BLASTX nr result

ID: Aconitum21_contig00007365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00007365
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding prote...    68   2e-09
emb|CBI34243.3| unnamed protein product [Vitis vinifera]               66   7e-09
emb|CBI26110.3| unnamed protein product [Vitis vinifera]               61   3e-07
ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding prote...    61   3e-07

>ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
          Length = 532

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
 Frame = +1

Query: 34  TANRSQDTVSGHVEARLGSMGGFNSSQSKLTHQHPPRPGSGGVSKYFTQ---TSNAAPVR 204
           T+ RS D+  G +E +L    GF+SSQS     HPP     G+S Y +    ++ AAPV 
Sbjct: 386 TSRRSVDSRLGPIEFQLQRPHGFDSSQSNPRPYHPP-----GLSSYRSSRPPSTVAAPVM 440

Query: 205 TKTVGSASSVNPRPE--CSKPWVXXXXXXXXXXXXXXXXXXXMYTGRMPSPNFMAQAVQI 378
           T+T    SSV  RP+   ++                      M  GR P P  MA AVQI
Sbjct: 441 TRTGDPVSSVGLRPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGRGP-PRAMAPAVQI 499

Query: 379 RSVVPVCSAPPMKVPESTVEEG 444
           R+VVPVCSAPP +   S+ +EG
Sbjct: 500 RTVVPVCSAPPARKIPSSSQEG 521


>emb|CBI34243.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
 Frame = +1

Query: 34  TANRSQDTVSGHVEARLGSMGGFNSSQSKLTHQHPPRPGSGGVSKYFTQ---TSNAAPVR 204
           T+ RS D+  G +E +L    GF+SSQS     HPP     G+S Y +    ++ AAPV 
Sbjct: 397 TSRRSVDSRLGPIEFQLQRPHGFDSSQSNPRPYHPP-----GLSSYRSSRPPSTVAAPVM 451

Query: 205 TKTVGSASSVNPRPE--CSKPWVXXXXXXXXXXXXXXXXXXXMYTGRMPSPNFMAQAVQI 378
           T+T    SSV  RP+   ++                      M  GR P P  MA AVQI
Sbjct: 452 TRTGDPVSSVGLRPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGRGP-PRAMAPAVQI 510

Query: 379 RSVVPVCSAPP-MKVPESTVEE 441
           R+VVPVCSAPP  K+P  + +E
Sbjct: 511 RTVVPVCSAPPARKIPRPSSKE 532


>emb|CBI26110.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 48/142 (33%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1   KFKWSSPDPIETANRSQDTVSGHVEARLGSMGGFNSSQSKLTHQHPPRPGSGGVSKYFTQ 180
           +  W+SP   +T  RS    S      L +    +  QS +  Q+ P     G S+ +T+
Sbjct: 404 RLAWTSPRFADT--RSSAGASDEANLWLQNQQFLDYLQSNIRSQNAPMATYPGSSRVYTR 461

Query: 181 TSNAAPVRTKTVGSASSVNPRPECSKPWVXXXXXXXXXXXXXXXXXXX---MYTGRMPSP 351
            S AAPV  ++  ++S   PRP  S  +V                       YTG  P  
Sbjct: 462 PS-AAPVTIRSSDASSIRKPRPMSSSLFVSAPPPTRYAAPTWSTRPTLEGAKYTGVRPCS 520

Query: 352 NFMAQAVQIRSVVPVCSAPPMK 417
            FMA AV IRSVVPVCSAPP K
Sbjct: 521 RFMAPAVNIRSVVPVCSAPPAK 542


>ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
           vinifera]
          Length = 563

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 48/142 (33%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1   KFKWSSPDPIETANRSQDTVSGHVEARLGSMGGFNSSQSKLTHQHPPRPGSGGVSKYFTQ 180
           +  W+SP   +T  RS    S      L +    +  QS +  Q+ P     G S+ +T+
Sbjct: 404 RLAWTSPRFADT--RSSAGASDEANLWLQNQQFLDYLQSNIRSQNAPMATYPGSSRVYTR 461

Query: 181 TSNAAPVRTKTVGSASSVNPRPECSKPWVXXXXXXXXXXXXXXXXXXX---MYTGRMPSP 351
            S AAPV  ++  ++S   PRP  S  +V                       YTG  P  
Sbjct: 462 PS-AAPVTIRSSDASSIRKPRPMSSSLFVSAPPPTRYAAPTWSTRPTLEGAKYTGVRPCS 520

Query: 352 NFMAQAVQIRSVVPVCSAPPMK 417
            FMA AV IRSVVPVCSAPP K
Sbjct: 521 RFMAPAVNIRSVVPVCSAPPAK 542


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