BLASTX nr result

ID: Aconitum21_contig00003978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003978
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation fa...   404   e-110
ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus ...   392   e-107
ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa...   387   e-105
ref|XP_002324089.1| predicted protein [Populus trichocarpa] gi|2...   386   e-105
ref|XP_003554717.1| PREDICTED: probable ubiquitin conjugation fa...   378   e-102

>ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Cucumis
            sativus] gi|449494681|ref|XP_004159617.1| PREDICTED:
            probable ubiquitin conjugation factor E4-like [Cucumis
            sativus]
          Length = 1043

 Score =  404 bits (1039), Expect = e-110
 Identities = 207/294 (70%), Positives = 229/294 (77%), Gaps = 11/294 (3%)
 Frame = -1

Query: 849  FDSLEPIFNGLYEDLRGSVLKVSALGNFQDPLRALIILSTFPNGSKALVNHPWWIPKGAF 670
            FD+LEPI  GLYEDLRGSVLKVSALGNFQ PLRAL  L +FP G+K+LVNHPWWIP G +
Sbjct: 190  FDTLEPILKGLYEDLRGSVLKVSALGNFQQPLRALRFLVSFPVGAKSLVNHPWWIPTGKY 249

Query: 669  VNGRVIEMTSILGPFFHVSALPDQTIFKSEPDVGQQCFSEASTRRPADLLSSFATIKNVM 490
             NGRVIEMTSILGPFFHVSALPD  IFKS+PDVGQQCFSEASTRRPADLLSSF TIK VM
Sbjct: 250  SNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLSSFTTIKTVM 309

Query: 489  NQLYDGLGEVLLSLLKNTDTRESVLEYLAEVIKKNSSRSHIQVDPLTCASSGMFVNLSAV 310
            N LYDGL EVLLSLLKNT+TRE+VLEYLAEVI +NSSR+HIQVDPL+CASSGMFVNLSA+
Sbjct: 310  NNLYDGLSEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSAI 369

Query: 309  MIRLCEPFLDANLTKRSKIDPRYVFFNTRLDFRELTALHASVEEVTAWVD---------- 160
            M+RLCEPFLDANLTKR KIDP+YV ++ RL+ R LTALHAS EEVT W++          
Sbjct: 370  MLRLCEPFLDANLTKRDKIDPKYVCYSNRLELRGLTALHASSEEVTEWINNGTQLRTDNP 429

Query: 159  -KESPDFRRQSNVEXXXXXXXXXXXAPPMAKPMSPCGKTKYTFICECFFMTARV 1
             + S    R    +               AK  S   KT+Y FICECFFMTARV
Sbjct: 430  GQSSDSESRLLQSQEASSSGSNATIGSSTAKARSSSDKTRYPFICECFFMTARV 483


>ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527331|gb|EEF29477.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 1031

 Score =  392 bits (1007), Expect = e-107
 Identities = 203/290 (70%), Positives = 230/290 (79%), Gaps = 7/290 (2%)
 Frame = -1

Query: 849  FDSLEPIFNGLYEDLRGSVLKVSALGNFQDPLRALIILSTFPNGSKALVNHPWWIPKGAF 670
            FDSL+PI  GLYEDLRG+V+KVSA+GNFQ PL AL+ L T+P G K+LVNHPWWIPKGA+
Sbjct: 185  FDSLDPILKGLYEDLRGNVIKVSAMGNFQQPLGALLHLITYPVGVKSLVNHPWWIPKGAY 244

Query: 669  VNGRVIEMTSILGPFFHVSALPDQTIFKSEPDVGQQCFSEASTRRPADLLSSFATIKNVM 490
            +NGRVIEMTSILGPFFHVSALPD TIFKSEPDVGQQCFSE STRRP+DLLSSFATIK  M
Sbjct: 245  LNGRVIEMTSILGPFFHVSALPDHTIFKSEPDVGQQCFSEVSTRRPSDLLSSFATIKTFM 304

Query: 489  NQLYDGLGEVLLSLLKNTDTRESVLEYLAEVIKKNSSRSHIQVDPLTCASSGMFVNLSAV 310
            N LYDGL +VL  LLKN DTRE+VL+YLAEVI +NSSR+HIQVDPL+CASSGMFVNLSAV
Sbjct: 305  NNLYDGLEQVLRILLKNGDTRENVLQYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSAV 364

Query: 309  MIRLCEPFLDANLTKRSKIDPRYVFFNTRLDFRELTALHASVEEVTAWVDKESPDFRRQS 130
            M+RLC PFLD NLTKR KID +YVF + RLD R LTALHAS EEVT W++K +   + + 
Sbjct: 365  MLRLCNPFLDPNLTKRDKIDSQYVFESNRLDLRGLTALHASSEEVTEWMNKGNHG-KTEV 423

Query: 129  NVEXXXXXXXXXXXAPPMA------KPMSPCG-KTKYTFICECFFMTARV 1
            +V+               +      KP S  G K KYTFICECFFMTARV
Sbjct: 424  SVQSSDGENRLLQSQEATSSGSGTNKPTSSSGQKAKYTFICECFFMTARV 473


>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
            vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
            product [Vitis vinifera]
          Length = 1037

 Score =  387 bits (995), Expect = e-105
 Identities = 204/297 (68%), Positives = 229/297 (77%), Gaps = 14/297 (4%)
 Frame = -1

Query: 849  FDSLEPIFNGLYEDLRGSVLKVSALGNFQDPLRALIILSTFPNGSKALVNHPWWIPKGAF 670
            FDSL+PIF GLYE+LR  VLKVSALGNFQ PLRA + L  FP G+K+LV+H WWIP+GA+
Sbjct: 184  FDSLDPIFKGLYENLRSIVLKVSALGNFQQPLRAFLYLVRFPFGAKSLVSHRWWIPQGAY 243

Query: 669  VNGRVIEMTSILGPFFHVSALPDQTIFKSEPDVGQQCFSEASTRRPADLLSSFATIKNVM 490
            +NGRVIEMTSILGPFFHVSALPD+ IF+ +PDVGQQCFSEASTRRPADLLSSF TIK VM
Sbjct: 244  MNGRVIEMTSILGPFFHVSALPDRGIFQGQPDVGQQCFSEASTRRPADLLSSFTTIKTVM 303

Query: 489  NQLYDGLGEVLLSLLKNTDTRESVLEYLAEVIKKNSSRSHIQVDPLTCASSGMFVNLSAV 310
            N LYDGL EVLLSLLKN DTRESVL+YLAEVI KNSSR+HIQVDPL+CASSGMFV+LSAV
Sbjct: 304  NGLYDGLAEVLLSLLKNADTRESVLKYLAEVINKNSSRAHIQVDPLSCASSGMFVSLSAV 363

Query: 309  MIRLCEPFLDANLTKRSKIDPRYVFFNTRLDFRELTALHASVEEVTAWVDKESPDFRR-- 136
            M+RLCEPFLD  LTK  KIDP+YVF++TRLD R LTALHAS EEV  W++K+SP      
Sbjct: 364  MLRLCEPFLD--LTKMDKIDPKYVFYSTRLDLRGLTALHASSEEVAEWINKDSPGGTEGS 421

Query: 135  -----------QSNVEXXXXXXXXXXXAPPMAKPMSPCG-KTKYTFICECFFMTARV 1
                       QS                  AKP+     K KY+FICECFFMTARV
Sbjct: 422  RQYSDGESRLLQSQEATSSGSNAHGPSFLHNAKPVPISSEKAKYSFICECFFMTARV 478


>ref|XP_002324089.1| predicted protein [Populus trichocarpa] gi|222867091|gb|EEF04222.1|
            predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  386 bits (992), Expect = e-105
 Identities = 197/283 (69%), Positives = 225/283 (79%), Gaps = 1/283 (0%)
 Frame = -1

Query: 846  DSLEPIFNGLYEDLRGSVLKVSALGNFQDPLRALIILSTFPNGSKALVNHPWWIPKGAFV 667
            DSL+PIF GLYEDLRG+VLKVS LGNFQ PLRAL+ L +F  G+K+LV H WWIP GA+V
Sbjct: 184  DSLDPIFKGLYEDLRGNVLKVSVLGNFQQPLRALLFLVSFTVGAKSLVGHKWWIPTGAYV 243

Query: 666  NGRVIEMTSILGPFFHVSALPDQTIFKSEPDVGQQCFSEASTRRPADLLSSFATIKNVMN 487
            NGRVIEMTSILGPFFHVSALPD TIFKSEPDVGQQCFS+A+ RR ADLLSSF TIK +MN
Sbjct: 244  NGRVIEMTSILGPFFHVSALPDNTIFKSEPDVGQQCFSDATNRRQADLLSSFTTIKTLMN 303

Query: 486  QLYDGLGEVLLSLLKNTDTRESVLEYLAEVIKKNSSRSHIQVDPLTCASSGMFVNLSAVM 307
             LYDGL EVLL+LLKN+DTRESVL+YLAEVI +N++R+HIQVDPL+CASSGMFVNLSAVM
Sbjct: 304  HLYDGLSEVLLALLKNSDTRESVLQYLAEVINRNATRAHIQVDPLSCASSGMFVNLSAVM 363

Query: 306  IRLCEPFLDANLTKRSKIDPRYVFFNTRLDFRELTALHASVEEVTAWVDKESPDFRRQSN 127
            +RL EPFLDANL+K+ KIDP YVF N RLD R LTALHAS EE+T W++       R+++
Sbjct: 364  LRLSEPFLDANLSKKDKIDPNYVFQNNRLDIRGLTALHASSEEITEWLNTP-----RKTD 418

Query: 126  VEXXXXXXXXXXXAPPMAKPMSPCG-KTKYTFICECFFMTARV 1
            V                A      G K KY+FICECFFMTARV
Sbjct: 419  VSALSSDEENRLLQSQEASSSGNSGEKAKYSFICECFFMTARV 461


>ref|XP_003554717.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
            max]
          Length = 1036

 Score =  378 bits (970), Expect = e-102
 Identities = 193/293 (65%), Positives = 222/293 (75%), Gaps = 10/293 (3%)
 Frame = -1

Query: 849  FDSLEPIFNGLYEDLRGSVLKVSALGNFQDPLRALIILSTFPNGSKALVNHPWWIPKGAF 670
            FDSL+ I  GLYE+LRGSV+KVSALGNFQD LRAL+ L  FP G+K+LVNH WWIPKG +
Sbjct: 188  FDSLDKILKGLYEELRGSVMKVSALGNFQDSLRALLYLVRFPVGAKSLVNHEWWIPKGVY 247

Query: 669  VNGRVIEMTSILGPFFHVSALPDQTIFKSEPDVGQQCFSEASTRRPADLLSSFATIKNVM 490
            +NGR IEMTSILGPFFH+SALPD   FK +PDVGQQCFS+ASTRRPADLLSSF+TIK VM
Sbjct: 248  MNGRAIEMTSILGPFFHISALPDHAFFKGQPDVGQQCFSDASTRRPADLLSSFSTIKTVM 307

Query: 489  NQLYDGLGEVLLSLLKNTDTRESVLEYLAEVIKKNSSRSHIQVDPLTCASSGMFVNLSAV 310
            N LYDGL EVLL LLK+ DTRESVLEYLAE I  N+SR+HIQVDP+TCASSGMFVNLSAV
Sbjct: 308  NNLYDGLAEVLLILLKSQDTRESVLEYLAEAININASRAHIQVDPITCASSGMFVNLSAV 367

Query: 309  MIRLCEPFLDANLTKRSKIDPRYVFFNTRLDFRELTALHASVEEVTAWVDKESP------ 148
            M+RLCEPFLDANLTKR KID +YV  + RL    LTALHAS EEVT W++ ++P      
Sbjct: 368  MLRLCEPFLDANLTKRDKIDAKYVHCSNRLKLSGLTALHASSEEVTEWLNSKNPATTGAT 427

Query: 147  ----DFRRQSNVEXXXXXXXXXXXAPPMAKPMSPCGKTKYTFICECFFMTARV 1
                D +++                    +  +   KTKY+FICECFFMTARV
Sbjct: 428  NQYSDDQKRLQQSQEASSSGSNNFGELSNENSARAEKTKYSFICECFFMTARV 480


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