BLASTX nr result

ID: Aconitum21_contig00003265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003265
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   119   3e-25
ref|XP_002863964.1| hypothetical protein ARALYDRAFT_331329 [Arab...   101   6e-20
ref|XP_002863946.1| predicted protein [Arabidopsis lyrata subsp....   100   2e-19
ref|NP_001119399.1| GINS complex subunit 4 [Arabidopsis thaliana...   100   2e-19
ref|NP_199712.2| GINS complex subunit 4 [Arabidopsis thaliana] g...   100   2e-19

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/84 (73%), Positives = 71/84 (84%)
 Frame = -1

Query: 254 MASGSEGGLGFDSGDGDVDPSIAMTSDVELLKRAWRNEKASPEILQFQSSLVQRSREQIQ 75
           MASGSE G GF + D +   S+  T+DVELLKRAWRNEKA+PEIL FQ++LVQRSREQIQ
Sbjct: 1   MASGSEEGSGFPADDYE---SLIATTDVELLKRAWRNEKAAPEILHFQTALVQRSREQIQ 57

Query: 74  LMEDTVEEYEGNGTDPLTVSLYQM 3
           LME+TVEE+  NGTDPLTVSLYQM
Sbjct: 58  LMEETVEEFGENGTDPLTVSLYQM 81


>ref|XP_002863964.1| hypothetical protein ARALYDRAFT_331329 [Arabidopsis lyrata subsp.
           lyrata] gi|297309799|gb|EFH40223.1| hypothetical protein
           ARALYDRAFT_331329 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/84 (61%), Positives = 66/84 (78%)
 Frame = -1

Query: 254 MASGSEGGLGFDSGDGDVDPSIAMTSDVELLKRAWRNEKASPEILQFQSSLVQRSREQIQ 75
           MAS SE G     G  D + ++  TSDVELLKRAWRNEKA+PEILQ++ +LVQR++EQI+
Sbjct: 1   MASNSEAG-----GSADYE-TLMSTSDVELLKRAWRNEKAAPEILQYEGALVQRAKEQIE 54

Query: 74  LMEDTVEEYEGNGTDPLTVSLYQM 3
           L+E+T+E+Y  NG DPL VSLYQM
Sbjct: 55  LVEETIEDYVENGIDPLVVSLYQM 78


>ref|XP_002863946.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309781|gb|EFH40205.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -1

Query: 254 MASGSEGGLGFDSGDGDVDPSIAMTSDVELLKRAWRNEKASPEILQFQSSLVQRSREQIQ 75
           MAS SE G     G  D + ++  TSDVELLKRAWRNEKA+PEILQ++ +LV R++EQI+
Sbjct: 1   MASNSEAG-----GSADYE-TLMSTSDVELLKRAWRNEKAAPEILQYEGALVDRAKEQIE 54

Query: 74  LMEDTVEEYEGNGTDPLTVSLYQM 3
           L+E+T+E+Y  NG DPL VSLYQM
Sbjct: 55  LVEETIEDYVENGIDPLVVSLYQM 78


>ref|NP_001119399.1| GINS complex subunit 4 [Arabidopsis thaliana]
           gi|332008374|gb|AED95757.1| GINS complex subunit 4
           [Arabidopsis thaliana]
          Length = 191

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -1

Query: 254 MASGSEGGLGFDSGDGDVDPSIAMTSDVELLKRAWRNEKASPEILQFQSSLVQRSREQIQ 75
           MAS SE G     G  D + ++  TSDVELLKRAWRNEKA+PEILQ++ +LV R++EQI+
Sbjct: 1   MASNSEAG-----GSADYE-TLMSTSDVELLKRAWRNEKAAPEILQYEGALVDRAKEQIE 54

Query: 74  LMEDTVEEYEGNGTDPLTVSLYQM 3
           L+E+T+E+Y  NG DPL VSLYQM
Sbjct: 55  LVEETIEDYVENGIDPLVVSLYQM 78


>ref|NP_199712.2| GINS complex subunit 4 [Arabidopsis thaliana]
           gi|34146798|gb|AAQ62407.1| At5g49010 [Arabidopsis
           thaliana] gi|62319442|dbj|BAD94796.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332008373|gb|AED95756.1| GINS complex subunit 4
           [Arabidopsis thaliana]
          Length = 220

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -1

Query: 254 MASGSEGGLGFDSGDGDVDPSIAMTSDVELLKRAWRNEKASPEILQFQSSLVQRSREQIQ 75
           MAS SE G     G  D + ++  TSDVELLKRAWRNEKA+PEILQ++ +LV R++EQI+
Sbjct: 1   MASNSEAG-----GSADYE-TLMSTSDVELLKRAWRNEKAAPEILQYEGALVDRAKEQIE 54

Query: 74  LMEDTVEEYEGNGTDPLTVSLYQM 3
           L+E+T+E+Y  NG DPL VSLYQM
Sbjct: 55  LVEETIEDYVENGIDPLVVSLYQM 78


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