BLASTX nr result
ID: Aconitum21_contig00003391
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00003391
(1415 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera] 396 e-121
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258... 396 e-121
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi... 398 e-117
ref|XP_002525227.1| pentatricopeptide repeat-containing protein,... 391 e-114
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 392 e-112
>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 396 bits (1017), Expect(3) = e-121
Identities = 197/305 (64%), Positives = 234/305 (76%), Gaps = 2/305 (0%)
Frame = -3
Query: 1128 RLKEGRTVHEHFLKSKFKLD--LFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTAL 955
++++GR VH H + S F LD L N I+NMYAKCG LDDAR FD MP KDMVTWTAL
Sbjct: 102 KVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 954 ITGYSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGY 775
I G+SQN+RP +AL LFP M+ LG +PN FTLSSLLKASG+ G Q H FC+KYGY
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 774 EWNVYVGSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWK 595
+ +VYVGS+L+DMYAR G M+ A F+G+ K+EV WNALI+GHARK EGE AL + WK
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 594 MQREDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGS 415
MQR++++PTHFTYSSVF ACAS GALEQGKWVHAHMIKSG KLIAF+GNTL+DMYAKAGS
Sbjct: 281 MQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS 340
Query: 414 IKDAKKIFDRLEKKDVVSWNTILIDYAHHGRGKEAVKQFEDMPGLRF*PNEITFLCVLLL 235
I DAK++FDRL K DVVSWNT+L A HG GKE + +FE M + PNEI+FLCVL
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 234 ATMVG 220
+ G
Sbjct: 401 CSHSG 405
Score = 52.0 bits (123), Expect(3) = e-121
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = -1
Query: 1283 DSEIWE-EANNFCIIQEKDYLRKSHNSS-SGLHILDLIDQGALDPDPRIYNKLI 1128
DSE+ + +A +FC+ Q+KD LRKS + +GL+ LDLI +G+L PD +Y+KL+
Sbjct: 41 DSEVEDGDAXSFCVFQDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLL 94
Score = 38.1 bits (87), Expect(3) = e-121
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 241 TACNHGGLLDEEKYYFD--EEVGYVPDTRHVLLFVD 140
TAC+H GLLDE YYF+ ++ PD H + FVD
Sbjct: 399 TACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVD 434
Score = 135 bits (341), Expect = 2e-29
Identities = 77/261 (29%), Positives = 137/261 (52%), Gaps = 1/261 (0%)
Frame = -3
Query: 1125 LKEGRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALITG 946
L G +H LK ++ ++ +++++MYA+CG +D A+ FDGMP K V+W ALI+G
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264
Query: 945 YSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWN 766
+++ AL L M F+P FT SS+ A + + + G+ H IK G +
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLI 324
Query: 765 VYVGSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQR 586
++G++LLDMYA+ G +++A VF+ + + V WN ++ G A+ G++ L F +M R
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384
Query: 585 EDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGSIKD 406
+P ++ V AC+ +G L++G + M K + T VD+ + G +
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444
Query: 405 AKKIFDRLEKKDVVS-WNTIL 346
A++ + + + W +L
Sbjct: 445 AERFIREMPIEPTAAVWGALL 465
Score = 79.3 bits (194), Expect = 2e-12
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Frame = -3
Query: 633 KSEGEDALKVFWKMQREDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKS---GGKLI 463
+S+G L +QR P + YS + C G +EQG+ VHAH++ S L+
Sbjct: 65 QSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV 124
Query: 462 AFVGNTLVDMYAKAGSIKDAKKIFDRLEKKDVVSWNTILIDYAHHGRGKEAVKQFEDMPG 283
+ N +V+MYAK G + DA+++FD + KD+V+W ++ ++ + R ++A+ F M
Sbjct: 125 --LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 282 LRF*PNEITFLCVL 241
L PN T +L
Sbjct: 183 LGLQPNHFTLSSLL 196
Score = 61.6 bits (148), Expect = 5e-07
Identities = 39/78 (50%), Positives = 46/78 (58%), Gaps = 15/78 (19%)
Frame = -2
Query: 190 EEVGYVPDTRHVLLFVDQ-------QYHSEKLALGFARLNTSPG-*LSLNIHVRVQGD-- 41
+E+GYVPDT HVLLFVDQ QYHSEKLAL FA LNT G + + ++RV GD
Sbjct: 566 KEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCH 625
Query: 40 -----GTKSNFSDGCCSC 2
+K GC SC
Sbjct: 626 AAIKFVSKIYEFSGCSSC 643
>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 396 bits (1017), Expect(3) = e-121
Identities = 197/305 (64%), Positives = 234/305 (76%), Gaps = 2/305 (0%)
Frame = -3
Query: 1128 RLKEGRTVHEHFLKSKFKLD--LFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTAL 955
++++GR VH H + S F LD L N I+NMYAKCG LDDAR FD MP KDMVTWTAL
Sbjct: 102 KVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 954 ITGYSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGY 775
I G+SQN+RP +AL LFP M+ LGF+PN FTLSSLLKASG+ G Q H FC+KYGY
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 774 EWNVYVGSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWK 595
+ +VYVGS+L+DMYAR G M+ A F+G+ K+EV WNALI+GHARK EGE AL + WK
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 594 MQREDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGS 415
MQR++++PTHFTYSSV ACAS GALEQGKWVHAHMIKSG KLIAF+GNTL+DMYAKAGS
Sbjct: 281 MQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS 340
Query: 414 IKDAKKIFDRLEKKDVVSWNTILIDYAHHGRGKEAVKQFEDMPGLRF*PNEITFLCVLLL 235
I DAK++FDRL K DVVSWNT+L A HG GKE + +FE M + PNEI+FLCVL
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 234 ATMVG 220
+ G
Sbjct: 401 CSHSG 405
Score = 51.6 bits (122), Expect(3) = e-121
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = -1
Query: 1283 DSEIWE-EANNFCIIQEKDYLRKSHNSS-SGLHILDLIDQGALDPDPRIYNKLI 1128
DSE+ + +A +FC+ Q+KD LRKS + +GL+ LDLI +G+L PD +Y+KL+
Sbjct: 41 DSEVEDGDAASFCVFQDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLL 94
Score = 38.1 bits (87), Expect(3) = e-121
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -2
Query: 241 TACNHGGLLDEEKYYFD--EEVGYVPDTRHVLLFVD 140
TAC+H GLLDE YYF+ ++ PD H + FVD
Sbjct: 399 TACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVD 434
Score = 137 bits (345), Expect = 7e-30
Identities = 78/261 (29%), Positives = 138/261 (52%), Gaps = 1/261 (0%)
Frame = -3
Query: 1125 LKEGRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALITG 946
L G +H LK ++ ++ +++++MYA+CG +D A+ FDGMP K V+W ALI+G
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264
Query: 945 YSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWN 766
+++ AL L M F+P FT SS+L A + + + G+ H IK G +
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324
Query: 765 VYVGSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQR 586
++G++LLDMYA+ G +++A VF+ + + V WN ++ G A+ G++ L F +M R
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384
Query: 585 EDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGSIKD 406
+P ++ V AC+ +G L++G + M K + T VD+ + G +
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444
Query: 405 AKKIFDRLEKKDVVS-WNTIL 346
A++ + + + W +L
Sbjct: 445 AERFIREMPIEPTAAVWGALL 465
Score = 81.6 bits (200), Expect = 4e-13
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Frame = -3
Query: 633 KSEGEDALKVFWKMQREDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKS---GGKLI 463
+S+G L +QR P + YS + C G +EQG+ VHAH++ S L+
Sbjct: 65 QSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV 124
Query: 462 AFVGNTLVDMYAKAGSIKDAKKIFDRLEKKDVVSWNTILIDYAHHGRGKEAVKQFEDMPG 283
+ N +V+MYAK G + DA+++FD + KD+V+W ++ ++ + R ++A+ F M
Sbjct: 125 --LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 282 LRF*PNEITFLCVL 241
L F PN T +L
Sbjct: 183 LGFQPNHFTLSSLL 196
Score = 60.5 bits (145), Expect = 1e-06
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 8/58 (13%)
Frame = -2
Query: 190 EEVGYVPDTRHVLLFVDQ-------QYHSEKLALGFARLNTSPG-*LSLNIHVRVQGD 41
+E+GYVPDT HVLLFVDQ QYHSEKLAL FA LNT G + + ++RV GD
Sbjct: 566 KEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGD 623
>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 398 bits (1022), Expect(3) = e-117
Identities = 192/303 (63%), Positives = 237/303 (78%)
Frame = -3
Query: 1128 RLKEGRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALIT 949
+LK+GR +H H S F+ DL LN I+NMYAKCGSL++A+ FD MP KDMV+WT LI+
Sbjct: 120 KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 179
Query: 948 GYSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEW 769
GYSQ+ + EALALFP M+ LGF+PN+FTLSSLLKASG PSD GRQ H F +KYGY+
Sbjct: 180 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 239
Query: 768 NVYVGSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQ 589
NV+VGSSLLDMYAR+ M EA +FN + KN V WNALIAGHARK EGE +++F +M
Sbjct: 240 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQML 299
Query: 588 REDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGSIK 409
R+ ++PTHFTYSSVF ACAS+G+LEQGKWVHAH+IKSGG+ IA++GNTL+DMYAK+GSIK
Sbjct: 300 RQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 359
Query: 408 DAKKIFDRLEKKDVVSWNTILIDYAHHGRGKEAVKQFEDMPGLRF*PNEITFLCVLLLAT 229
DAKK+F RL K+D+VSWN+I+ YA HG G EA++ FE M + PNEITFL VL +
Sbjct: 360 DAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACS 419
Query: 228 MVG 220
G
Sbjct: 420 HSG 422
Score = 42.0 bits (97), Expect(3) = e-117
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 9/66 (13%)
Frame = -1
Query: 1298 EAYVTDSEIWEE--ANNFCIIQEKDYLRKSHNSSSG-------LHILDLIDQGALDPDPR 1146
E+ +S+ W+ A ++Q++D LR +H SSSG L++LDLI+ G+L+P+
Sbjct: 47 ESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERT 106
Query: 1145 IYNKLI 1128
+Y+K++
Sbjct: 107 LYSKML 112
Score = 32.7 bits (73), Expect(3) = e-117
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2
Query: 241 TACNHGGLLDEEKYYFD 191
TAC+H GLLDE +YYF+
Sbjct: 416 TACSHSGLLDEGQYYFE 432
Score = 152 bits (384), Expect = 2e-34
Identities = 81/260 (31%), Positives = 151/260 (58%), Gaps = 3/260 (1%)
Frame = -3
Query: 1116 GRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALITGYSQ 937
GR +H LK + +++ +S+++MYA+ + +A+ F+ + K++V+W ALI G+++
Sbjct: 225 GRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR 284
Query: 936 NDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWNVYV 757
+ LF M+ GF+P FT SS+ A ++ S + G+ H IK G + Y+
Sbjct: 285 KGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYI 344
Query: 756 GSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQREDY 577
G++L+DMYA+ G +++A VF + ++ V WN++I+G+A+ G +AL++F +M +
Sbjct: 345 GNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKV 404
Query: 576 KPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGN--TLVDMYAKAGSIKDA 403
+P T+ SV AC+ +G L++G++ M K K+ A V + T+VD+ +AG + +A
Sbjct: 405 QPNEITFLSVLTACSHSGLLDEGQYYFELMKKH--KIEAQVAHHVTVVDLLGRAGRLNEA 462
Query: 402 KKIFDRLEKKDVVS-WNTIL 346
K + + K + W +L
Sbjct: 463 NKFIEEMPIKPTAAVWGALL 482
Score = 120 bits (300), Expect = 1e-24
Identities = 67/220 (30%), Positives = 115/220 (52%)
Frame = -3
Query: 879 KPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWNVYVGSSLLDMYARYGKMEEAWS 700
+P + S +L K GR H +E ++ + + +L+MYA+ G +EEA
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 699 VFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQREDYKPTHFTYSSVFGACASTGA 520
+F+ + K+ V W LI+G+++ + +AL +F KM ++P FT SS+ A + +
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 519 LEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGSIKDAKKIFDRLEKKDVVSWNTILID 340
G+ +HA +K G + VG++L+DMYA+ +++AK IF+ L K+VVSWN ++
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281
Query: 339 YAHHGRGKEAVKQFEDMPGLRF*PNEITFLCVLLLATMVG 220
+A G G+ ++ F M F P T+ V G
Sbjct: 282 HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSG 321
Score = 92.0 bits (227), Expect = 3e-16
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 4/223 (1%)
Frame = -3
Query: 1125 LKEGRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALITG 946
L++G+ VH H +KS + + N++I+MYAK GS+ DA+ F + +D+V+W ++I+G
Sbjct: 323 LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 382
Query: 945 YSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWN 766
Y+Q+ EAL LF M+ +PN+ T S+L A + G+ + K+ E
Sbjct: 383 YAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ 442
Query: 765 VYVGSSLLDMYARYGKMEEAWSVFNGVKNK-NEVCWNALIAG---HARKSEGEDALKVFW 598
V +++D+ R G++ EA + K W AL+ H G A + +
Sbjct: 443 VAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIF 502
Query: 597 KMQREDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGK 469
++ D P H S+++ AS G L V M +SG K
Sbjct: 503 ELDPHDSGP-HVLLSNIY---ASAGRLSDAAKVRKMMKESGVK 541
>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 420
Score = 391 bits (1005), Expect(3) = e-114
Identities = 193/304 (63%), Positives = 233/304 (76%)
Frame = -3
Query: 1131 DRLKEGRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALI 952
++LKEG+ VH H L S+FK DL N+I+NMYAKCG+L +AR FD MP+KD+VTWTALI
Sbjct: 95 NKLKEGQLVHAHLLNSRFKHDLVIQNTILNMYAKCGNLGEARKVFDQMPVKDVVTWTALI 154
Query: 951 TGYSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYE 772
TGYSQ+DRP +AL LFP M+TLGF+PN FTLSSLLKASG +PSD GR H FCIKYGY
Sbjct: 155 TGYSQHDRPKDALLLFPQMLTLGFRPNHFTLSSLLKASGVSPSDSNGRLLHAFCIKYGYS 214
Query: 771 WNVYVGSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKM 592
NVYVGS+LLDMYAR G +EEA +F+G+ ++NEV WNALIAG ARK + E A F KM
Sbjct: 215 CNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNALIAGCARKGDQELAFSFFSKM 274
Query: 591 QREDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGSI 412
RE+ +PT FTYS V ACAS G+LEQGKWVHA +IKSG KL+ FVGNTL+ MYAK+GSI
Sbjct: 275 LRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGAKLVDFVGNTLLGMYAKSGSI 334
Query: 411 KDAKKIFDRLEKKDVVSWNTILIDYAHHGRGKEAVKQFEDMPGLRF*PNEITFLCVLLLA 232
+DA+K+FD L K+DVVSWN++L YA HG G A+ F M + PN+ITFLCVL
Sbjct: 335 EDARKVFDGLVKRDVVSWNSMLAGYAQHGLGNIALLIFRQMLIIGVAPNDITFLCVLTAC 394
Query: 231 TMVG 220
+ G
Sbjct: 395 SHAG 398
Score = 44.3 bits (103), Expect(3) = e-114
Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -1
Query: 1247 IIQEKDYLRKS-HNSSSGLHILDLIDQGALDPDPRIYNKL 1131
II+EKD LR S S +GLH+LDLID+ +L+PD +Y+ L
Sbjct: 48 IIEEKDLLRHSLDQSGTGLHVLDLIDRASLEPDRTLYHIL 87
Score = 26.2 bits (56), Expect(3) = e-114
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 241 TACNHGGLLDEEKYYFD 191
TAC+H GLL E +YF+
Sbjct: 392 TACSHAGLLAEGLHYFN 408
Score = 130 bits (328), Expect = 6e-28
Identities = 68/203 (33%), Positives = 116/203 (57%)
Frame = -3
Query: 1116 GRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALITGYSQ 937
GR +H +K + +++ +++++MYA+ G L++A FDG+P ++ V+W ALI G ++
Sbjct: 201 GRLLHAFCIKYGYSCNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNALIAGCAR 260
Query: 936 NDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWNVYV 757
A + F M+ +P QFT S +L A + S + G+ H IK G + +V
Sbjct: 261 KGDQELAFSFFSKMLRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGAKLVDFV 320
Query: 756 GSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQREDY 577
G++LL MYA+ G +E+A VF+G+ ++ V WN+++AG+A+ G AL +F +M
Sbjct: 321 GNTLLGMYAKSGSIEDARKVFDGLVKRDVVSWNSMLAGYAQHGLGNIALLIFRQMLIIGV 380
Query: 576 KPTHFTYSSVFGACASTGALEQG 508
P T+ V AC+ G L +G
Sbjct: 381 APNDITFLCVLTACSHAGLLAEG 403
Score = 88.2 bits (217), Expect = 5e-15
Identities = 44/124 (35%), Positives = 70/124 (56%)
Frame = -3
Query: 612 LKVFWKMQREDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGNTLVDM 433
L V + R +P Y +F C L++G+ VHAH++ S K + NT+++M
Sbjct: 66 LHVLDLIDRASLEPDRTLYHILFKKCTLFNKLKEGQLVHAHLLNSRFKHDLVIQNTILNM 125
Query: 432 YAKAGSIKDAKKIFDRLEKKDVVSWNTILIDYAHHGRGKEAVKQFEDMPGLRF*PNEITF 253
YAK G++ +A+K+FD++ KDVV+W ++ Y+ H R K+A+ F M L F PN T
Sbjct: 126 YAKCGNLGEARKVFDQMPVKDVVTWTALITGYSQHDRPKDALLLFPQMLTLGFRPNHFTL 185
Query: 252 LCVL 241
+L
Sbjct: 186 SSLL 189
Score = 81.6 bits (200), Expect = 4e-13
Identities = 43/118 (36%), Positives = 67/118 (56%)
Frame = -3
Query: 1125 LKEGRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALITG 946
L++G+ VH +KS KL F N+++ MYAK GS++DAR FDG+ +D+V+W +++ G
Sbjct: 299 LEQGKWVHALLIKSGAKLVDFVGNTLLGMYAKSGSIEDARKVFDGLVKRDVVSWNSMLAG 358
Query: 945 YSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYE 772
Y+Q+ + AL +F M+ +G PN T +L A A G + KY E
Sbjct: 359 YAQHGLGNIALLIFRQMLIIGVAPNDITFLCVLTACSHAGLLAEGLHYFNLMRKYKEE 416
>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 392 bits (1007), Expect(2) = e-112
Identities = 191/303 (63%), Positives = 236/303 (77%)
Frame = -3
Query: 1128 RLKEGRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALIT 949
+LK+GR +H H S F+ DL LN I+NMYAKCGSL++A+ FD MP KDMV+WT LI+
Sbjct: 120 KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 179
Query: 948 GYSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEW 769
GYSQ+ + EALALFP M+ LGF+PN+FTLSSLLKASG PSD GRQ H F +KYGY+
Sbjct: 180 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 239
Query: 768 NVYVGSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQ 589
NV+VGSSLLDMYAR+ M EA +FN + KN V WNALIAGHARK EGE +++F +M
Sbjct: 240 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQML 299
Query: 588 REDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGSIK 409
R+ ++PTHFTYSSV ACAS+G+LEQGKWVHAH+IKSGG+ IA++GNTL+DMYAK+GSIK
Sbjct: 300 RQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 358
Query: 408 DAKKIFDRLEKKDVVSWNTILIDYAHHGRGKEAVKQFEDMPGLRF*PNEITFLCVLLLAT 229
DAKK+F RL K+D+VSWN+I+ YA HG G EA++ FE M + PNEITFL VL +
Sbjct: 359 DAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACS 418
Query: 228 MVG 220
G
Sbjct: 419 HSG 421
Score = 42.0 bits (97), Expect(2) = e-112
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 9/66 (13%)
Frame = -1
Query: 1298 EAYVTDSEIWEE--ANNFCIIQEKDYLRKSHNSSSG-------LHILDLIDQGALDPDPR 1146
E+ +S+ W+ A ++Q++D LR +H SSSG L++LDLI+ G+L+P+
Sbjct: 47 ESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERT 106
Query: 1145 IYNKLI 1128
+Y+K++
Sbjct: 107 LYSKML 112
Score = 150 bits (379), Expect = 8e-34
Identities = 80/260 (30%), Positives = 151/260 (58%), Gaps = 3/260 (1%)
Frame = -3
Query: 1116 GRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALITGYSQ 937
GR +H LK + +++ +S+++MYA+ + +A+ F+ + K++V+W ALI G+++
Sbjct: 225 GRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR 284
Query: 936 NDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWNVYV 757
+ LF M+ GF+P FT SS+L + + ++ G+ H IK G + Y+
Sbjct: 285 KGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQ-GKWVHAHVIKSGGQPIAYI 343
Query: 756 GSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQREDY 577
G++L+DMYA+ G +++A VF + ++ V WN++I+G+A+ G +AL++F +M +
Sbjct: 344 GNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKV 403
Query: 576 KPTHFTYSSVFGACASTGALEQGKWVHAHMIKSGGKLIAFVGN--TLVDMYAKAGSIKDA 403
+P T+ SV AC+ +G L++G++ M K K+ A V + T+VD+ +AG + +A
Sbjct: 404 QPNEITFLSVLTACSHSGLLDEGQYYFELMKKH--KIEAQVAHHVTVVDLLGRAGRLNEA 461
Query: 402 KKIFDRLEKKDVVS-WNTIL 346
K + + K + W +L
Sbjct: 462 NKFIEEMPIKPTAAVWGALL 481
Score = 123 bits (308), Expect = 1e-25
Identities = 68/217 (31%), Positives = 117/217 (53%)
Frame = -3
Query: 879 KPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWNVYVGSSLLDMYARYGKMEEAWS 700
+P + S +L K GR H +E ++ + + +L+MYA+ G +EEA
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 699 VFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQREDYKPTHFTYSSVFGACASTGA 520
+F+ + K+ V W LI+G+++ + +AL +F KM ++P FT SS+ A + +
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 519 LEQGKWVHAHMIKSGGKLIAFVGNTLVDMYAKAGSIKDAKKIFDRLEKKDVVSWNTILID 340
G+ +HA +K G + VG++L+DMYA+ +++AK IF+ L K+VVSWN ++
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281
Query: 339 YAHHGRGKEAVKQFEDMPGLRF*PNEITFLCVLLLAT 229
+A G G+ ++ F M F P T+ VL A+
Sbjct: 282 HARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACAS 318
Score = 93.2 bits (230), Expect = 1e-16
Identities = 90/379 (23%), Positives = 166/379 (43%), Gaps = 17/379 (4%)
Frame = -3
Query: 1125 LKEGRTVHEHFLKSKFKLDLFTLNSIINMYAKCGSLDDARTFFDGMPIKDMVTWTALITG 946
L++G+ VH H +KS + + N++I+MYAK GS+ DA+ F + +D+V+W ++I+G
Sbjct: 322 LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 381
Query: 945 YSQNDRPHEALALFPHMITLGFKPNQFTLSSLLKASGAAPSDKIGRQFHGFCIKYGYEWN 766
Y+Q+ EAL LF M+ +PN+ T S+L A + G+ + K+ E
Sbjct: 382 YAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ 441
Query: 765 VYVGSSLLDMYARYGKMEEAWSVFNGVKNKNEVCWNALIAGHARKSEGEDALKVFWKMQR 586
V +++D+ R G++ EA NK ++
Sbjct: 442 VAHHVTVVDLLGRAGRLNEA--------NK--------------------------FIEE 467
Query: 585 EDYKPTHFTYSSVFGACASTGALEQGKWVHAHMIK-----SGGKLIAFVGNTLVDMYAKA 421
KPT + ++ GAC ++ G + + + SG ++ L ++YA A
Sbjct: 468 MPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVL------LSNIYASA 521
Query: 420 GSIKDAKKIFDRL-----EKKDVVSW----NTILIDYAH---HGRGKEAVKQFEDMPGLR 277
G + DA K+ + +K+ SW N + + A+ H +E + +E + G
Sbjct: 522 GRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISG-- 579
Query: 276 F*PNEITFLCVLLLATMVGFWTRRSTILTRKLDMFQTHDMCFCLWISSTTVKSLL*ALRV 97
+I + + + V F+ + R+L + + + T L ++
Sbjct: 580 ----KIKEIGYVPDTSHVLFFMNQQ---DRELKLQYHSEKLALAFAVLKTPPGLTIRIKK 632
Query: 96 STHLLGDCHSTFMFVSKVM 40
+ + GDCHS F F S+V+
Sbjct: 633 NIRICGDCHSAFKFASRVL 651