BLASTX nr result

ID: Aconitum21_contig00003618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003618
         (2398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp....    60   2e-06
ref|NP_179466.1| DNA excision repair protein E [Arabidopsis thal...    60   2e-06
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...    59   8e-06

>ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297332105|gb|EFH62524.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1181

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -3

Query: 2396 KKTEHVLFCSLTIEQRSMYRSFLASSEVEQI*D 2298
            KKTEHVLFCSLT+EQRS YR+FLASSEVEQI D
Sbjct: 653  KKTEHVLFCSLTVEQRSTYRAFLASSEVEQILD 685


>ref|NP_179466.1| DNA excision repair protein E [Arabidopsis thaliana]
            gi|4185142|gb|AAD08945.1| putative SNF2/RAD54 family DNA
            repair and recombination protein [Arabidopsis thaliana]
            gi|330251711|gb|AEC06805.1| DNA excision repair protein E
            [Arabidopsis thaliana]
          Length = 1187

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -3

Query: 2396 KKTEHVLFCSLTIEQRSMYRSFLASSEVEQI*D 2298
            KKTEHVLFCSLT+EQRS YR+FLASSEVEQI D
Sbjct: 655  KKTEHVLFCSLTVEQRSTYRAFLASSEVEQIFD 687


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
            communis] gi|223530676|gb|EEF32549.1| DNA repair and
            recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -3

Query: 2396 KKTEHVLFCSLTIEQRSMYRSFLASSEVEQI*D 2298
            KKTEHVLFCSLT EQRS+YR+FLAS+EVEQI D
Sbjct: 671  KKTEHVLFCSLTAEQRSVYRAFLASTEVEQIID 703


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