BLASTX nr result

ID: Aconitum21_contig00003683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003683
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34828.3| unnamed protein product [Vitis vinifera]              298   1e-78
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   298   1e-78
ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata...   295   2e-77
emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      294   3e-77
ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ri...   290   4e-76

>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  298 bits (764), Expect = 1e-78
 Identities = 142/177 (80%), Positives = 163/177 (92%)
 Frame = -1

Query: 1194 AKLFVGNLPYDVTSEAMAQLFEQAGTVEVSEVIYNRDTDQSRGFGFVWMQTVEESLKAIE 1015
            AKLFVGNLPYD+ SE +AQLF++AG VE++EVIYNR+TDQSRGFGF+ M TVEE+ KA+E
Sbjct: 93   AKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVE 152

Query: 1014 MFNGYDLNGRYLTVNKAAPRGSRPERAPRTFEPSFRVYVGNLPWEVDDSRLEQVFSEHGK 835
            MFN YDLNGR+LTVNKAAPRGSRPER P+ FEPSFR+YVGNLPW+VDD+RLEQVFSEHGK
Sbjct: 153  MFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGK 212

Query: 834  VVQARVVYDRDTGRSRGFGFVSFSTQSEVNDAIEALDGQELEGRAIRVNVAEERPRR 664
            VV ARVVYDRDT RSRGFGFV+ S+++E+NDAI ALDGQ L+GRAIRVNVAEERPRR
Sbjct: 213  VVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRR 269


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
            vinifera]
          Length = 312

 Score =  298 bits (764), Expect = 1e-78
 Identities = 142/177 (80%), Positives = 163/177 (92%)
 Frame = -1

Query: 1194 AKLFVGNLPYDVTSEAMAQLFEQAGTVEVSEVIYNRDTDQSRGFGFVWMQTVEESLKAIE 1015
            AKLFVGNLPYD+ SE +AQLF++AG VE++EVIYNR+TDQSRGFGF+ M TVEE+ KA+E
Sbjct: 133  AKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVE 192

Query: 1014 MFNGYDLNGRYLTVNKAAPRGSRPERAPRTFEPSFRVYVGNLPWEVDDSRLEQVFSEHGK 835
            MFN YDLNGR+LTVNKAAPRGSRPER P+ FEPSFR+YVGNLPW+VDD+RLEQVFSEHGK
Sbjct: 193  MFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGK 252

Query: 834  VVQARVVYDRDTGRSRGFGFVSFSTQSEVNDAIEALDGQELEGRAIRVNVAEERPRR 664
            VV ARVVYDRDT RSRGFGFV+ S+++E+NDAI ALDGQ L+GRAIRVNVAEERPRR
Sbjct: 253  VVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRR 309


>ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
            gi|297313481|gb|EFH43904.1| RNA-binding protein cp31
            [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score =  295 bits (754), Expect = 2e-77
 Identities = 143/177 (80%), Positives = 161/177 (90%)
 Frame = -1

Query: 1194 AKLFVGNLPYDVTSEAMAQLFEQAGTVEVSEVIYNRDTDQSRGFGFVWMQTVEESLKAIE 1015
            AKLFVGNL YDV S+A+A LFEQAGTVE++EVIYNR+TDQSRGFGFV M TVEE+  A+E
Sbjct: 127  AKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVE 186

Query: 1014 MFNGYDLNGRYLTVNKAAPRGSRPERAPRTFEPSFRVYVGNLPWEVDDSRLEQVFSEHGK 835
             FN YDLNGR LTVNKAAPRGSRPERAPR +EP+FRVYVGNLPW+VD+ RLEQVFSEHGK
Sbjct: 187  KFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGK 246

Query: 834  VVQARVVYDRDTGRSRGFGFVSFSTQSEVNDAIEALDGQELEGRAIRVNVAEERPRR 664
            VV+ARVVYDR+TGRSRGFGFV+ S ++E+NDAI ALDGQ +EGRAIRVNVAEERPRR
Sbjct: 247  VVEARVVYDRETGRSRGFGFVTMSNENELNDAIAALDGQNMEGRAIRVNVAEERPRR 303


>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  294 bits (752), Expect = 3e-77
 Identities = 141/177 (79%), Positives = 164/177 (92%)
 Frame = -1

Query: 1194 AKLFVGNLPYDVTSEAMAQLFEQAGTVEVSEVIYNRDTDQSRGFGFVWMQTVEESLKAIE 1015
            AKLFVGNLPYDV  +A+A+LF+QAGTVEV+EVIYNR+TDQSRGFGFV M TVEE+ KA+E
Sbjct: 121  AKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVE 180

Query: 1014 MFNGYDLNGRYLTVNKAAPRGSRPERAPRTFEPSFRVYVGNLPWEVDDSRLEQVFSEHGK 835
            MFN YD+NGR LTVNKAAPRG+R +R PR FEP+FR+YVGNLPW+VDD+RLEQVFSEHGK
Sbjct: 181  MFNRYDINGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGK 240

Query: 834  VVQARVVYDRDTGRSRGFGFVSFSTQSEVNDAIEALDGQELEGRAIRVNVAEERPRR 664
            VV+ARVVYDR+TGRSRGFGFV+ STQ+E++DAI ALDGQ L+GRAIRVNVAE+RPRR
Sbjct: 241  VVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDGQSLDGRAIRVNVAEDRPRR 297


>ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
            gi|223550401|gb|EEF51888.1| ribonucleoprotein,
            chloroplast, putative [Ricinus communis]
          Length = 319

 Score =  290 bits (743), Expect = 4e-76
 Identities = 138/178 (77%), Positives = 162/178 (91%)
 Frame = -1

Query: 1194 AKLFVGNLPYDVTSEAMAQLFEQAGTVEVSEVIYNRDTDQSRGFGFVWMQTVEESLKAIE 1015
            AK+FVGNLPYDV S+ +A LFEQAGTVE++EVIYNR+TD SRGFGFV M TVEE+ KA+E
Sbjct: 141  AKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVE 200

Query: 1014 MFNGYDLNGRYLTVNKAAPRGSRPERAPRTFEPSFRVYVGNLPWEVDDSRLEQVFSEHGK 835
            MF+ +DL+GR LTVNKAAPRGSRPER PR FEP +R+YVGNLPW+VD++RLEQ+FSEHGK
Sbjct: 201  MFHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEHGK 260

Query: 834  VVQARVVYDRDTGRSRGFGFVSFSTQSEVNDAIEALDGQELEGRAIRVNVAEERPRRN 661
            VV ARVVYDRDTGRSRGFGFV+ ST++E+NDAI ALDG+ L+GRAIRVNVAE+RPRRN
Sbjct: 261  VVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGRSLDGRAIRVNVAEQRPRRN 318



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 42/97 (43%), Positives = 57/97 (58%)
 Frame = -1

Query: 954 GSRPERAPRTFEPSFRVYVGNLPWEVDDSRLEQVFSEHGKVVQARVVYDRDTGRSRGFGF 775
           GS PE A        +++VGNLP++VD  +L  +F + G V  A V+Y+R+T  SRGFGF
Sbjct: 127 GSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGF 186

Query: 774 VSFSTQSEVNDAIEALDGQELEGRAIRVNVAEERPRR 664
           VS ST  E   A+E     +L+GR + VN A  R  R
Sbjct: 187 VSMSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSR 223


Top