BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00007211
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   438   e-145
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-140
ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   393   e-133
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar...   380   e-126
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...   379   e-124

>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
            [Vitis vinifera]
          Length = 643

 Score =  438 bits (1127), Expect(2) = e-145
 Identities = 212/275 (77%), Positives = 236/275 (85%)
 Frame = +2

Query: 242  TFTGVLSACSHSGLVNEGMKFFGCMEKEYRIAPSIHHYGCMVDLLGRAGLLDQAYELISS 421
            T TGVLSACSH GLV++G+ FF  M K + I P+IHHYGCMVDLLGRAGLLDQAY+LI S
Sbjct: 374  TLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMS 433

Query: 422  MRVKPDATIWRTLLGACRIHKHATLGEVVAGHLIELKAQEVGDYVLLLNIYASVGNWEKV 601
            M +KPD+T+WRTLLGACRIH+HATLGE V GHLIELKAQE GDYVLLLNIY+SVGNW+KV
Sbjct: 434  MVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKV 493

Query: 602  ADVRRLMKEKGIKTTPGCSTVELHGKVHEFTVDDNSHPRTKEIYATLDEIEKQLKIAGYV 781
             D+R+ MKEKGI+T+PGCST+EL GKVHEF VDD  HPRT EIY  LDEI KQLKIAGYV
Sbjct: 494  TDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYV 553

Query: 782  SEISGELHKLGSEEKGNVLSYHSEKLAIFFPKKLAIAFGVLATPPGTTIRVAKNLRICID 961
            +E+S ELH LG+EEKGN LSYHSE        KLAIAFGVLATPPGTTIRVAKNLRIC+D
Sbjct: 554  AELSSELHNLGAEEKGNRLSYHSE--------KLAIAFGVLATPPGTTIRVAKNLRICVD 605

Query: 962  CHNFAKAVSSVYNREVVMRDRSRFHHFREGCCSCN 1066
            CHNFAK +S  YNREVV+RDR+RFHHFREG CSCN
Sbjct: 606  CHNFAKVLSGAYNREVVIRDRTRFHHFREGQCSCN 640



 Score =  105 bits (263), Expect(2) = e-145
 Identities = 51/88 (57%), Positives = 65/88 (73%)
 Frame = +1

Query: 1   LSFFDFMQTPEYGCKPDDVTCLLVLQACAHLGAREFGERIHCYIDENGYGNATKLKNSLI 180
           L  FD MQ+   G +PDDVTCLL+LQACA+LGA EFGER+H YI+E+GY  A  L NSLI
Sbjct: 254 LRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLI 313

Query: 181 AMYSRCGSVHKAFEVFQGMSDFHWGSFS 264
            MYSRCG + KA+ +F+ M + +  S+S
Sbjct: 314 TMYSRCGRLEKAYSIFKRMDERNVVSWS 341


>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530-like
            [Glycine max]
          Length = 579

 Score =  410 bits (1054), Expect(2) = e-140
 Identities = 196/275 (71%), Positives = 228/275 (82%)
 Frame = +2

Query: 242  TFTGVLSACSHSGLVNEGMKFFGCMEKEYRIAPSIHHYGCMVDLLGRAGLLDQAYELISS 421
            TFTGVLSACS+SG+V+EGM FF  M +E+ + P++HHYGCMVDLLGRAGLLD+AY+LI S
Sbjct: 310  TFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMS 369

Query: 422  MRVKPDATIWRTLLGACRIHKHATLGEVVAGHLIELKAQEVGDYVLLLNIYASVGNWEKV 601
            M VKPD+T+WRTLLGACRIH H TLGE V GHLIELKAQE GDYVLLLNIY+S G+WEKV
Sbjct: 370  MVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKV 429

Query: 602  ADVRRLMKEKGIKTTPGCSTVELHGKVHEFTVDDNSHPRTKEIYATLDEIEKQLKIAGYV 781
            A+VR+LMK K I+TTPGCST+EL G VHEF VDD SH R +EIY TLDEI  QL+IAGYV
Sbjct: 430  AEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYV 489

Query: 782  SEISGELHKLGSEEKGNVLSYHSEKLAIFFPKKLAIAFGVLATPPGTTIRVAKNLRICID 961
             E+S ELHK+  +EKG VLS+HSE        KLA+AFGVLATPPGT +RVA NLR+C+D
Sbjct: 490  VELSSELHKMDDKEKGYVLSHHSE--------KLAVAFGVLATPPGTILRVASNLRVCVD 541

Query: 962  CHNFAKAVSSVYNREVVMRDRSRFHHFREGCCSCN 1066
            CHNF K  S VYNR+VV+RD +RFHHFR G CSC+
Sbjct: 542  CHNFLKLFSGVYNRDVVLRDHNRFHHFRGGRCSCS 576



 Score =  115 bits (287), Expect(2) = e-140
 Identities = 57/88 (64%), Positives = 67/88 (76%)
 Frame = +1

Query: 1   LSFFDFMQTPEYGCKPDDVTCLLVLQACAHLGAREFGERIHCYIDENGYGNATKLKNSLI 180
           LS FD MQ   Y C+PDDVTCLL+LQACAHL A EFGERIH YI E GY +A  L NSLI
Sbjct: 190 LSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLI 249

Query: 181 AMYSRCGSVHKAFEVFQGMSDFHWGSFS 264
           +MYSRCG + KA+EVF+GM + +  S+S
Sbjct: 250 SMYSRCGCLDKAYEVFKGMGNKNVVSWS 277


>ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g47530-like [Glycine max]
          Length = 515

 Score =  393 bits (1009), Expect(2) = e-133
 Identities = 192/276 (69%), Positives = 222/276 (80%), Gaps = 1/276 (0%)
 Frame = +2

Query: 242  TFTGVLSACSHSGLVNEGM-KFFGCMEKEYRIAPSIHHYGCMVDLLGRAGLLDQAYELIS 418
            T TGVLSACS+SG+V+EGM  FF  M +E+ + P++HHYGCMVDLLG AGLLD+A +LI 
Sbjct: 245  TLTGVLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLDKAXQLIM 304

Query: 419  SMRVKPDATIWRTLLGACRIHKHATLGEVVAGHLIELKAQEVGDYVLLLNIYASVGNWEK 598
            SM  KPD+T WRTLLGACRIH H TLGE V GHLIELKAQE GD+VLLLNIY+S G+WEK
Sbjct: 305  SMVEKPDSTTWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDHVLLLNIYSSAGHWEK 364

Query: 599  VADVRRLMKEKGIKTTPGCSTVELHGKVHEFTVDDNSHPRTKEIYATLDEIEKQLKIAGY 778
            VA+VR+LMK K I+TTPGCST+EL G VHEF VDD SH R  EIY TLDEI  QL+IAGY
Sbjct: 365  VAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETLDEINHQLRIAGY 424

Query: 779  VSEISGELHKLGSEEKGNVLSYHSEKLAIFFPKKLAIAFGVLATPPGTTIRVAKNLRICI 958
            V E+S ELHK+  +EKG VLS+HSE        KLAIAFGVLATPPGTT+RVA NLRIC+
Sbjct: 425  VVELSSELHKMDDKEKGYVLSHHSE--------KLAIAFGVLATPPGTTLRVANNLRICV 476

Query: 959  DCHNFAKAVSSVYNREVVMRDRSRFHHFREGCCSCN 1066
            DC NF K  S VYN +V++RD +RFHHFR GCCSC+
Sbjct: 477  DCFNFLKHFSGVYNGDVILRDHNRFHHFRGGCCSCS 512



 Score =  111 bits (278), Expect(2) = e-133
 Identities = 54/88 (61%), Positives = 66/88 (75%)
 Frame = +1

Query: 1   LSFFDFMQTPEYGCKPDDVTCLLVLQACAHLGAREFGERIHCYIDENGYGNATKLKNSLI 180
           LS FD +Q   Y C+PDDVTCLL+LQACAHL A EFGERIH Y+ E+GYG A  L N+LI
Sbjct: 125 LSLFDVLQNSSYKCEPDDVTCLLLLQACAHLYALEFGERIHGYMMEHGYGGALNLSNALI 184

Query: 181 AMYSRCGSVHKAFEVFQGMSDFHWGSFS 264
           +MYSRCG + KA EVF+G  + +  S+S
Sbjct: 185 SMYSRCGCLDKAXEVFKGTGNKNVVSWS 212


>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g47530 gi|6522536|emb|CAB61979.1| putative protein
            [Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332644772|gb|AEE78293.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  380 bits (976), Expect(2) = e-126
 Identities = 190/277 (68%), Positives = 216/277 (77%), Gaps = 2/277 (0%)
 Frame = +2

Query: 242  TFTGVLSACSHSGLVNEGMKFFGCMEK-EYRIAPSIHHYGCMVDLLGRAGLLDQAYELIS 418
            T TG+LSACSHSGLV EGM FF  M   E++I P++HHYGC+VDLLGRA LLD+AY LI 
Sbjct: 320  TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379

Query: 419  SMRVKPDATIWRTLLGACRIHKHATLGEVVAGHLIELKAQEVGDYVLLLNIYASVGNWEK 598
            SM +KPD+TIWRTLLGACR+H    LGE V  HLIELKA+E GDYVLLLN Y++VG WEK
Sbjct: 380  SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439

Query: 599  VADVRRLMKEKGIKTTPGCSTVELHGKVHEFTVDDNSHPRTKEIYATLDEIEKQLKIAGY 778
            V ++R LMKEK I T PGCS +EL G VHEF VDD SHPR +EIY  L EI +QLKIAGY
Sbjct: 440  VTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499

Query: 779  VSEISGELHKLGS-EEKGNVLSYHSEKLAIFFPKKLAIAFGVLATPPGTTIRVAKNLRIC 955
            V+EI+ ELH L S EEKG  L YHSE        KLAIAFG+L TPPGTTIRV KNLR C
Sbjct: 500  VAEITSELHNLESEEEKGYALRYHSE--------KLAIAFGILVTPPGTTIRVTKNLRTC 551

Query: 956  IDCHNFAKAVSSVYNREVVMRDRSRFHHFREGCCSCN 1066
            +DCHNFAK VS VY+R V++RDRSRFHHF+ G CSCN
Sbjct: 552  VDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCN 588



 Score = 99.4 bits (246), Expect(2) = e-126
 Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   LSFFDFMQTPEYGC-KPDDVTCLLVLQACAHLGAREFGERIHCYIDENGYGNATKLKNSL 177
           L  FD M+    GC KPD VTCLL LQACA+LGA +FG+++H +IDENG   A  L N+L
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258

Query: 178 IAMYSRCGSVHKAFEVFQGMSD 243
           ++MYSRCGS+ KA++VF GM +
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRE 280


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297323404|gb|EFH53825.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 591

 Score =  379 bits (973), Expect(2) = e-124
 Identities = 188/277 (67%), Positives = 217/277 (78%), Gaps = 2/277 (0%)
 Frame = +2

Query: 242  TFTGVLSACSHSGLVNEGMKFFGCMEK-EYRIAPSIHHYGCMVDLLGRAGLLDQAYELIS 418
            T TG+LSACSHSGLV+EGM FF  M   E++I P++HHYGC+VDLLGRA LLD+AY LI 
Sbjct: 320  TLTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIK 379

Query: 419  SMRVKPDATIWRTLLGACRIHKHATLGEVVAGHLIELKAQEVGDYVLLLNIYASVGNWEK 598
            SM +KPD+TIWRTLLGACR+H +  LGE V  HLIE KA+E GDYVLLLN Y+SVG WEK
Sbjct: 380  SMEMKPDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEK 439

Query: 599  VADVRRLMKEKGIKTTPGCSTVELHGKVHEFTVDDNSHPRTKEIYATLDEIEKQLKIAGY 778
            V ++R LMK+K I+T PGCS +EL G VHEF VDD SHPR +EIY  L EI +QLKIAGY
Sbjct: 440  VTELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499

Query: 779  VSEISGELHKLGS-EEKGNVLSYHSEKLAIFFPKKLAIAFGVLATPPGTTIRVAKNLRIC 955
            V+EI+ ELH L S EEKG  L YHSE        KLAIAFG+L TPP TTIRV KNLR C
Sbjct: 500  VAEITSELHNLDSEEEKGYALRYHSE--------KLAIAFGILVTPPETTIRVTKNLRTC 551

Query: 956  IDCHNFAKAVSSVYNREVVMRDRSRFHHFREGCCSCN 1066
            +DCHNFAK VS VY+R V++RDRSRFHHF+ G CSCN
Sbjct: 552  VDCHNFAKFVSDVYDRVVIVRDRSRFHHFKGGSCSCN 588



 Score = 95.5 bits (236), Expect(2) = e-124
 Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   LSFFDFMQTPEYGC-KPDDVTCLLVLQACAHLGAREFGERIHCYIDENGYGNATKLKNSL 177
           L  FD M+     C KPD+VTCLL LQACA+LGA +FG+++H +IDENG   A  L N+L
Sbjct: 199 LVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258

Query: 178 IAMYSRCGSVHKAFEVFQGMSD 243
           ++MYSRCGS+ KA+EVF  M +
Sbjct: 259 VSMYSRCGSMDKAYEVFNRMRE 280