EE   +  N STSV    
Sbjct: 284 KGKGILLIEADMVGCSSRHDNVTSRSDNQHSIDEMLAASIAMEENEELVNNTSTSVGASA 343

Query: 487 LSEE--DDEGDEEMVLPVMDGKVDPTILAALPPSMQLDLLVQMRERLMAENRQKYQKVKK 314
           + EE  D + DEEM+LP M GK+DP +LA+LPPSMQLDLLVQMRERL+AENRQKYQKVKK
Sbjct: 344 IEEEEVDYDEDEEMILPAMHGKIDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKK 403

Query: 313 APAQFSELQIQAYLKTVAFRREINEVQKSAIGTGVGGVQTSRIASEANREYIFSSSFTGD 134
            PA+FSELQIQAYLKTVAFRR+I+EVQK+A   GVGGVQTSRIASEANREYIFSSSFTGD
Sbjct: 404 DPAKFSELQIQAYLKTVAFRRDIDEVQKAAAVGGVGGVQTSRIASEANREYIFSSSFTGD 463

Query: 133 KEELTSAGTEKN 98
           K+ELTS   EKN
Sbjct: 464 KQELTSTSLEKN 475



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
 Frame = -1

Query: 673 ELKGKSVVSENIEVSGNSSNSDGDATRRFDQETLDAMLAASLAEEEYGSVTGNASTSVRD 494
           EL   SV     +  GNSS +    T  ++QE L  MLAAS+A E+ G        S+  
Sbjct: 160 ELDEMSVAKYAAKEDGNSSQATILTT--YNQEELHEMLAASIAAEKNGIHARKGMPSIVI 217

Query: 493 DILSEEDDEGDEEMVLPVMDGKVDPTILAALPPSMQLDLLVQMR----ERLMAE-NRQKY 329
           + L EE D  DE+++LP ++ +VD  +LAALP SMQLD+L Q++    E L+ E + Q  
Sbjct: 218 NPLEEERD-ADEQIILPSVNAEVDMAVLAALPQSMQLDILAQLKGKKTEGLVKEVDNQNQ 276

Query: 328 QKVKKAPAQFSELQIQAYLKTVAFRREINEVQKSAIGTGVGGVQTSRIASEANREYIFSS 149
             V         L I+A +   + R + N   +S     +  +  + IA E N E + ++
Sbjct: 277 HDVNYRGKGKGILLIEADMVGCSSRHD-NVTSRSDNQHSIDEMLAASIAMEENEELVNNT 335

Query: 148 S 146
           S
Sbjct: 336 S 336


>ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
           gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair
           protein UVH3-like [Cucumis sativus]
          Length = 1541

 Score =  236 bits (601), Expect = 4e-60
 Identities = 125/190 (65%), Positives = 149/190 (78%)
 Frame = -1

Query: 667 KGKSVVSENIEVSGNSSNSDGDATRRFDQETLDAMLAASLAEEEYGSVTGNASTSVRDDI 488
           KGK ++S+   V G+ S     A+R   Q+ LD MLAAS+A EE  S+   ASTS   ++
Sbjct: 203 KGKELLSDETHVVGSDSERMDLASRSAHQQNLDEMLAASIAAEEARSLNEKASTSAVTNL 262

Query: 487 LSEEDDEGDEEMVLPVMDGKVDPTILAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAP 308
             E+ D+ DEE +LP M G VDP++LAALPPS+QLDLLVQMRERLMAENRQKYQ+VKK P
Sbjct: 263 DGEDTDDEDEEFILPEMHGVVDPSVLAALPPSVQLDLLVQMRERLMAENRQKYQRVKKDP 322

Query: 307 AQFSELQIQAYLKTVAFRREINEVQKSAIGTGVGGVQTSRIASEANREYIFSSSFTGDKE 128
           A+FSELQIQAYLKTVAFRR+I++VQK+A G GVGGVQTSRIASEANRE+IFSSSFTGDK+
Sbjct: 323 AKFSELQIQAYLKTVAFRRDIDQVQKAAAGRGVGGVQTSRIASEANREFIFSSSFTGDKQ 382

Query: 127 ELTSAGTEKN 98
            L S   EKN
Sbjct: 383 ALASGRAEKN 392


>ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321256|gb|EFH51677.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1463

 Score =  235 bits (599), Expect = 7e-60
 Identities = 132/203 (65%), Positives = 154/203 (75%), Gaps = 8/203 (3%)
 Frame = -1

Query: 679 KNELKGKSVVSENIEVSGNSSNS---DGDATRRFDQETLDAMLAASLAEEEYGSVTGNAS 509
           K++ KGK V+ +  ++     ++   D     +  QE LD MLAASLA EE G+ T  AS
Sbjct: 184 KDDPKGKGVLLDGDDLDNKMKSNLEQDSSVQGKDYQEKLDEMLAASLAAEEEGNFTSKAS 243

Query: 508 TSVRDDILSEEDDEG-----DEEMVLPVMDGKVDPTILAALPPSMQLDLLVQMRERLMAE 344
           TS    I SEE+DE      DEE++LPVMDG +DP +LA+LPPSMQLDLLVQMRE+LMAE
Sbjct: 244 TSAAA-IPSEEEDEDEDSDEDEEILLPVMDGNIDPAVLASLPPSMQLDLLVQMREKLMAE 302

Query: 343 NRQKYQKVKKAPAQFSELQIQAYLKTVAFRREINEVQKSAIGTGVGGVQTSRIASEANRE 164
           NRQKYQKVKKAP +FSELQI+AYLKTVAFRREINEVQ+SA G  VGGVQTSRIASEANRE
Sbjct: 303 NRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSRIASEANRE 362

Query: 163 YIFSSSFTGDKEELTSAGTEKND 95
           +IFSSSF GDKEEL SA   +ND
Sbjct: 363 FIFSSSFAGDKEELASAREGRND 385


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