BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003740
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold ...    61   2e-07
gb|ABN06159.1| Polynucleotidyl transferase, Ribonuclease H fold ...    57   5e-06
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    57   6e-06
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    57   6e-06

>gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 260

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 38/135 (28%), Positives = 64/135 (47%)
 Frame = -2

Query: 749 NDGRLPSFGWVARNSCGNPVAAVGNPNLYASTVIAAEGMALRDALSHAEHNRFVEVVFES 570
           N+  +  +G   R+S G+ +  + N      T   AE   L +A+  A       V+F+S
Sbjct: 120 NNNSIMGYGLCFRDSMGHFLPGMSNYEFLRVTPSEAEATGLLEAVKLAIARGMQSVIFKS 179

Query: 569 DCLSLVCFCNGTAGEHRDLGAMAGDIKLILRNNCNFKVKFCKRSANKLAHGMAAFASKFM 390
           DC  +V   N +   H +LG +    K +L  + NF V+F +R ANK+AH +A       
Sbjct: 180 DCKIVVDAVNSSVNPHNELGDIIFYCKQLLSLHANFSVRFVRRQANKVAHNIA------- 232

Query: 389 FKTSWNHFLPFVLYE 345
            + S +H  P + ++
Sbjct: 233 -RASLSHPSPHIFFD 246


>gb|ABN06159.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 266

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/109 (33%), Positives = 55/109 (50%)
 Frame = -2

Query: 737 LPSFGWVARNSCGNPVAAVGNPNLYASTVIAAEGMALRDALSHAEHNRFVEVVFESDCLS 558
           + SF    R+S G  + A         TV+  E +AL +A+  A+ NR+  VVFESD  +
Sbjct: 130 ITSFACCVRDSRGQFIRAQTKWQRANMTVLEGEAVALLEAIHSADANRWNRVVFESDSST 189

Query: 557 LVCFCNGTAGEHRDLGAMAGDIKLILRNNCNFKVKFCKRSANKLAHGMA 411
           LV   +       +  A+   I   L  + NF+VKF +R AN +AH +A
Sbjct: 190 LVQALSSPGHGDSEFSAIVSSIIYQLSLHSNFEVKFVRRQANMVAHTLA 238


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 38/132 (28%), Positives = 55/132 (41%)
 Frame = -2

Query: 725 GWVARNSCGNPVAAVGNPNLYASTVIAAEGMALRDALSHAEHNRFVEVVFESDCLSLVCF 546
           GW+ RN  G P++       + S  + AE  AL  AL       + +V  E DC +L+  
Sbjct: 352 GWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINL 411

Query: 545 CNGTAGEHRDLGAMAGDIKLILRNNCNFKVKFCKRSANKLAHGMAAFASKFMFKTSWNHF 366
            NG +  H  L     DI        + +  F +R  NKLAH +A +   +    S +  
Sbjct: 412 INGIS-FHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGCTYSTFYSGSGS 470

Query: 365 LPFVLYEQLCLD 330
           LP  L    C D
Sbjct: 471 LPIWLDRYFCND 482


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 38/132 (28%), Positives = 55/132 (41%)
 Frame = -2

Query: 725  GWVARNSCGNPVAAVGNPNLYASTVIAAEGMALRDALSHAEHNRFVEVVFESDCLSLVCF 546
            GW+ RN  G P++       + S  + AE  AL  AL       + +V  E DC +L+  
Sbjct: 1392 GWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINL 1451

Query: 545  CNGTAGEHRDLGAMAGDIKLILRNNCNFKVKFCKRSANKLAHGMAAFASKFMFKTSWNHF 366
             NG +  H  L     DI        + +  F +R  NKLAH +A +   +    S +  
Sbjct: 1452 INGIS-FHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGCTYSTFYSGSGS 1510

Query: 365  LPFVLYEQLCLD 330
            LP  L    C D
Sbjct: 1511 LPIWLDRYFCND 1522