BLASTX nr result
ID: Aconitum21_contig00007019
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00007019
(1161 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|2... 417 e-114
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put... 400 e-109
ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM... 398 e-108
ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis... 395 e-108
emb|CAA66406.1| orf12 [Arabidopsis thaliana] 395 e-108
>ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|222861836|gb|EEE99378.1|
predicted protein [Populus trichocarpa]
Length = 382
Score = 417 bits (1073), Expect = e-114
Identities = 196/269 (72%), Positives = 236/269 (87%)
Frame = +2
Query: 5 VFPLELDVEHNIEGVKVTLLEANHCPGAALIHFRLRDGRCYLHTGDFRASKLMHSHPLLA 184
+ PLELD E+ I+GVKVTLLEANHCPGAAL+HFRL G CYLHTGDFRASKLM +HPLLA
Sbjct: 113 IHPLELDTEYVIQGVKVTLLEANHCPGAALLHFRLPTGLCYLHTGDFRASKLMQAHPLLA 172
Query: 185 RYRVNLLYLDTTYCDSKYRFPSKEDVLDFVVKVARQNLKKQPKTLIVVGAYSIGKECVYL 364
RVN+LYLDTTYC+ KY+FPSKEDVL +VV+V + +LKKQPKTL+VVGAYSIGKE VYL
Sbjct: 173 NNRVNVLYLDTTYCNPKYKFPSKEDVLSYVVRVTKSSLKKQPKTLVVVGAYSIGKESVYL 232
Query: 365 ALSEALGVKIHANASRRRILQSFDWPELTGKLCSRGQETPLHVLPLSTLKHETLKKYLDS 544
A+S+ALGVKI+AN SRRRILQSF WP+L+ LC++ +T LHVLP+S+L++ETLK YL +
Sbjct: 233 AISKALGVKIYANNSRRRILQSFGWPDLSTNLCTKAIDTCLHVLPISSLRYETLKDYLKN 292
Query: 545 YASEYKSVLAFRPTGWTYSETVGNQLDMIKPSLKGNITIYGVPYSEHSSFLELRQFVQFL 724
+ ++Y +VLAFRPTGWTYSE +G +LD+I+PS +GNITIYGVPYSEHSSF ELR FV+FL
Sbjct: 293 HVNQYAAVLAFRPTGWTYSEGLGRELDLIRPSTRGNITIYGVPYSEHSSFTELRDFVEFL 352
Query: 725 KPDKIIPTVNVGNAATRDKMESYFKQWMK 811
KPDKIIPTVNVGN RDKM+SYF++W+K
Sbjct: 353 KPDKIIPTVNVGNPDNRDKMQSYFREWLK 381
>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis]
gi|223547811|gb|EEF49303.1| DNA cross-link repair protein
pso2/snm1, putative [Ricinus communis]
Length = 493
Score = 400 bits (1028), Expect = e-109
Identities = 184/269 (68%), Positives = 236/269 (87%)
Frame = +2
Query: 5 VFPLELDVEHNIEGVKVTLLEANHCPGAALIHFRLRDGRCYLHTGDFRASKLMHSHPLLA 184
+ PL+L+ E+ IEGV+VTLLEANHCPGAAL+HFRL +G CYLHTGDFRASK+M S+ LL
Sbjct: 224 IHPLDLNTEYAIEGVRVTLLEANHCPGAALLHFRLSNGLCYLHTGDFRASKVMQSYHLLV 283
Query: 185 RYRVNLLYLDTTYCDSKYRFPSKEDVLDFVVKVARQNLKKQPKTLIVVGAYSIGKECVYL 364
+VN LYLDTTYC+ KY+FPSKEDVL++VV+V + LK+QP+TLIVVGAYSIGKECVYL
Sbjct: 284 NQKVNALYLDTTYCNPKYKFPSKEDVLNYVVRVTKDFLKQQPETLIVVGAYSIGKECVYL 343
Query: 365 ALSEALGVKIHANASRRRILQSFDWPELTGKLCSRGQETPLHVLPLSTLKHETLKKYLDS 544
++S+ALGVKI+A+ASRR+IL+SF W +L+ LC++ ++TPLHVLP+S+L+ ETLK YL
Sbjct: 344 SISKALGVKIYASASRRQILESFGWSDLSRSLCTQPKDTPLHVLPISSLRVETLKDYLKK 403
Query: 545 YASEYKSVLAFRPTGWTYSETVGNQLDMIKPSLKGNITIYGVPYSEHSSFLELRQFVQFL 724
Y ++Y++VLAFRPTGWTYSE VG +LD+I+P KGN+TIYGVPYSEHSSF EL++FV+FL
Sbjct: 404 YINQYRAVLAFRPTGWTYSENVGKKLDLIRPISKGNVTIYGVPYSEHSSFTELKEFVEFL 463
Query: 725 KPDKIIPTVNVGNAATRDKMESYFKQWMK 811
KPDKIIPTVNVGN R+KM+S+F++W++
Sbjct: 464 KPDKIIPTVNVGNPTNREKMQSHFREWLE 492
>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
Length = 505
Score = 398 bits (1023), Expect = e-108
Identities = 187/269 (69%), Positives = 229/269 (85%)
Frame = +2
Query: 5 VFPLELDVEHNIEGVKVTLLEANHCPGAALIHFRLRDGRCYLHTGDFRASKLMHSHPLLA 184
+ PLE + EH I+GVKVTLLEANHCPGAALIHF L +G+ YLHTGDFRA KLM ++ LL
Sbjct: 236 IHPLEFNEEHVIDGVKVTLLEANHCPGAALIHFNLPNGQRYLHTGDFRACKLMQAYHLLV 295
Query: 185 RYRVNLLYLDTTYCDSKYRFPSKEDVLDFVVKVARQNLKKQPKTLIVVGAYSIGKECVYL 364
RVN+LYLDTTYC+ KYRFPSKE+VL++VVK+ + +LK P+TL+VVGAYSIGKECVYL
Sbjct: 296 NQRVNVLYLDTTYCNPKYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVGAYSIGKECVYL 355
Query: 365 ALSEALGVKIHANASRRRILQSFDWPELTGKLCSRGQETPLHVLPLSTLKHETLKKYLDS 544
A+S+ALGVKI+ANASRRRILQ+F WP+L+ KLC+ G T LHVLP+S+L+ ETLK YL +
Sbjct: 356 AISKALGVKIYANASRRRILQAFGWPDLSDKLCTNGNNTLLHVLPMSSLRVETLKDYLKT 415
Query: 545 YASEYKSVLAFRPTGWTYSETVGNQLDMIKPSLKGNITIYGVPYSEHSSFLELRQFVQFL 724
Y ++ ++LAFRPTGWT+SE + N L++IKP KGNITIYGVPYSEHSSF EL+ FVQ L
Sbjct: 416 YKEQFTAILAFRPTGWTFSEKISNDLELIKPVSKGNITIYGVPYSEHSSFSELQDFVQVL 475
Query: 725 KPDKIIPTVNVGNAATRDKMESYFKQWMK 811
+PDKIIPTVNVGNAA R+KM+SYF+ W+K
Sbjct: 476 RPDKIIPTVNVGNAANREKMQSYFRDWLK 504
>ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|30688447|ref|NP_850635.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|79313637|ref|NP_001030773.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA
cross-link repair protein SNM1; Short=AtSNM1
gi|1402886|emb|CAA66817.1| hypothetical protein
[Arabidopsis thaliana] gi|11994302|dbj|BAB01732.1|
unnamed protein product [Arabidopsis thaliana]
gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis
thaliana] gi|28827378|gb|AAO50533.1| unknown protein
[Arabidopsis thaliana] gi|332643675|gb|AEE77196.1| DNA
cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643676|gb|AEE77197.1| DNA cross-link repair protein
SNM1 [Arabidopsis thaliana] gi|332643677|gb|AEE77198.1|
DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
Length = 484
Score = 395 bits (1016), Expect = e-108
Identities = 186/269 (69%), Positives = 228/269 (84%)
Frame = +2
Query: 5 VFPLELDVEHNIEGVKVTLLEANHCPGAALIHFRLRDGRCYLHTGDFRASKLMHSHPLLA 184
+ PLELDVE+ I G+KVTL+EANHCPGAALIHFRL DG CYLHTGDFRASK M +HPLL
Sbjct: 215 IHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLLF 274
Query: 185 RYRVNLLYLDTTYCDSKYRFPSKEDVLDFVVKVARQNLKKQPKTLIVVGAYSIGKECVYL 364
RV++LYLDTTYC+ +Y+FPSKEDVL +VV++ + L+KQPKTLIVVG+YSIGKECVYL
Sbjct: 275 NQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVYL 334
Query: 365 ALSEALGVKIHANASRRRILQSFDWPELTGKLCSRGQETPLHVLPLSTLKHETLKKYLDS 544
A+++ALGVKI ANASRRRILQSF W +++ L + G+ T LHVLP+S+LK E L ++L
Sbjct: 335 AIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLDEHLKI 394
Query: 545 YASEYKSVLAFRPTGWTYSETVGNQLDMIKPSLKGNITIYGVPYSEHSSFLELRQFVQFL 724
Y +Y +VLAFRPTGWTYSE +G LD+IKP+ +G ITIYGVPYSEHSSF ELR+FVQFL
Sbjct: 395 YREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFL 454
Query: 725 KPDKIIPTVNVGNAATRDKMESYFKQWMK 811
+PDKIIPTVN GNA TR+KM+S F++W++
Sbjct: 455 RPDKIIPTVNNGNAGTREKMQSCFREWLR 483
>emb|CAA66406.1| orf12 [Arabidopsis thaliana]
Length = 484
Score = 395 bits (1016), Expect = e-108
Identities = 186/269 (69%), Positives = 228/269 (84%)
Frame = +2
Query: 5 VFPLELDVEHNIEGVKVTLLEANHCPGAALIHFRLRDGRCYLHTGDFRASKLMHSHPLLA 184
+ PLELDVE+ I G+KVTL+EANHCPGAALIHFRL DG CYLHTGDFRASK M +HPLL
Sbjct: 215 IHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLLF 274
Query: 185 RYRVNLLYLDTTYCDSKYRFPSKEDVLDFVVKVARQNLKKQPKTLIVVGAYSIGKECVYL 364
RV++LYLDTTYC+ +Y+FPSKEDVL +VV++ + L+KQPKTLIVVG+YSIGKECVYL
Sbjct: 275 NQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVYL 334
Query: 365 ALSEALGVKIHANASRRRILQSFDWPELTGKLCSRGQETPLHVLPLSTLKHETLKKYLDS 544
A+++ALGVKI ANASRRRILQSF W +++ L + G+ T LHVLP+S+LK E L ++L
Sbjct: 335 AIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLDEHLKI 394
Query: 545 YASEYKSVLAFRPTGWTYSETVGNQLDMIKPSLKGNITIYGVPYSEHSSFLELRQFVQFL 724
Y +Y +VLAFRPTGWTYSE +G LD+IKP+ +G ITIYGVPYSEHSSF ELR+FVQFL
Sbjct: 395 YREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFL 454
Query: 725 KPDKIIPTVNVGNAATRDKMESYFKQWMK 811
+PDKIIPTVN GNA TR+KM+S F++W++
Sbjct: 455 RPDKIIPTVNNGNAGTREKMQSCFREWLR 483