BLASTX nr result

ID: Aconitum21_contig00006485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00006485
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555946.1| PREDICTED: probable splicing factor 3A subun...   240   2e-61
ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subun...   239   7e-61
ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subun...   238   2e-60
ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subun...   236   5e-60
ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subun...   230   3e-58

>ref|XP_003555946.1| PREDICTED: probable splicing factor 3A subunit 1-like isoform 1
           [Glycine max] gi|356575642|ref|XP_003555947.1|
           PREDICTED: probable splicing factor 3A subunit 1-like
           isoform 2 [Glycine max]
          Length = 798

 Score =  240 bits (613), Expect = 2e-61
 Identities = 123/191 (64%), Positives = 140/191 (73%)
 Frame = -1

Query: 575 MLGSXXXXXXXXXPSDGNLGPLPASQVLENTPPNDSSXXXXXXXXXATHTRTIGIIYPPP 396
           MLGS         PSDGNLGPLP SQV+E      +S          THTRTIGII+PPP
Sbjct: 1   MLGSLPILPLPAPPSDGNLGPLPESQVIEEEQNKSNSASVPAPATVVTHTRTIGIIHPPP 60

Query: 395 DIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLSASDPYHAYYQHRLSEFRSQAPP 216
           DIR+IVDKT QFVAKNGP+FE+RI++NN GN KFNFL++SDPYHAYYQHRLSEFR+Q   
Sbjct: 61  DIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 120

Query: 215 TPSQTSDTSETAVAPSTADDSESLAAADTKPDPSAQFRPVRKVLEPPEAEQYTVRLPEGI 36
           +  Q       +  P +A DS +  AA  KPD SAQF+PVRKVL+PPEAEQYTVRLPEGI
Sbjct: 121 SGQQPPPQPADSAVPESAPDSNNGVAAAEKPDVSAQFKPVRKVLDPPEAEQYTVRLPEGI 180

Query: 35  TGEELDIIKLT 3
           TGEELDIIKLT
Sbjct: 181 TGEELDIIKLT 191


>ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subunit 1-like [Vitis
           vinifera]
          Length = 814

 Score =  239 bits (609), Expect = 7e-61
 Identities = 131/202 (64%), Positives = 148/202 (73%), Gaps = 11/202 (5%)
 Frame = -1

Query: 575 MLGSXXXXXXXXXPSDGNLGPLPASQVL-----ENTPPNDSSXXXXXXXXXATHTRTIGI 411
           MLG+         PSDGNLGPLP SQ+      EN    + +         ATHTRTIGI
Sbjct: 1   MLGAFPILPLPAPPSDGNLGPLPLSQLQDQTTDENVETEEKNKVNSAPASVATHTRTIGI 60

Query: 410 IYPPPDIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLSASDPYHAYYQHRLSEFR 231
           I+PPPDIR+IVDKT QFVAKNGP+FE+RI++NN GNAKFNFL+ SDPYHAYYQHRLSEFR
Sbjct: 61  IHPPPDIRNIVDKTAQFVAKNGPEFEKRIIANNAGNAKFNFLNGSDPYHAYYQHRLSEFR 120

Query: 230 SQ----APPTPSQTSDTSETAVAPST--ADDSESLAAADTKPDPSAQFRPVRKVLEPPEA 69
           SQ    A   PSQ +D+S    APS   AD+SE++     KPDPSAQF+PVRKVLEPPE 
Sbjct: 121 SQNQSSAQQPPSQPADSSAPESAPSAPHADNSETV----VKPDPSAQFKPVRKVLEPPET 176

Query: 68  EQYTVRLPEGITGEELDIIKLT 3
           EQYTVRLPEGITGEELDIIKLT
Sbjct: 177 EQYTVRLPEGITGEELDIIKLT 198


>ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 802

 Score =  238 bits (606), Expect = 2e-60
 Identities = 128/196 (65%), Positives = 143/196 (72%), Gaps = 4/196 (2%)
 Frame = -1

Query: 578 IMLGSXXXXXXXXXPSDGNLGPLPASQVLENTPPNDSSXXXXXXXXXATHTRTIGIIYPP 399
           +MLGS         PSDGNLGPLP SQV+E      +S         ATHTRTIGII+PP
Sbjct: 1   MMLGSLPILPLPAPPSDGNLGPLPESQVIEEEQNQSNSASVPAPVTVATHTRTIGIIHPP 60

Query: 398 PDIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLSASDPYHAYYQHRLSEFRSQAP 219
           PDIR+IVDKT QFVAKNGP+FE+RI++NN GNAKFNFL++SDPYHAYYQHRLSEFR+Q  
Sbjct: 61  PDIRTIVDKTAQFVAKNGPEFEKRIVANNTGNAKFNFLNSSDPYHAYYQHRLSEFRAQ-N 119

Query: 218 PTPSQTSDTSETAVAPSTADDSESL----AAADTKPDPSAQFRPVRKVLEPPEAEQYTVR 51
            +  Q       AV  S   DS  +    AAA  KPD SAQF+PVRKVLEPPEAEQYTVR
Sbjct: 120 QSSGQQQPADSAAVPESVPSDSNGVVAAAAAAAEKPDFSAQFKPVRKVLEPPEAEQYTVR 179

Query: 50  LPEGITGEELDIIKLT 3
           LPEGITGEELDIIKLT
Sbjct: 180 LPEGITGEELDIIKLT 195


>ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 801

 Score =  236 bits (602), Expect = 5e-60
 Identities = 128/193 (66%), Positives = 145/193 (75%), Gaps = 2/193 (1%)
 Frame = -1

Query: 575 MLGSXXXXXXXXXPSDGNLGPLPASQVLENTPPNDS-SXXXXXXXXXATHTRTIGIIYPP 399
           MLGS         PSDGNLGPLP SQV++N   N S S         ATHTRTIGII+PP
Sbjct: 1   MLGSLPILPLPAPPSDGNLGPLPESQVIDNEEQNKSNSVSVPAPATVATHTRTIGIIHPP 60

Query: 398 PDIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLSASDPYHAYYQHRLSEFRSQAP 219
           PDIR+IVDKT QFVAKNGP+FE+RI++NN GN KFNFL++SDPYHAYYQHRLSEFR+Q  
Sbjct: 61  PDIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120

Query: 218 PTPSQ-TSDTSETAVAPSTADDSESLAAADTKPDPSAQFRPVRKVLEPPEAEQYTVRLPE 42
            +  Q  S  +++AV  S   DS  +AAA  K D SAQF+ VRKVLEPPEAEQYTVRLPE
Sbjct: 121 SSGLQPPSQPADSAVPESAPSDSNGVAAAAEKIDVSAQFKAVRKVLEPPEAEQYTVRLPE 180

Query: 41  GITGEELDIIKLT 3
           GITGEELDIIKLT
Sbjct: 181 GITGEELDIIKLT 193


>ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 806

 Score =  230 bits (586), Expect = 3e-58
 Identities = 126/199 (63%), Positives = 143/199 (71%), Gaps = 7/199 (3%)
 Frame = -1

Query: 578 IMLGSXXXXXXXXXPSDGNLGPLPASQVLENTPPNDS---SXXXXXXXXXATHTRTIGII 408
           +MLGS         PSDGNLGPLP SQV+++     +   S         ATHTRTIGII
Sbjct: 1   MMLGSLPILPLPAPPSDGNLGPLPESQVIDDNEEEQNKSNSASVPAPATVATHTRTIGII 60

Query: 407 YPPPDIRSIVDKTVQFVAKNGPDFERRIMSNNQGNAKFNFLSASDPYHAYYQHRLSEFRS 228
           +PPPDIR+IVDKT QFVAKNGP+FE+RI++NN GN KFNFL++SDPYHAYYQHRLSEFR+
Sbjct: 61  HPPPDIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLSEFRA 120

Query: 227 QAPPTPSQTSDTSETAVAPSTADDSESL----AAADTKPDPSAQFRPVRKVLEPPEAEQY 60
           Q   +  Q       AV  S   DS  +    AAA  KPD SAQF+PVRKVLEPPEAEQY
Sbjct: 121 Q-NQSSGQQQPADSAAVPESVPSDSNGVVAAAAAAAEKPDFSAQFKPVRKVLEPPEAEQY 179

Query: 59  TVRLPEGITGEELDIIKLT 3
           TVRLPEGITGEELDIIKLT
Sbjct: 180 TVRLPEGITGEELDIIKLT 198


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