BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00006309
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi...   316   9e-84
ref|XP_002312938.1| predicted protein [Populus trichocarpa] gi|2...   312   9e-83
ref|XP_002884032.1| pentatricopeptide repeat-containing protein ...   308   1e-81
dbj|BAF01049.1| hypothetical protein [Arabidopsis thaliana]           306   9e-81
ref|NP_565402.1| pentatricopeptide repeat-containing protein [Ar...   306   9e-81

>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
            [Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
            protein product [Vitis vinifera]
          Length = 435

 Score =  316 bits (809), Expect = 9e-84
 Identities = 168/330 (50%), Positives = 225/330 (68%), Gaps = 3/330 (0%)
 Frame = +2

Query: 2    KQGFDDEAEILIHGCIHRLESQE--IAMFYSDLIRAFSEYGCKESFVNYTSRLKRIIASC 175
            KQG   EAE L+   + +L S+E  +  FY +LI + S++   +   +  SRL RI++  
Sbjct: 109  KQGQLKEAETLVSETLIKLGSRERDLVSFYCNLIDSHSKHSSNQGVFDVISRLSRIVSES 168

Query: 176  SS-FNSRKAFEAMINGYSNLDLPREAEVVVEEMRDAGFRVEGFELRSILLAYGRLGLLSE 352
            SS +   +A+++MI+    + LP EAE ++EEMR  G +   FE RS++  YGR+GL  +
Sbjct: 169  SSVYVKERAYKSMISSLCAVGLPLEAENLIEEMRVKGLKPSVFEFRSVVYGYGRVGLSED 228

Query: 353  MKRVLDQMEKFGCKFDTICFNMVLSCYGAHGELSEMALWIEKMKRLNIPLSVRTYNSVLN 532
            M+R+L QM   G + DT+  NMVLS YGA+ + SEM  W+++MK  +IP S+RTYNSVLN
Sbjct: 229  MQRILLQMGNEGFELDTVVSNMVLSSYGAYNKQSEMVSWLQRMKNSSIPFSIRTYNSVLN 288

Query: 533  SCPAIISLIQHPKSMPLSIRELMENLQRSGKEEEALVIRGLMDSSVLVERLEWSCMEGKL 712
            SCP I+S++Q  K+ P +I ELME L    K +EAL+++ L+ S VL E +EW C EGKL
Sbjct: 289  SCPMIMSILQDLKTFPPTIDELMETL----KGDEALLVKELIGSMVLAELMEWDCSEGKL 344

Query: 713  DLHGMHLGSAYVIMLQWIEELRLRLYSEFSTIPADITVVCGLGKHSSVRRVSPVKALVSE 892
            DLHGMHLGSAY+IMLQW EELR RL +    +P +ITVVCG GKHSSVR  SPVK +V E
Sbjct: 345  DLHGMHLGSAYLIMLQWREELRYRLNAAEYVMPVEITVVCGSGKHSSVRGESPVKRMVRE 404

Query: 893  MMVRLQSPMKIQRNNVGCFVAKGRNVTKWL 982
            MM R +SPMKI R N+GCFVAK + V  WL
Sbjct: 405  MMTRTRSPMKIDRKNIGCFVAKAKVVKNWL 434


>ref|XP_002312938.1| predicted protein [Populus trichocarpa] gi|222849346|gb|EEE86893.1|
            predicted protein [Populus trichocarpa]
          Length = 473

 Score =  312 bits (800), Expect = 9e-83
 Identities = 163/331 (49%), Positives = 229/331 (69%), Gaps = 4/331 (1%)
 Frame = +2

Query: 2    KQGFDDEAEILIHGCIHRLE--SQEIAMFYSDLIRAFSEYGCKESFVNYTSRLKRIIASC 175
            KQG D E + L+   + RL+   +E+ +FY +LI   S++     F +  SRL + ++  
Sbjct: 146  KQGLDKELKALMSETVSRLQFKERELVLFYCNLIGFNSKHNWVRGFDDSYSRLNQFVSDS 205

Query: 176  SS-FNSRKAFEAMINGYSNLDLPREAEVVVEEMRDAGFRVEGFELRSILLAYGRLGLLSE 352
            +S +  ++ ++AMI+G   +   REAE ++ EMR+ G + + FE R +L  YGRLGL  +
Sbjct: 206  NSVYVKKQGYKAMISGLCEMGRAREAEDLIGEMRERGLKPKLFEFRCVLYGYGRLGLFKD 265

Query: 353  MKRVLDQMEKFGCKFDTICFNMVLSCYGAHGELSEMALWIEKMKRLNIPLSVRTYNSVLN 532
            M+R+LD+ME    + DT+C NMVL+ YGAH  L EM LW+ KMK L IPLS+RT NSVLN
Sbjct: 266  MERILDKMESGEIEVDTVCANMVLASYGAHNALPEMGLWLRKMKTLGIPLSIRTCNSVLN 325

Query: 533  SCPAIISLIQH-PKSMPLSIRELMENLQRSGKEEEALVIRGLMDSSVLVERLEWSCMEGK 709
            SCP I++L+++   S P+SI+EL++ L     EEEA++++ L++SSVL E  +W   EGK
Sbjct: 326  SCPTIMALMRNLDASYPVSIQELLKILS----EEEAMLVKELIESSVLKEATKWDTSEGK 381

Query: 710  LDLHGMHLGSAYVIMLQWIEELRLRLYSEFSTIPADITVVCGLGKHSSVRRVSPVKALVS 889
            LDLHGMHLGSAYVIMLQW+EE R RL      IPA+ITVVCG G HS+VR  SPVK++++
Sbjct: 382  LDLHGMHLGSAYVIMLQWMEETRNRLSDGEHVIPAEITVVCGSGNHSTVRGESPVKSMIT 441

Query: 890  EMMVRLQSPMKIQRNNVGCFVAKGRNVTKWL 982
            ++M + +SPM+I R N+GCFVAKG  V KWL
Sbjct: 442  QIMAQTRSPMRIDRKNIGCFVAKGNVVKKWL 472


>ref|XP_002884032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329872|gb|EFH60291.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 504

 Score =  308 bits (790), Expect = 1e-81
 Identities = 161/325 (49%), Positives = 222/325 (68%), Gaps = 3/325 (0%)
 Frame = +2

Query: 17   DEAEILIHGCIHRLESQE--IAMFYSDLIRAFSEYGCKESFVNYTSRLK-RIIASCSSFN 187
            DE+E L+   + RL+S E   A+F  +L+ + S+ G  + F     RL+ RI  S S + 
Sbjct: 182  DESETLLSTAVSRLKSNERDFALFLCNLVESNSKQGSIQGFNEACFRLRERIQRSSSVYV 241

Query: 188  SRKAFEAMINGYSNLDLPREAEVVVEEMRDAGFRVEGFELRSILLAYGRLGLLSEMKRVL 367
              +A+++M+ G  N+D P +AE V+EEMR    +   FE +S+L  YGRLGL  +M RV+
Sbjct: 242  KTQAYKSMVAGLCNMDQPHDAERVIEEMRVEKIKPGSFEHKSVLYGYGRLGLFDDMNRVV 301

Query: 368  DQMEKFGCKFDTICFNMVLSCYGAHGELSEMALWIEKMKRLNIPLSVRTYNSVLNSCPAI 547
             +ME  G K DT+C NMVLS YGAH  L +M  W++K+K  N+P S+RTYNSVLNSCP I
Sbjct: 302  HRMETEGHKIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTI 361

Query: 548  ISLIQHPKSMPLSIRELMENLQRSGKEEEALVIRGLMDSSVLVERLEWSCMEGKLDLHGM 727
            +SL++   S P+S+ EL   L     E+EAL++  L  S+VL E +EW+ +EGKLDLHGM
Sbjct: 362  MSLLKDLNSCPVSLSELRTFLN----EDEALLVLELTQSTVLDEAIEWNAVEGKLDLHGM 417

Query: 728  HLGSAYVIMLQWIEELRLRLYSEFSTIPADITVVCGLGKHSSVRRVSPVKALVSEMMVRL 907
            HL S+Y+I+LQW++E+RLR   +   IPA+I VV G GKHS+VR  SPVKALV ++MVR 
Sbjct: 418  HLSSSYLILLQWMDEIRLRFRDQKCVIPAEIVVVSGSGKHSNVRGESPVKALVKKIMVRT 477

Query: 908  QSPMKIQRNNVGCFVAKGRNVTKWL 982
            +SPM+I R NVG F+AKG+NV +WL
Sbjct: 478  ESPMRIDRKNVGSFIAKGKNVKEWL 502


>dbj|BAF01049.1| hypothetical protein [Arabidopsis thaliana]
          Length = 501

 Score =  306 bits (783), Expect = 9e-81
 Identities = 162/330 (49%), Positives = 221/330 (66%), Gaps = 3/330 (0%)
 Frame = +2

Query: 2    KQGFDDEAEILIHGCIHRLESQE--IAMFYSDLIRAFSEYGCKESFVNYTSRLKRIIASC 175
            KQ   DE+E L+   + RL+S E    +F  +L+ + S+ G  + F   + RL+ II   
Sbjct: 174  KQERFDESETLLSTAVSRLKSNERDFTLFLCNLVESNSKQGSIQGFSEASFRLREIIQRS 233

Query: 176  SS-FNSRKAFEAMINGYSNLDLPREAEVVVEEMRDAGFRVEGFELRSILLAYGRLGLLSE 352
            SS +   +A+++M++G  N+D P +AE V+EEMR    +   FE +S+L  YGRLGL  +
Sbjct: 234  SSVYVKTQAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEYKSVLYGYGRLGLFDD 293

Query: 353  MKRVLDQMEKFGCKFDTICFNMVLSCYGAHGELSEMALWIEKMKRLNIPLSVRTYNSVLN 532
            M RV+ +M   G K DT+C NMVLS YGAH  L +M  W++K+K  N+P S+RTYNSVLN
Sbjct: 294  MNRVVHRMGTEGHKIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFSIRTYNSVLN 353

Query: 533  SCPAIISLIQHPKSMPLSIRELMENLQRSGKEEEALVIRGLMDSSVLVERLEWSCMEGKL 712
            SCP IIS+++   S P+S+ EL   L     E+EAL++  L  SSVL E +EW+ +EGKL
Sbjct: 354  SCPTIISMLKDLDSCPVSLSELRTFLN----EDEALLVHELTQSSVLDEAIEWNAVEGKL 409

Query: 713  DLHGMHLGSAYVIMLQWIEELRLRLYSEFSTIPADITVVCGLGKHSSVRRVSPVKALVSE 892
            DLHGMHL S+Y+I+LQW++E RLR   E   IPA+I VV G GKHS+VR  SPVKALV +
Sbjct: 410  DLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPAEIVVVSGSGKHSNVRGESPVKALVKK 469

Query: 893  MMVRLQSPMKIQRNNVGCFVAKGRNVTKWL 982
            +MVR  SPM+I R NVG F+AKG+ V +WL
Sbjct: 470  IMVRTGSPMRIDRKNVGSFIAKGKTVKEWL 499


>ref|NP_565402.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|13877877|gb|AAK44016.1|AF370201_1 unknown protein
            [Arabidopsis thaliana] gi|21280879|gb|AAM44931.1| unknown
            protein [Arabidopsis thaliana]
            gi|330251481|gb|AEC06575.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  306 bits (783), Expect = 9e-81
 Identities = 162/330 (49%), Positives = 221/330 (66%), Gaps = 3/330 (0%)
 Frame = +2

Query: 2    KQGFDDEAEILIHGCIHRLESQE--IAMFYSDLIRAFSEYGCKESFVNYTSRLKRIIASC 175
            KQ   DE+E L+   + RL+S E    +F  +L+ + S+ G  + F   + RL+ II   
Sbjct: 177  KQERFDESETLLSTAVSRLKSNERDFTLFLCNLVESNSKQGSIQGFSEASFRLREIIQRS 236

Query: 176  SS-FNSRKAFEAMINGYSNLDLPREAEVVVEEMRDAGFRVEGFELRSILLAYGRLGLLSE 352
            SS +   +A+++M++G  N+D P +AE V+EEMR    +   FE +S+L  YGRLGL  +
Sbjct: 237  SSVYVKTQAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEYKSVLYGYGRLGLFDD 296

Query: 353  MKRVLDQMEKFGCKFDTICFNMVLSCYGAHGELSEMALWIEKMKRLNIPLSVRTYNSVLN 532
            M RV+ +M   G K DT+C NMVLS YGAH  L +M  W++K+K  N+P S+RTYNSVLN
Sbjct: 297  MNRVVHRMGTEGHKIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFSIRTYNSVLN 356

Query: 533  SCPAIISLIQHPKSMPLSIRELMENLQRSGKEEEALVIRGLMDSSVLVERLEWSCMEGKL 712
            SCP IIS+++   S P+S+ EL   L     E+EAL++  L  SSVL E +EW+ +EGKL
Sbjct: 357  SCPTIISMLKDLDSCPVSLSELRTFLN----EDEALLVHELTQSSVLDEAIEWNAVEGKL 412

Query: 713  DLHGMHLGSAYVIMLQWIEELRLRLYSEFSTIPADITVVCGLGKHSSVRRVSPVKALVSE 892
            DLHGMHL S+Y+I+LQW++E RLR   E   IPA+I VV G GKHS+VR  SPVKALV +
Sbjct: 413  DLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPAEIVVVSGSGKHSNVRGESPVKALVKK 472

Query: 893  MMVRLQSPMKIQRNNVGCFVAKGRNVTKWL 982
            +MVR  SPM+I R NVG F+AKG+ V +WL
Sbjct: 473  IMVRTGSPMRIDRKNVGSFIAKGKTVKEWL 502