BLASTX nr result

ID: Aconitum21_contig00007220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00007220
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycin...   154   2e-35
ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycin...   150   3e-34
ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotei...   149   5e-34
ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|2...   145   7e-33
ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medica...   142   6e-32

>ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
           gi|255647802|gb|ACU24361.1| unknown [Glycine max]
          Length = 232

 Score =  154 bits (388), Expect = 2e-35
 Identities = 79/133 (59%), Positives = 95/133 (71%)
 Frame = +1

Query: 292 LRIQYAKTKSDCFAKAAGTFVPRXXXXXXXXXXXXXXXXXXXXXXXXXXNGSSTQTNGAP 471
           +RIQYAKTKSDC AK  GT+VPR                          NG+ + +NG P
Sbjct: 82  MRIQYAKTKSDCIAKEEGTYVPREKKKKQEEKAERKRRAEEAQQSGVA-NGTHSASNGGP 140

Query: 472 SASHRQGKPGAQEATAPNSILFIQNLPHDTTGMMLEILFQQYPGFKEVRMIEAKPGIAFI 651
           +AS RQG PGAQE  APN+ILFI+NLPH+TTG MLE+LF+QYPGFKEVR+IEAKPGIAF+
Sbjct: 141 TASFRQG-PGAQETAAPNNILFIENLPHETTGRMLEMLFEQYPGFKEVRLIEAKPGIAFV 199

Query: 652 EYEDELHSSMAMQ 690
           ++EDE+ SSMAMQ
Sbjct: 200 DFEDEVQSSMAMQ 212


>ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycine max]
           gi|255627621|gb|ACU14155.1| unknown [Glycine max]
          Length = 232

 Score =  150 bits (378), Expect = 3e-34
 Identities = 78/133 (58%), Positives = 94/133 (70%)
 Frame = +1

Query: 292 LRIQYAKTKSDCFAKAAGTFVPRXXXXXXXXXXXXXXXXXXXXXXXXXXNGSSTQTNGAP 471
           +RI YAKTKSDC AK  G+FVPR                          NG+ + +NG P
Sbjct: 82  MRIHYAKTKSDCIAKEEGSFVPREKKKKQEEKAERKRRVEEAQQSGVA-NGTHSASNGGP 140

Query: 472 SASHRQGKPGAQEATAPNSILFIQNLPHDTTGMMLEILFQQYPGFKEVRMIEAKPGIAFI 651
           +AS RQG PGAQEA APN+ILFI+NLPH+TTG MLE+LF+QYPGFKEV +IEAKPGIAF+
Sbjct: 141 TASFRQG-PGAQEAAAPNNILFIENLPHETTGRMLEMLFEQYPGFKEVCLIEAKPGIAFV 199

Query: 652 EYEDELHSSMAMQ 690
           ++EDE+ SSMAMQ
Sbjct: 200 DFEDEVQSSMAMQ 212


>ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
           gi|297745807|emb|CBI15863.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  149 bits (376), Expect = 5e-34
 Identities = 77/134 (57%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
 Frame = +1

Query: 292 LRIQYAKTKSDCFAKAAGTFVPRXXXXXXXXXXXXXXXXXXXXXXXXXXNGSSTQTNGAP 471
           +R+QYAKTKSDC AKA GTFVPR                          NG + +TNG P
Sbjct: 82  MRVQYAKTKSDCVAKADGTFVPREKKKKQEEKAEKKRRAEEAQQSGNA-NGRNAETNGGP 140

Query: 472 SASHRQGKPGAQEA-TAPNSILFIQNLPHDTTGMMLEILFQQYPGFKEVRMIEAKPGIAF 648
           +   RQG  GA+E   APN+ILFIQNLPH TT MML++LFQQYPGF+EVRMIEAKPGIAF
Sbjct: 141 TPPFRQGNQGAREPEAAPNNILFIQNLPHQTTSMMLQVLFQQYPGFREVRMIEAKPGIAF 200

Query: 649 IEYEDELHSSMAMQ 690
           +E+ED++ SSMAM+
Sbjct: 201 VEFEDDVQSSMAME 214


>ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|222862970|gb|EEF00477.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  145 bits (366), Expect = 7e-33
 Identities = 73/133 (54%), Positives = 88/133 (66%)
 Frame = +1

Query: 292 LRIQYAKTKSDCFAKAAGTFVPRXXXXXXXXXXXXXXXXXXXXXXXXXXNGSSTQTNGAP 471
           +RIQYAKTKSDC A+A G + P                           NG   ++NG P
Sbjct: 82  MRIQYAKTKSDCIAEAEGVYDPNAKKKKKQEEKAERKKRAEEAQQSAPANGKPAESNGGP 141

Query: 472 SASHRQGKPGAQEATAPNSILFIQNLPHDTTGMMLEILFQQYPGFKEVRMIEAKPGIAFI 651
           + S RQG   AQE   PN+ILFIQNLPH+TT MML++LFQQYPGF+EVRMIEAKPGIAF+
Sbjct: 142 T-SFRQGNQSAQETVPPNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAKPGIAFV 200

Query: 652 EYEDELHSSMAMQ 690
           E+ED++ SSMAMQ
Sbjct: 201 EFEDDVQSSMAMQ 213


>ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
           gi|355517286|gb|AES98909.1| U1 small nuclear
           ribonucleoprotein A [Medicago truncatula]
           gi|388501104|gb|AFK38618.1| unknown [Medicago
           truncatula]
          Length = 233

 Score =  142 bits (358), Expect = 6e-32
 Identities = 74/133 (55%), Positives = 90/133 (67%)
 Frame = +1

Query: 292 LRIQYAKTKSDCFAKAAGTFVPRXXXXXXXXXXXXXXXXXXXXXXXXXXNGSSTQTNGAP 471
           +RIQYAKTKSDC AK  G+FVPR                           G+   +NG  
Sbjct: 82  MRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYADESKQSAVPNGGTHGASNGGS 141

Query: 472 SASHRQGKPGAQEATAPNSILFIQNLPHDTTGMMLEILFQQYPGFKEVRMIEAKPGIAFI 651
           +AS R G  GAQEA APN+ILFI+NLP++TTG MLE+LF+QYPGFKEVR+IEAKPGIAF+
Sbjct: 142 TASFRPGS-GAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPGIAFV 200

Query: 652 EYEDELHSSMAMQ 690
           ++ED+  SSMAMQ
Sbjct: 201 DFEDDGQSSMAMQ 213


Top