BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003223
         (3050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloropla...   635   e-179
gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. m...   635   e-179
ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   634   e-179
ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloropla...   633   e-179
sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease...   632   e-178

>ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
            sativus] gi|449505877|ref|XP_004162592.1| PREDICTED:
            chaperone protein ClpC, chloroplastic-like [Cucumis
            sativus]
          Length = 924

 Score =  635 bits (1639), Expect = e-179
 Identities = 328/379 (86%), Positives = 340/379 (89%)
 Frame = +1

Query: 1027 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQC 1206
            KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL               LKPALARGELQC
Sbjct: 345  KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQC 404

Query: 1207 IGATTLDEYRKHIEKDPALERRFQXXXXXXXXXXXXXQILKGLRERYEIHHKLRYTDEAL 1386
            IGATTLDEYRKHIEKDPALERRFQ             QILKGLRERYEIHHKLRYTDEAL
Sbjct: 405  IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 464

Query: 1387 EAAAHLSYQYISDRFLPDKAIDLIDEAGSRVRLREAQLPEEARELEKELRGITKEKNEAA 1566
            EAAA LSYQYISDRFLPDKAIDLIDEAGSRVRLR AQLPEEA+E+EKELR ITKEKN+A 
Sbjct: 465  EAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKEVEKELRQITKEKNDAV 524

Query: 1567 RGQDFEKAGELRDREMDLRAKITNLVEKGKERNKAESEAGDSGPVVTEVDIQHIVSAWTG 1746
            R QDFEKAGELRDREM+L+AKI+ L++KGKE +KAESEAGD GPVVTEVDIQHIVS+WTG
Sbjct: 525  RSQDFEKAGELRDREMELKAKISALIDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTG 584

Query: 1747 IPVDKVSTDESARLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 1926
            IPV+KVSTDES RLLKMEETLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG
Sbjct: 585  IPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 644

Query: 1927 PTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 2106
            PTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA
Sbjct: 645  PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 704

Query: 2107 VRRRPYTVVLFDEIEKAHP 2163
            VRRRPYTVVLFDEIEKAHP
Sbjct: 705  VRRRPYTVVLFDEIEKAHP 723



 Score =  382 bits (982), Expect = e-103
 Identities = 213/301 (70%), Positives = 224/301 (74%), Gaps = 1/301 (0%)
 Frame = +3

Query: 3   RTVKMICNFQASRLRSQTPSLVLRGFSGLRGSNALDTIAMPSLDFHSKVAASLNRPRG-R 179
           R VKM+ +  +       P + +R FSGLRG N+LD +  P  DFHSKVA +++  RG R
Sbjct: 31  RVVKMMSSVHS-------PGMRMRSFSGLRGLNSLDNMFRPGQDFHSKVAIAISSRRGGR 83

Query: 180 GSRCVAKAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSM 359
            SR V +AMFERFTEKAIKVIMLAQEEARRLGHNFV                AAKVLKSM
Sbjct: 84  PSRGVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSM 143

Query: 360 GINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXX 539
           GINLKDARVEVEKIIGRG GFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS       
Sbjct: 144 GINLKDARVEVEKIIGRGGGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGL 203

Query: 540 XXXXXXVAARVLENLGADPNNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNL 719
                 VAARVLENLGADP NIRTQVIRM                  NKMPTLEEYGTNL
Sbjct: 204 LREGEGVAARVLENLGADPANIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNL 263

Query: 720 TKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDV 899
           TKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDV
Sbjct: 264 TKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDV 323

Query: 900 P 902
           P
Sbjct: 324 P 324



 Score =  124 bits (312), Expect = 1e-25
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = +3

Query: 2292 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 2471
            GFDLDYDEKDSSY RIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 772  GFDLDYDEKDSSYTRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 831

Query: 2472 VFVRL 2486
            VF RL
Sbjct: 832  VFDRL 836


>gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. melo]
          Length = 929

 Score =  635 bits (1637), Expect = e-179
 Identities = 329/379 (86%), Positives = 338/379 (89%)
 Frame = +1

Query: 1027 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQC 1206
            KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL               LKPALARGELQC
Sbjct: 351  KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQC 410

Query: 1207 IGATTLDEYRKHIEKDPALERRFQXXXXXXXXXXXXXQILKGLRERYEIHHKLRYTDEAL 1386
            IGATTLDEYRKHIEKDPALERRFQ             QILKGLRERYEIHHKLRYTDEAL
Sbjct: 411  IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 470

Query: 1387 EAAAHLSYQYISDRFLPDKAIDLIDEAGSRVRLREAQLPEEARELEKELRGITKEKNEAA 1566
             AAA LSYQYISDRFLPDKAIDL+DEAGSRVRLR AQLPEEARELEKELR ITKEKNEA 
Sbjct: 471  VAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 530

Query: 1567 RGQDFEKAGELRDREMDLRAKITNLVEKGKERNKAESEAGDSGPVVTEVDIQHIVSAWTG 1746
            R QDFEKAGELRDREM+L+ KI+ LV+KGKE +KAESEAGD GPVVTEVDIQHIVS+WTG
Sbjct: 531  RSQDFEKAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTG 590

Query: 1747 IPVDKVSTDESARLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 1926
            IPV+KVSTDES RLLKMEETLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG
Sbjct: 591  IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 650

Query: 1927 PTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 2106
            PTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA
Sbjct: 651  PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 710

Query: 2107 VRRRPYTVVLFDEIEKAHP 2163
            VRRRPYTVVLFDEIEKAHP
Sbjct: 711  VRRRPYTVVLFDEIEKAHP 729



 Score =  368 bits (945), Expect = 5e-99
 Identities = 207/306 (67%), Positives = 220/306 (71%), Gaps = 6/306 (1%)
 Frame = +3

Query: 3   RTVKMICNFQASRLRSQTPSLVLRGFSGLRGSNALDTIAMPSLDFHSKVAASLNRPRGRG 182
           R VKM+         + +P L +R FSGLRG N+LD +     DFHSK+A +++  R + 
Sbjct: 32  RAVKMMAT-------AHSPGLRIRNFSGLRGFNSLDNMLRSGQDFHSKMAITISSRRRKA 84

Query: 183 SRCVAKAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMG 362
           SRCV +AMFERFTEKAIKVIMLAQEEARRLGHNFV                AAKVLKSMG
Sbjct: 85  SRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMG 144

Query: 363 INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXX 542
           INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS        
Sbjct: 145 INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLL 204

Query: 543 XXXXXVAARVLENLGA------DPNNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEE 704
                VAARVLENLG          N+  QVIRM                  NKMPTLEE
Sbjct: 205 REGEGVAARVLENLGKLFIFNLMFYNLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEE 264

Query: 705 YGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 884
           YGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI
Sbjct: 265 YGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 324

Query: 885 ANGDVP 902
           ANGDVP
Sbjct: 325 ANGDVP 330



 Score =  127 bits (318), Expect = 2e-26
 Identities = 64/65 (98%), Positives = 64/65 (98%)
 Frame = +3

Query: 2292 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 2471
            GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 778  GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 837

Query: 2472 VFVRL 2486
            VF RL
Sbjct: 838  VFDRL 842


>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4A, chloroplastic-like [Vitis vinifera]
          Length = 923

 Score =  634 bits (1636), Expect = e-179
 Identities = 328/379 (86%), Positives = 338/379 (89%)
 Frame = +1

Query: 1027 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQC 1206
            KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL               LKPALARGELQC
Sbjct: 344  KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQC 403

Query: 1207 IGATTLDEYRKHIEKDPALERRFQXXXXXXXXXXXXXQILKGLRERYEIHHKLRYTDEAL 1386
            IGATTLDEYRKHIEKDPALERRFQ             QILKGLRERYEIHHKLRYTDEAL
Sbjct: 404  IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 463

Query: 1387 EAAAHLSYQYISDRFLPDKAIDLIDEAGSRVRLREAQLPEEARELEKELRGITKEKNEAA 1566
             +AA LSYQYISDRFLPDKAIDLIDEAGSRVRLR AQLPEEARELEKELR ITKEKNEA 
Sbjct: 464  VSAARLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 523

Query: 1567 RGQDFEKAGELRDREMDLRAKITNLVEKGKERNKAESEAGDSGPVVTEVDIQHIVSAWTG 1746
            R QDFEKAGELRDREMDL+A+I+ L++KGKE  KAE+EAGD GP+VTEVDIQHIVSAWTG
Sbjct: 524  RSQDFEKAGELRDREMDLKAQISTLIDKGKEMTKAETEAGDIGPMVTEVDIQHIVSAWTG 583

Query: 1747 IPVDKVSTDESARLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 1926
            IPV+KVSTDES RLLKMEETLH RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG
Sbjct: 584  IPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 643

Query: 1927 PTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 2106
            PTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA
Sbjct: 644  PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 703

Query: 2107 VRRRPYTVVLFDEIEKAHP 2163
            VRRRPYTVVLFDEIEKAHP
Sbjct: 704  VRRRPYTVVLFDEIEKAHP 722



 Score =  407 bits (1045), Expect = e-110
 Identities = 220/300 (73%), Positives = 233/300 (77%)
 Frame = +3

Query: 3   RTVKMICNFQASRLRSQTPSLVLRGFSGLRGSNALDTIAMPSLDFHSKVAASLNRPRGRG 182
           ++VKM+CN QA       P L +RGFSGLRG+NALD +     DFHS+VAA+++   G+ 
Sbjct: 31  KSVKMMCNVQA-------PGLRIRGFSGLRGANALDNLVRSGHDFHSRVAAAISVRGGKA 83

Query: 183 SRCVAKAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMG 362
           SRCVA+AMFERFTEKAIKVIMLAQEEARRLGHNFV                AAKVLKSMG
Sbjct: 84  SRCVARAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMG 143

Query: 363 INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXX 542
           INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS        
Sbjct: 144 INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLL 203

Query: 543 XXXXXVAARVLENLGADPNNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNLT 722
                VAARVLENLGADP+NIRTQVIRM                  NKMPTLEEYGTNLT
Sbjct: 204 REGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGTTGNKMPTLEEYGTNLT 263

Query: 723 KLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVP 902
           KLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVP
Sbjct: 264 KLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVP 323



 Score =  126 bits (316), Expect = 4e-26
 Identities = 63/65 (96%), Positives = 64/65 (98%)
 Frame = +3

Query: 2292 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 2471
            GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVK+IADIMLKE
Sbjct: 771  GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKDIADIMLKE 830

Query: 2472 VFVRL 2486
            VF RL
Sbjct: 831  VFERL 835


>ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
            sativus]
          Length = 929

 Score =  633 bits (1633), Expect = e-179
 Identities = 328/379 (86%), Positives = 338/379 (89%)
 Frame = +1

Query: 1027 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQC 1206
            KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL               LKPALARGELQC
Sbjct: 351  KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQC 410

Query: 1207 IGATTLDEYRKHIEKDPALERRFQXXXXXXXXXXXXXQILKGLRERYEIHHKLRYTDEAL 1386
            IGATTLDEYRKHIEKDPALERRFQ             QILKGLRERYEIHHKLRYTDEAL
Sbjct: 411  IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEAL 470

Query: 1387 EAAAHLSYQYISDRFLPDKAIDLIDEAGSRVRLREAQLPEEARELEKELRGITKEKNEAA 1566
             AAA LSYQYISDRFLPDKAIDL+DEAGSRVRLR AQLPEEARELEKELR ITKEKNEA 
Sbjct: 471  VAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 530

Query: 1567 RGQDFEKAGELRDREMDLRAKITNLVEKGKERNKAESEAGDSGPVVTEVDIQHIVSAWTG 1746
            R QDFEKAGELRDREM+L+ KI+ LV+KGKE +KAESEAGD GPVVTEVDIQHIVS+WTG
Sbjct: 531  RSQDFEKAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTG 590

Query: 1747 IPVDKVSTDESARLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSG 1926
            IPV+KVSTDES RLLKMEETLH RVIGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSG
Sbjct: 591  IPVEKVSTDESDRLLKMEETLHKRVIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSG 650

Query: 1927 PTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 2106
            PTGVGKSELAK LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA
Sbjct: 651  PTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEA 710

Query: 2107 VRRRPYTVVLFDEIEKAHP 2163
            VRRRPYTVVLFDEIEKAHP
Sbjct: 711  VRRRPYTVVLFDEIEKAHP 729



 Score =  365 bits (936), Expect = 5e-98
 Identities = 206/306 (67%), Positives = 219/306 (71%), Gaps = 6/306 (1%)
 Frame = +3

Query: 3   RTVKMICNFQASRLRSQTPSLVLRGFSGLRGSNALDTIAMPSLDFHSKVAASLNRPRGRG 182
           R VKM+         + +P L +R FSGLRG N+LD +     +FHSKVA +++  R + 
Sbjct: 32  RAVKMMST-------AHSPGLRIRNFSGLRGFNSLDNMLRSRQNFHSKVATAISSRRRKA 84

Query: 183 SRCVAKAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMG 362
           SRCV +AMFERFTEKAIKVIMLAQEEARRLGHNFV                AAKVLKSMG
Sbjct: 85  SRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMG 144

Query: 363 INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXXX 542
           INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS        
Sbjct: 145 INLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLL 204

Query: 543 XXXXXVAARVLENLGA------DPNNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEE 704
                VAARVLENLG           +  QVIRM                  NKMPTLEE
Sbjct: 205 REGEGVAARVLENLGKLFIFNLMFYKLSKQVIRMVGESTEAVGAGVGGGSSGNKMPTLEE 264

Query: 705 YGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 884
           YGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI
Sbjct: 265 YGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 324

Query: 885 ANGDVP 902
           ANGDVP
Sbjct: 325 ANGDVP 330



 Score =  127 bits (318), Expect = 2e-26
 Identities = 64/65 (98%), Positives = 64/65 (98%)
 Frame = +3

Query: 2292 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 2471
            GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE
Sbjct: 778  GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 837

Query: 2472 VFVRL 2486
            VF RL
Sbjct: 838  VFDRL 842


>sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4A, chloroplastic; Flags: Precursor
            gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A)
            [Solanum lycopersicum]
          Length = 926

 Score =  632 bits (1631), Expect = e-178
 Identities = 327/380 (86%), Positives = 342/380 (90%), Gaps = 1/380 (0%)
 Frame = +1

Query: 1027 KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXXLKPALARGELQC 1206
            KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL               LKPALARGELQC
Sbjct: 346  KYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQC 405

Query: 1207 IGATTLDEYRKHIEKDPALERRFQXXXXXXXXXXXXXQILKGLRERYEIHHKLRYTDEAL 1386
            IGATTLDEYRKHIEKDPALERRFQ             QILKGLRERYEIHHKL YTDEA+
Sbjct: 406  IGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAI 465

Query: 1387 EAAAHLSYQYISDRFLPDKAIDLIDEAGSRVRLREAQLPEEARELEKELRGITKEKNEAA 1566
            EAAA LS+QYISDRFLPDKAIDLIDEAGSRVRLR AQLPEEARELEKELR ITKEKNEA 
Sbjct: 466  EAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAV 525

Query: 1567 RGQDFEKAGELRDREMDLRAKITNLVEKGKERNKAESEAGD-SGPVVTEVDIQHIVSAWT 1743
            RGQDFEKAGELRDREMDL+A+I+ L++K KE++KAESEAGD +GP+VTE DIQHIVS+WT
Sbjct: 526  RGQDFEKAGELRDREMDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWT 585

Query: 1744 GIPVDKVSTDESARLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 1923
            GIPV+KVSTDES RLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS
Sbjct: 586  GIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFS 645

Query: 1924 GPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 2103
            GPTGVGKSELAK+LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE
Sbjct: 646  GPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTE 705

Query: 2104 AVRRRPYTVVLFDEIEKAHP 2163
            AVRRRPYTVVLFDEIEKAHP
Sbjct: 706  AVRRRPYTVVLFDEIEKAHP 725



 Score =  380 bits (977), Expect = e-103
 Identities = 214/301 (71%), Positives = 223/301 (74%), Gaps = 1/301 (0%)
 Frame = +3

Query: 3   RTVKMICNFQASRLRSQTPSLVLRGFSGLRGSNALDTIAMPSLD-FHSKVAASLNRPRGR 179
           RTV+M+CN +    R       L  F+GLRG NALDT+ + S +  HSKVAA+    R R
Sbjct: 32  RTVRMLCNVKCCSSR-------LNNFAGLRGCNALDTLLVKSGETLHSKVAAATFVRRPR 84

Query: 180 GSRCVAKAMFERFTEKAIKVIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSM 359
           G R V KAMFERFTEKAIKVIMLAQEEARRLGHNFV                AAKVLKSM
Sbjct: 85  GCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSM 144

Query: 360 GINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXXX 539
           GINLKDARVEVEKIIGRGSGF+AVEIPFTPRAKRVLELSLEEARQLGHNYIGS       
Sbjct: 145 GINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGL 204

Query: 540 XXXXXXVAARVLENLGADPNNIRTQVIRMXXXXXXXXXXXXXXXXXXNKMPTLEEYGTNL 719
                 VAARVLENLGADP NIRTQVIRM                   KMPTLEEYGTNL
Sbjct: 205 LREGEGVAARVLENLGADPTNIRTQVIRMVGESSEAVGASVGGGTSGLKMPTLEEYGTNL 264

Query: 720 TKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDV 899
           TKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDV
Sbjct: 265 TKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDV 324

Query: 900 P 902
           P
Sbjct: 325 P 325



 Score =  125 bits (315), Expect = 5e-26
 Identities = 63/65 (96%), Positives = 64/65 (98%)
 Frame = +3

Query: 2292 GFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKE 2471
            GFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQLTKLEVKEIADIMLKE
Sbjct: 774  GFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKE 833

Query: 2472 VFVRL 2486
            VFVRL
Sbjct: 834  VFVRL 838