BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003803
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28783.3| unnamed protein product [Vitis vinifera]              474   e-131
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   474   e-131
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife...   449   e-124
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                447   e-123
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]       446   e-123

>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  474 bits (1219), Expect = e-131
 Identities = 234/266 (87%), Positives = 247/266 (92%)
 Frame = +3

Query: 3    GNEKDDDEADTVGCCTLKVENVTLVPDNKLQFDFLGKDSIRYFNTVEVEPLVYKAIGQFK 182
            GNEKDDDEADTVGCCTLKVENV LVP NKL+FDFLGKDSIRYFNTVEVE  VYKAIGQFK
Sbjct: 453  GNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFK 512

Query: 183  SGKTEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKSGDVAEKI 362
            +GK+ GDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLN+E + GD  EKI
Sbjct: 513  TGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKI 572

Query: 363  VVYQHANKEVAIICNHQRSVSKSHTAQMSKLSEKMDELKAILDELKTDLTRAKKGKPPLK 542
            V+YQHANKEVAIICNHQRSVSKSH  QMS+LSEKM EL+ +LDELKTDL RAKKGKPPLK
Sbjct: 573  VIYQHANKEVAIICNHQRSVSKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLK 632

Query: 543  DADGKPKKNLTPEALERKIAQTSGKLEKMERDMNTKESLKTVALGTSKINYLDPRISVAW 722
            D+DGKPKKN+TPE LERKIAQT+ K+EKMERDM TKE LKTVALGTSKINYLDPRISVAW
Sbjct: 633  DSDGKPKKNMTPEVLERKIAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAW 692

Query: 723  CKRHEVPIEKIFNKSLLAKFAWAMDV 800
            CKR EVPIEKIFNKSLLAKFAWAMDV
Sbjct: 693  CKRQEVPIEKIFNKSLLAKFAWAMDV 718


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  474 bits (1219), Expect = e-131
 Identities = 234/266 (87%), Positives = 247/266 (92%)
 Frame = +3

Query: 3    GNEKDDDEADTVGCCTLKVENVTLVPDNKLQFDFLGKDSIRYFNTVEVEPLVYKAIGQFK 182
            GNEKDDDEADTVGCCTLKVENV LVP NKL+FDFLGKDSIRYFNTVEVE  VYKAIGQFK
Sbjct: 612  GNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFK 671

Query: 183  SGKTEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKSGDVAEKI 362
            +GK+ GDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLN+E + GD  EKI
Sbjct: 672  TGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKI 731

Query: 363  VVYQHANKEVAIICNHQRSVSKSHTAQMSKLSEKMDELKAILDELKTDLTRAKKGKPPLK 542
            V+YQHANKEVAIICNHQRSVSKSH  QMS+LSEKM EL+ +LDELKTDL RAKKGKPPLK
Sbjct: 732  VIYQHANKEVAIICNHQRSVSKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLK 791

Query: 543  DADGKPKKNLTPEALERKIAQTSGKLEKMERDMNTKESLKTVALGTSKINYLDPRISVAW 722
            D+DGKPKKN+TPE LERKIAQT+ K+EKMERDM TKE LKTVALGTSKINYLDPRISVAW
Sbjct: 792  DSDGKPKKNMTPEVLERKIAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAW 851

Query: 723  CKRHEVPIEKIFNKSLLAKFAWAMDV 800
            CKR EVPIEKIFNKSLLAKFAWAMDV
Sbjct: 852  CKRQEVPIEKIFNKSLLAKFAWAMDV 877


>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
            gi|296082698|emb|CBI21703.3| unnamed protein product
            [Vitis vinifera]
          Length = 857

 Score =  449 bits (1156), Expect = e-124
 Identities = 224/266 (84%), Positives = 244/266 (91%)
 Frame = +3

Query: 3    GNEKDDDEADTVGCCTLKVENVTLVPDNKLQFDFLGKDSIRYFNTVEVEPLVYKAIGQFK 182
            GNEKDDDEADTVGCCTLKVENV   P N LQFDFLGKDSIRY  TVEVE  VYKAI QF+
Sbjct: 587  GNEKDDDEADTVGCCTLKVENVIPEPPNSLQFDFLGKDSIRYEKTVEVELPVYKAIEQFR 646

Query: 183  SGKTEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKSGDVAEKI 362
             GK+  DDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNK+TK GDVA+K+
Sbjct: 647  VGKSGSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKDTKEGDVAQKV 706

Query: 363  VVYQHANKEVAIICNHQRSVSKSHTAQMSKLSEKMDELKAILDELKTDLTRAKKGKPPLK 542
            VVYQHANKEVAIICNHQR++SKSHTAQM++L+EK+DE+K +L+ LKTDL RAKKGKPPLK
Sbjct: 707  VVYQHANKEVAIICNHQRTISKSHTAQMTRLTEKIDEMKGVLNGLKTDLARAKKGKPPLK 766

Query: 543  DADGKPKKNLTPEALERKIAQTSGKLEKMERDMNTKESLKTVALGTSKINYLDPRISVAW 722
            DADGK ++NLTPEALERKIAQT+ K+EKMERD +TKE LKTVALGTSKINYLDPRISVAW
Sbjct: 767  DADGK-RRNLTPEALERKIAQTNAKIEKMERDKDTKEDLKTVALGTSKINYLDPRISVAW 825

Query: 723  CKRHEVPIEKIFNKSLLAKFAWAMDV 800
            CKR EVPIEK+FNKSLLAKFAWAMDV
Sbjct: 826  CKRQEVPIEKVFNKSLLAKFAWAMDV 851


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score =  447 bits (1149), Expect = e-123
 Identities = 219/266 (82%), Positives = 243/266 (91%)
 Frame = +3

Query: 3    GNEKDDDEADTVGCCTLKVENVTLVPDNKLQFDFLGKDSIRYFNTVEVEPLVYKAIGQFK 182
            GNEKDDDEADTVGCCTLKVENV  VP N L+FDFLGKDSIRY N V+VEP V+KAI QF+
Sbjct: 656  GNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFR 715

Query: 183  SGKTEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKSGDVAEKI 362
            SGK   +DLFD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLD+ML+KETK G+VAEK+
Sbjct: 716  SGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKV 775

Query: 363  VVYQHANKEVAIICNHQRSVSKSHTAQMSKLSEKMDELKAILDELKTDLTRAKKGKPPLK 542
            VVYQHANKEVAIICNHQR+VSKSH+AQMS+L+EK+DELK  ++ELKTDL+R KKGKPP K
Sbjct: 776  VVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSK 835

Query: 543  DADGKPKKNLTPEALERKIAQTSGKLEKMERDMNTKESLKTVALGTSKINYLDPRISVAW 722
             ADGKPK+NL PEALERK+AQ + K+EKMERD  TKE LKTVALGTSKINYLDPRI+VAW
Sbjct: 836  GADGKPKRNLNPEALERKMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 895

Query: 723  CKRHEVPIEKIFNKSLLAKFAWAMDV 800
            CKRHEVPIEKIFNKSLLAKFAW+MDV
Sbjct: 896  CKRHEVPIEKIFNKSLLAKFAWSMDV 921


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score =  446 bits (1148), Expect = e-123
 Identities = 220/266 (82%), Positives = 242/266 (90%)
 Frame = +3

Query: 3    GNEKDDDEADTVGCCTLKVENVTLVPDNKLQFDFLGKDSIRYFNTVEVEPLVYKAIGQFK 182
            GNEKDDDEADTVGCCTLKVENV  VP N L+FDFLGKDSIRY N V+VEP V+KAI QF+
Sbjct: 654  GNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFR 713

Query: 183  SGKTEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKSGDVAEKI 362
            SGK   +DLFD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLD+ML+KETK G+VAE +
Sbjct: 714  SGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENV 773

Query: 363  VVYQHANKEVAIICNHQRSVSKSHTAQMSKLSEKMDELKAILDELKTDLTRAKKGKPPLK 542
            VVYQHANKEVAIICNHQR+VSKSH+AQMS+L+EK+DELK  L+ELKTDL+RAKKGKPP K
Sbjct: 774  VVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTK 833

Query: 543  DADGKPKKNLTPEALERKIAQTSGKLEKMERDMNTKESLKTVALGTSKINYLDPRISVAW 722
             ADGK K+NL PEALERKI QT+ K+EKMERD  TKE LKTVALGTSKINYLDPRI+VAW
Sbjct: 834  GADGKAKRNLNPEALERKITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 893

Query: 723  CKRHEVPIEKIFNKSLLAKFAWAMDV 800
            CKRHEVPIEKIFNKSLLAKFAW+MDV
Sbjct: 894  CKRHEVPIEKIFNKSLLAKFAWSMDV 919