BLASTX nr result

ID: Aconitum21_contig00003313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003313
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605577.1| 40S ribosomal protein S20-2 [Medicago trunca...   150   8e-35
ref|NP_201036.1| 40S ribosomal protein S20-1 [Arabidopsis thalia...   150   1e-34
ref|XP_002877555.1| 40S ribosomal protein S20 [Arabidopsis lyrat...   150   1e-34
ref|XP_002866483.1| 40S ribosomal protein S20 [Arabidopsis lyrat...   150   1e-34
ref|XP_002866482.1| 40S ribosomal protein S20 [Arabidopsis lyrat...   150   1e-34

>ref|XP_003605577.1| 40S ribosomal protein S20-2 [Medicago truncatula]
           gi|355506632|gb|AES87774.1| 40S ribosomal protein S20-2
           [Medicago truncatula] gi|388508260|gb|AFK42196.1|
           unknown [Medicago truncatula]
          Length = 122

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/82 (91%), Positives = 77/82 (93%)
 Frame = +1

Query: 1   SDLVRGAKEKSLRVKGPVRMPTKTLKITTRKTPCGEGTNTWDRFELRVHKRVIDLVSSSE 180
           SDLVRGAK+K LRVKGPVRMPTK L ITTRKTPCGEGTNTWDRFELRVHKRVIDL SS +
Sbjct: 40  SDLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGEGTNTWDRFELRVHKRVIDLYSSPD 99

Query: 181 VVKQITSITIEPGVEVEVTIAD 246
           VVKQITSITIEPGVEVEVTIAD
Sbjct: 100 VVKQITSITIEPGVEVEVTIAD 121


>ref|NP_201036.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|22331606|ref|NP_190089.2| 40S ribosomal protein S20-1
           [Arabidopsis thaliana] gi|145334871|ref|NP_001078781.1|
           40S ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|21542443|sp|P49200.2|RS201_ARATH RecName: Full=40S
           ribosomal protein S20-1
           gi|11762182|gb|AAG40369.1|AF325017_1 AT5g62300
           [Arabidopsis thaliana]
           gi|13877519|gb|AAK43837.1|AF370460_1 40S ribosomal
           protein S20 [Arabidopsis thaliana]
           gi|20465624|gb|AAM20143.1| putative 40S ribsomomal
           protein [Arabidopsis thaliana]
           gi|21281054|gb|AAM45072.1| putative 40S ribsomomal
           protein [Arabidopsis thaliana]
           gi|21553799|gb|AAM62892.1| ribosomal protein S20-like
           protein [Arabidopsis thaliana]
           gi|332010210|gb|AED97593.1| 40S ribosomal protein S20-1
           [Arabidopsis thaliana] gi|332010211|gb|AED97594.1| 40S
           ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|332644460|gb|AEE77981.1| 40S ribosomal protein S20-1
           [Arabidopsis thaliana]
          Length = 124

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = +1

Query: 1   SDLVRGAKEKSLRVKGPVRMPTKTLKITTRKTPCGEGTNTWDRFELRVHKRVIDLVSSSE 180
           +DLVRGAK+K LRVKGPVRMPTK LKITTRK PCGEGTNTWDRFELRVHKRVIDL SS +
Sbjct: 42  TDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPD 101

Query: 181 VVKQITSITIEPGVEVEVTIAD 246
           VVKQITSITIEPGVEVEVTIAD
Sbjct: 102 VVKQITSITIEPGVEVEVTIAD 123


>ref|XP_002877555.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]
           gi|297323393|gb|EFH53814.1| 40S ribosomal protein S20
           [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = +1

Query: 1   SDLVRGAKEKSLRVKGPVRMPTKTLKITTRKTPCGEGTNTWDRFELRVHKRVIDLVSSSE 180
           +DLVRGAK+K LRVKGPVRMPTK LKITTRK PCGEGTNTWDRFELRVHKRVIDL SS +
Sbjct: 40  TDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPD 99

Query: 181 VVKQITSITIEPGVEVEVTIAD 246
           VVKQITSITIEPGVEVEVTIAD
Sbjct: 100 VVKQITSITIEPGVEVEVTIAD 121


>ref|XP_002866483.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]
           gi|297312318|gb|EFH42742.1| 40S ribosomal protein S20
           [Arabidopsis lyrata subsp. lyrata]
          Length = 124

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = +1

Query: 1   SDLVRGAKEKSLRVKGPVRMPTKTLKITTRKTPCGEGTNTWDRFELRVHKRVIDLVSSSE 180
           +DLVRGAK+K LRVKGPVRMPTK LKITTRK PCGEGTNTWDRFELRVHKRVIDL SS +
Sbjct: 42  TDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPD 101

Query: 181 VVKQITSITIEPGVEVEVTIAD 246
           VVKQITSITIEPGVEVEVTIAD
Sbjct: 102 VVKQITSITIEPGVEVEVTIAD 123


>ref|XP_002866482.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]
           gi|297312317|gb|EFH42741.1| 40S ribosomal protein S20
           [Arabidopsis lyrata subsp. lyrata]
          Length = 123

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = +1

Query: 1   SDLVRGAKEKSLRVKGPVRMPTKTLKITTRKTPCGEGTNTWDRFELRVHKRVIDLVSSSE 180
           +DLVRGAK+K LRVKGPVRMPTK LKITTRK PCGEGTNTWDRFELRVHKRVIDL SS +
Sbjct: 41  TDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWDRFELRVHKRVIDLFSSPD 100

Query: 181 VVKQITSITIEPGVEVEVTIAD 246
           VVKQITSITIEPGVEVEVTIAD
Sbjct: 101 VVKQITSITIEPGVEVEVTIAD 122


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