BLASTX nr result

ID: Aconitum21_contig00003848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003848
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloropl...   264   2e-68
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl...   263   3e-68
ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri...   262   6e-68
ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|2...   259   4e-67
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]      258   9e-67

>ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
           gi|297736206|emb|CBI24844.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  264 bits (674), Expect = 2e-68
 Identities = 153/254 (60%), Positives = 175/254 (68%), Gaps = 2/254 (0%)
 Frame = +2

Query: 77  MAAISSFLTSNVLSKPQPSFKTQQLPSKPSFHLPKPSTLRHCNGFSFSPLFLNPKQASKL 256
           MAAISS  +  +L  P    KT  L SKPS    KP      N  +F  +   PK+   +
Sbjct: 1   MAAISSLFSQTLLHHPT---KTLTLHSKPSIQPLKP--FHFLNSVTFKAI--KPKRPIAV 53

Query: 257 SXXXXXXXXXXXXXX-RRLYVGNIPRNVGNEELKKIFEEHGAVEKAEVMYDKYSKRSRRF 433
           S               RRLYVGNIPR + + EL +I EEHGAVEKAEVMYDKYS RSRRF
Sbjct: 54  SAVTAEAPVATSDVAARRLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRF 113

Query: 434 AFVTMKTEEDTNAAIEKMNGTEIGGRAIKVNVTEKPLTTVDTSLLQSEESQFVDSPHKVY 613
           AFVTMKT ED NAAIEK+NGTEIGGR IKVN+TEKPL T+D SLLQ+EESQF+DSPHKVY
Sbjct: 114 AFVTMKTVEDANAAIEKLNGTEIGGREIKVNITEKPLLTLDMSLLQAEESQFIDSPHKVY 173

Query: 614 VGNLAKTVTSDMLTKFFSEK-GKVLSAKISRVPXXXXXXXXXXXXXXXDEDVETAISSLN 790
           VGNLA+TVT+D LT+FFSEK GKVLSAK+SRVP               +EDVE AISS N
Sbjct: 174 VGNLARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAISSCN 233

Query: 791 NSLLEGQKIRVNKA 832
           N+ L+GQ+IRVNKA
Sbjct: 234 NAFLDGQRIRVNKA 247


>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
           max]
          Length = 246

 Score =  263 bits (673), Expect = 3e-68
 Identities = 151/250 (60%), Positives = 169/250 (67%), Gaps = 2/250 (0%)
 Frame = +2

Query: 89  SSFLTSNVLSKPQPSFKTQQL--PSKPSFHLPKPSTLRHCNGFSFSPLFLNPKQASKLSX 262
           S  LTSN LS   PS  +  +  P + S    +P  L   +GF   P     +QA+  + 
Sbjct: 7   SFLLTSNFLSLTTPSSSSTHVLFPMRLSTTHLRPLLLTTRHGFGRPPFAAVAEQAATATE 66

Query: 263 XXXXXXXXXXXXXRRLYVGNIPRNVGNEELKKIFEEHGAVEKAEVMYDKYSKRSRRFAFV 442
                        RRLYVGNIPR V NEEL KI +EHGAVEKAEVMYDKYS RSRRFAFV
Sbjct: 67  ASA----------RRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFV 116

Query: 443 TMKTEEDTNAAIEKMNGTEIGGRAIKVNVTEKPLTTVDTSLLQSEESQFVDSPHKVYVGN 622
           TMKT ED  A IEK+NGTEIGGR +KVNVTEKPL+T D  LLQ+EES+F+DSPHKVYVGN
Sbjct: 117 TMKTVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAEESEFIDSPHKVYVGN 176

Query: 623 LAKTVTSDMLTKFFSEKGKVLSAKISRVPXXXXXXXXXXXXXXXDEDVETAISSLNNSLL 802
           LAKTVT+D L  FFSEKGKVLSAK+SRVP               +EDVE AISS NNSLL
Sbjct: 177 LAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLL 236

Query: 803 EGQKIRVNKA 832
           EGQ IRVNKA
Sbjct: 237 EGQTIRVNKA 246


>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223547691|gb|EEF49184.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 256

 Score =  262 bits (670), Expect = 6e-68
 Identities = 152/259 (58%), Positives = 176/259 (67%), Gaps = 7/259 (2%)
 Frame = +2

Query: 77  MAAISSFLTSNVLSKPQPSFKTQQLPSKPSFHLPKPST-LRHCNGFSFSPLFLNPKQASK 253
           MA ISS   +++L           LP KP+F + KP+T   + + FS   + LNP+   +
Sbjct: 1   MATISSL--ASILPTSTKFTLFTNLP-KPTFLILKPTTHFINFSKFSHLDVVLNPRVPRR 57

Query: 254 L------SXXXXXXXXXXXXXXRRLYVGNIPRNVGNEELKKIFEEHGAVEKAEVMYDKYS 415
           L      +              +RLY+GNIPR V N+EL KI EEHGAVEKAEVMYDKYS
Sbjct: 58  LFAVAEEAAPVAPPPDPSSEAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYS 117

Query: 416 KRSRRFAFVTMKTEEDTNAAIEKMNGTEIGGRAIKVNVTEKPLTTVDTSLLQSEESQFVD 595
            RSRRFAFVTM+T ED NA IEK+NGT+IGGR IKVN+TEKPL + D S LQ EESQFVD
Sbjct: 118 GRSRRFAFVTMRTVEDANAVIEKLNGTQIGGREIKVNITEKPLASGDLSFLQLEESQFVD 177

Query: 596 SPHKVYVGNLAKTVTSDMLTKFFSEKGKVLSAKISRVPXXXXXXXXXXXXXXXDEDVETA 775
           SPHKVYVGNLAKTVTS++L  FFSEKGKVLSAK+SRVP               +EDVE A
Sbjct: 178 SPHKVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAA 237

Query: 776 ISSLNNSLLEGQKIRVNKA 832
           ISS NNSLLEGQKIRVNKA
Sbjct: 238 ISSFNNSLLEGQKIRVNKA 256


>ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|222850427|gb|EEE87974.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  259 bits (663), Expect = 4e-67
 Identities = 152/258 (58%), Positives = 168/258 (65%), Gaps = 6/258 (2%)
 Frame = +2

Query: 77  MAAISSFLTSNVLSKPQPSFKTQQLPSKPSFHLPKPST-LRHCNGFSFSPLFLNPKQASK 253
           MA ISS  T    S      + Q   SKPSF + KP+    H   F+     LN K   +
Sbjct: 1   MATISSLTTPLPTSTKLALSRNQ---SKPSFQILKPANPFNHFPKFTHLHKILNTKAPQR 57

Query: 254 L-----SXXXXXXXXXXXXXXRRLYVGNIPRNVGNEELKKIFEEHGAVEKAEVMYDKYSK 418
           L                    RRLYVGNIPR + NEEL KI EEHGAVEKAEVMYDKYS 
Sbjct: 58  LFAVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSG 117

Query: 419 RSRRFAFVTMKTEEDTNAAIEKMNGTEIGGRAIKVNVTEKPLTTVDTSLLQSEESQFVDS 598
           RSRRFAFVTMKT ED NAAIEK+NGTEIGGR IKVN+TEKPL ++D   LQS+ESQFVDS
Sbjct: 118 RSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDESQFVDS 177

Query: 599 PHKVYVGNLAKTVTSDMLTKFFSEKGKVLSAKISRVPXXXXXXXXXXXXXXXDEDVETAI 778
           P+KVYVGNLAKTV +D L  FFS+KG VLSAK+SRVP               +EDVE AI
Sbjct: 178 PYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAI 237

Query: 779 SSLNNSLLEGQKIRVNKA 832
           SS NNSLLEGQ IRVNKA
Sbjct: 238 SSFNNSLLEGQPIRVNKA 255


>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  258 bits (660), Expect = 9e-67
 Identities = 151/258 (58%), Positives = 168/258 (65%), Gaps = 6/258 (2%)
 Frame = +2

Query: 77  MAAISSFLTSNVLSKPQPSFKTQQLPSKPSFHLPKPST-LRHCNGFSFSPLFLNPKQASK 253
           MA ISS  T    S      + Q   SKPSF + KP+    H   F+     LN K   +
Sbjct: 1   MATISSLTTPLPTSTKLALSRNQ---SKPSFQILKPANPFNHFPKFTHLHKILNTKAPQR 57

Query: 254 L-----SXXXXXXXXXXXXXXRRLYVGNIPRNVGNEELKKIFEEHGAVEKAEVMYDKYSK 418
           L                    RRLYVGNIPR + NEEL KI EEHGAVEKAEVMYDKYS 
Sbjct: 58  LFAVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSG 117

Query: 419 RSRRFAFVTMKTEEDTNAAIEKMNGTEIGGRAIKVNVTEKPLTTVDTSLLQSEESQFVDS 598
           RSRRFAFVTMKT ED NAAIEK+NGTEIGGR IKVN+TEKPL ++D   LQS+E+QFVDS
Sbjct: 118 RSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDETQFVDS 177

Query: 599 PHKVYVGNLAKTVTSDMLTKFFSEKGKVLSAKISRVPXXXXXXXXXXXXXXXDEDVETAI 778
           P+KVYVGNLAKTV +D L  FFS+KG VLSAK+SRVP               +EDVE AI
Sbjct: 178 PYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAI 237

Query: 779 SSLNNSLLEGQKIRVNKA 832
           SS NNSLLEGQ IRVNKA
Sbjct: 238 SSFNNSLLEGQPIRVNKA 255


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