BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00003137
         (1792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34375.3| unnamed protein product [Vitis vinifera]              480   e-133
ref|XP_002299515.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...   255   3e-65
ref|XP_003610363.1| Pentatricopeptide repeat-containing protein ...   254   5e-65
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr...   253   1e-64

>emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  480 bits (1235), Expect = e-133
 Identities = 238/413 (57%), Positives = 308/413 (74%)
 Frame = -2

Query: 1767 GSKADGIKMFTEISEPDVVSWAARVGASYDGEEALELFKFLCSKNIEVNEYTIINILSAF 1588
            GSK+D IKMF E++EPDVVSW  R+GA+YD  EA ELF+ + S N+EVNEY +IN+LSA 
Sbjct: 268  GSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAM 327

Query: 1587 GDFRLLKSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCVSWN 1408
             + +LLKSG++IQ  C K GY+ V SV+NALI MYG+C  +  AR +FDEM+  D VSWN
Sbjct: 328  REPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWN 387

Query: 1407 ALLAVYAENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKS 1228
            +L+A YAENGL+   LK+FS+MR   L  NK+TLASIL+V ANS  PE   +IH++I+K 
Sbjct: 388  SLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKL 447

Query: 1227 GFISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFF 1048
            GFI DDSML+CLI AYGKC+ I  +  ++S+I QI+V+H+NA+ ATLVHAG + DAL  F
Sbjct: 448  GFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLF 507

Query: 1047 RDTWNFRXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISEDNFVGTALLDVYCKC 868
            +  W              LKACGALT LE GR +H++ALK G+S+DNFV +A++DVYCKC
Sbjct: 508  QTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKC 567

Query: 867  GSLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGFL 688
            G++D+    F  + ++N  AWNAM+MGYAQHGC  EVFELFN+M+ LGI  DEIT LG L
Sbjct: 568  GTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVL 627

Query: 687  YLCCHSGLVNEACSFLNFMVDRHGVIPRLEHYACVVDLLGRVGKLEDAKNVIN 529
              CCH+GLVNEA ++L+ M++ HGV+P LEHYAC++DL GRVG LEDAK  I+
Sbjct: 628  NSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTID 680



 Score =  112 bits (280), Expect = 3e-22
 Identities = 102/408 (25%), Positives = 179/408 (43%), Gaps = 7/408 (1%)
 Frame = -2

Query: 1746 KMFTEISEPDVVSWAARV-GASYDGE--EALELFKFL--CSKNIEVNEYTIINILSAFGD 1582
            K F E    D V W A V G  ++GE  +  E+F  +      +E+NE+++ ++L A  D
Sbjct: 173  KCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSD 232

Query: 1581 FRLLKSGKKIQAYCYKTGYISVISV--SNALISMYGRCQCIEEARTVFDEMVHRDCVSWN 1408
             R    G+++     K G +   S+  +NAL++MY RC    +A  +FDEM   D VSW 
Sbjct: 233  VR---EGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWT 289

Query: 1407 ALLAVYAENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKS 1228
              +   A    I+   +LF  +    +  N++ L ++L  +   K  +  ++I     K+
Sbjct: 290  ERIG--AAYDAIE-AFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKA 346

Query: 1227 GFISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFF 1048
            G++   S+   LI  YGKC E+     +F E+   D V  N+++A     G  + AL  F
Sbjct: 347  GYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVF 406

Query: 1047 RDTWNFRXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISEDNFVGTALLDVYCKC 868
                ++            L+        EQ   +H+  +K G   D+ + + L+  Y KC
Sbjct: 407  SQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKC 466

Query: 867  GSLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGFL 688
              + + +  +  + + N    NAM       GC  +  +LF     L   VD IT L  +
Sbjct: 467  NMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCIT-LSIV 525

Query: 687  YLCCHSGLVNEACSFLNFMVDRHGVIPRLEHYACVVDLLGRVGKLEDA 544
               C +    E    ++ M  + G+       + V+D+  + G +++A
Sbjct: 526  LKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEA 573



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 2/285 (0%)
 Frame = -2

Query: 1536 KTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCVSWNALLAVYAENGLIDLTLK 1357
            K+G+     +S+ +++ +        AR    +  + D VSWN+L++ YA          
Sbjct: 48   KSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFD 107

Query: 1356 LFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKSGFISDDSMLTCLIRAYG 1177
            LF+ +R S L  ++F+L+S+   +      E  +  H   LK G + +  +++ L+  Y 
Sbjct: 108  LFNGLRRSGLSPDEFSLSSL---VKGCGVLEQNEVAHGVCLKMGLL-NGFVVSGLLDGYA 163

Query: 1176 KCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFFRDTWNFRXXXXXXXXXX 997
            K  +++     F E Y  D V   A++   V  G +E     F +               
Sbjct: 164  KLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGL-GLGLELNEFS 222

Query: 996  XLKACGALTALEQGRIMHALALKCGI--SEDNFVGTALLDVYCKCGSLDDGRMAFDKLPE 823
                 GAL+ + +G  +  L++K G+       +  AL+++Y +CGS  D    FD++ E
Sbjct: 223  LTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTE 282

Query: 822  DNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGFL 688
             +  +W   + G A      E FELF  ++   + V+E   +  L
Sbjct: 283  PDVVSWTERI-GAAYDAI--EAFELFRLVLSGNMEVNEYMLINVL 324



 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 44/186 (23%), Positives = 78/186 (41%)
 Frame = -2

Query: 1269 PELTKEIHAHILKSGFISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILAT 1090
            P LT + +A  LKSGF  D  + + ++  +    +         +    D V  N++++ 
Sbjct: 36   PPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISG 95

Query: 1089 LVHAGYYEDALNFFRDTWNFRXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISED 910
                       + F                  +K CG L   EQ  + H + LK G+  +
Sbjct: 96   YARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVL---EQNEVAHGVCLKMGLL-N 151

Query: 909  NFVGTALLDVYCKCGSLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMII 730
             FV + LLD Y K G +D     F +    ++  W AM+ G+  +G  ++  E+F +M  
Sbjct: 152  GFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRG 211

Query: 729  LGINVD 712
            LG+ ++
Sbjct: 212  LGLGLE 217


>ref|XP_002299515.1| predicted protein [Populus trichocarpa] gi|222846773|gb|EEE84320.1|
            predicted protein [Populus trichocarpa]
          Length = 568

 Score =  427 bits (1097), Expect = e-117
 Identities = 204/413 (49%), Positives = 287/413 (69%)
 Frame = -2

Query: 1767 GSKADGIKMFTEISEPDVVSWAARVGASYDGEEALELFKFLCSKNIEVNEYTIINILSAF 1588
            G + D IK+F EI+EPDVVSW  R+G + DG EA+ELF+ + S  ++VNEYT+IN+LS  
Sbjct: 23   GREVDAIKVFDEIAEPDVVSWTERIGTASDGHEAVELFRIVLSLGLDVNEYTLINVLSMI 82

Query: 1587 GDFRLLKSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCVSWN 1408
            G  + L +GK+IQA C+KTGY  V+SVSNAL+SMYG+C  I +A  VF  M+ RD VSWN
Sbjct: 83   GGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRVFYNMIIRDSVSWN 142

Query: 1407 ALLAVYAENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKS 1228
            +L++  +ENG ++  L++F +MR   L     TLASIL+ ++NS   +   +IH+ ++K 
Sbjct: 143  SLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKC 202

Query: 1227 GFISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFF 1048
            GF+ D SM++CLI AYG+C+ ++ +  +F+EI ++++VH+N ++ T V AGYY DAL  +
Sbjct: 203  GFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALY 262

Query: 1047 RDTWNFRXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISEDNFVGTALLDVYCKC 868
            +  W+             LKAC A+T ++ GR +H+L LK G  +D+FV ++++D+YCKC
Sbjct: 263  QTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKC 322

Query: 867  GSLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGFL 688
            GS+     AF     ++ AAWNAM+MGYA HGC QEVF+LFN+M   GI  DEIT LG L
Sbjct: 323  GSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVL 382

Query: 687  YLCCHSGLVNEACSFLNFMVDRHGVIPRLEHYACVVDLLGRVGKLEDAKNVIN 529
              CCH GLV EA  +L+ M + HG+IP LEHYAC++DLLGRVG LEDAK  I+
Sbjct: 383  SSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKTID 435



 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 72/281 (25%), Positives = 123/281 (43%)
 Frame = -2

Query: 1521 SVISVSNALISMYGRCQCIEEARTVFDEMVHRDCVSWNALLAVYAENGLIDLTLKLFSKM 1342
            S +  SNA++SMY RC    +A  VFDE+   D VSW   +   ++       ++LF  +
Sbjct: 7    SSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASDG---HEAVELFRIV 63

Query: 1341 RHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKSGFISDDSMLTCLIRAYGKCDEI 1162
                L  N++TL ++L ++   K     K+I A   K+G+    S+   L+  YGKC +I
Sbjct: 64   LSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQI 123

Query: 1161 EMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFFRDTWNFRXXXXXXXXXXXLKAC 982
                 +F  +   D V  N++++     G+   AL  F                  L+A 
Sbjct: 124  CDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAV 183

Query: 981  GALTALEQGRIMHALALKCGISEDNFVGTALLDVYCKCGSLDDGRMAFDKLPEDNTAAWN 802
                  +Q   +H+L +KCG   D  + + L+  Y +C S+D+ +  F ++ + N    N
Sbjct: 184  SNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLN 243

Query: 801  AMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGFLYLC 679
             M+  + + G   +   L+  +  L   VD  T    L  C
Sbjct: 244  TMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKAC 284


>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
            [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
            protein product [Vitis vinifera]
          Length = 703

 Score =  255 bits (651), Expect = 3e-65
 Identities = 139/411 (33%), Positives = 224/411 (54%), Gaps = 3/411 (0%)
 Frame = -2

Query: 1767 GSKADGIKMFTEISEPDVVSWAARVGASYDGE---EALELFKFLCSKNIEVNEYTIINIL 1597
            G   +  K+F  + E + VSWA  +      +   EAL LF+ +  +    NE+   ++L
Sbjct: 157  GLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVL 216

Query: 1596 SAFGDFRLLKSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCV 1417
            SA     L+ +GK+I     K G +S++SV NAL++MY +C  +++A   F+    ++ +
Sbjct: 217  SALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSI 276

Query: 1416 SWNALLAVYAENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHI 1237
            +W+A++  YA++G  D  LKLFS M  S +  ++FT   +++  ++  A    K++H ++
Sbjct: 277  TWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYL 336

Query: 1236 LKSGFISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDAL 1057
            LK GF S   ++T L+  Y KC  I      F  + + D+V   +++   V  G  EDAL
Sbjct: 337  LKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDAL 396

Query: 1056 NFFRDTWNFRXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISEDNFVGTALLDVY 877
            + +                  LKAC +L ALEQG+ +HA  +K G   +  +G+AL  +Y
Sbjct: 397  SLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMY 456

Query: 876  CKCGSLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCL 697
             KCG L DG + F ++P  +  +WNAM+ G +Q+GC +E  ELF +M + G   D +T +
Sbjct: 457  AKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFV 516

Query: 696  GFLYLCCHSGLVNEACSFLNFMVDRHGVIPRLEHYACVVDLLGRVGKLEDA 544
              L  C H GLV     +   M D  G+ PR+EHYAC+VD+L R GKL++A
Sbjct: 517  NILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEA 567



 Score =  152 bits (384), Expect = 3e-34
 Identities = 103/360 (28%), Positives = 162/360 (45%), Gaps = 5/360 (1%)
 Frame = -2

Query: 1743 MFTEISEPDVVSWAARV-GASYDG----EEALELFKFLCSKNIEVNEYTIINILSAFGDF 1579
            +F  I   DVVSW   + G S  G       +ELF+ + ++N   N +T   + +A    
Sbjct: 62   VFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTL 121

Query: 1578 RLLKSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCVSWNALL 1399
                 G+   A   K      + V ++L++MY +     EAR VFD M  R+ VSW  ++
Sbjct: 122  VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMI 181

Query: 1398 AVYAENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKSGFI 1219
            + YA   L    L LF  MR      N+F   S+L  L   +     K+IH   +K+G +
Sbjct: 182  SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 241

Query: 1218 SDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFFRDT 1039
            S  S+   L+  Y KC  ++  +  F      + +  +A++     +G  + AL  F   
Sbjct: 242  SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSM 301

Query: 1038 WNFRXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISEDNFVGTALLDVYCKCGSL 859
                           + AC  L A  +G+ +H   LK G     +V TAL+D+Y KC S+
Sbjct: 302  HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361

Query: 858  DDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGFLYLC 679
             D R  FD L E +   W +M+ GY Q+G  ++   L+ +M + GI  +E+T    L  C
Sbjct: 362  VDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKAC 421



 Score =  127 bits (319), Expect = 1e-26
 Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 5/351 (1%)
 Frame = -2

Query: 1578 RLLKSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCVSWNALL 1399
            R L+ GK + A   K+   S + ++N+L+++Y +CQ + EA+ VF+ + ++D VSWN ++
Sbjct: 20   RSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78

Query: 1398 AVYAENGLIDLT--LKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKSG 1225
              Y+++G    +  ++LF +MR      N  T A +    +        +  HA  +K  
Sbjct: 79   NGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMD 138

Query: 1224 FISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFFR 1045
               D  + + L+  Y K         +F  + + + V    +++         +AL  FR
Sbjct: 139  SCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFR 198

Query: 1044 DTWNFRXXXXXXXXXXXLKACGALTALE---QGRIMHALALKCGISEDNFVGTALLDVYC 874
                 R                ALT  E    G+ +H +A+K G+     VG AL+ +Y 
Sbjct: 199  ---LMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYA 255

Query: 873  KCGSLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLG 694
            KCGSLDD    F+   + N+  W+AM+ GYAQ G   +  +LF+ M + GI   E T +G
Sbjct: 256  KCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVG 315

Query: 693  FLYLCCHSGLVNEACSFLNFMVDRHGVIPRLEHYACVVDLLGRVGKLEDAK 541
             +  C   G   E     ++++ + G   ++     +VD+  +   + DA+
Sbjct: 316  VINACSDLGAAWEGKQVHDYLL-KLGFESQIYVMTALVDMYAKCSSIVDAR 365


>ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355511418|gb|AES92560.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  254 bits (649), Expect = 5e-65
 Identities = 137/411 (33%), Positives = 230/411 (55%), Gaps = 3/411 (0%)
 Frame = -2

Query: 1755 DGIKMFTEISEPDVVSWAARVG--ASYD-GEEALELFKFLCSKNIEVNEYTIINILSAFG 1585
            D  K+F  + E + VSWA  +   AS D  ++A+E+F+ +  +    NE+ + ++LSA  
Sbjct: 171  DARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALT 230

Query: 1584 DFRLLKSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCVSWNA 1405
                + +G+++ +   K G ++++SV+NAL++MY +C  +++A   F+    ++ ++W+A
Sbjct: 231  SDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSA 290

Query: 1404 LLAVYAENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKSG 1225
            ++  YA+ G  D  LKLF+KM  S ++ ++FTL  +++  ++  A    K++H+   K G
Sbjct: 291  MVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLG 350

Query: 1224 FISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFFR 1045
            F     +L+ ++  Y KC  +      F  + Q DVV   +I+   V  G YE  LN + 
Sbjct: 351  FGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYG 410

Query: 1044 DTWNFRXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISEDNFVGTALLDVYCKCG 865
                 R           L+AC +L AL+QG+ MHA  +K G   +  +G+AL  +Y KCG
Sbjct: 411  KMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCG 470

Query: 864  SLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGFLY 685
            SLDDG + F ++P  +  +WNAM+ G +Q+G   +  ELF +M++ GI  D +T +  L 
Sbjct: 471  SLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLS 530

Query: 684  LCCHSGLVNEACSFLNFMVDRHGVIPRLEHYACVVDLLGRVGKLEDAKNVI 532
             C H GLV+    +   M D   + P +EHYAC+VD+L R GKL +AK  I
Sbjct: 531  ACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFI 581



 Score =  154 bits (390), Expect = 6e-35
 Identities = 92/357 (25%), Positives = 175/357 (49%), Gaps = 7/357 (1%)
 Frame = -2

Query: 1728 SEPDVVSWAARVGA------SYDGEEALELFK-FLCSKNIEVNEYTIINILSAFGDFRLL 1570
            ++ D VSW + + A      S     A+ LF+  + + N+  N +T+  + SA  +   +
Sbjct: 75   NDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDV 134

Query: 1569 KSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCVSWNALLAVY 1390
             +GK+  +   KTG    + V ++L++MY +   + +AR +FD M  R+ VSW  +++ Y
Sbjct: 135  VAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGY 194

Query: 1389 AENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKSGFISDD 1210
            A + + D  +++F  MR    I N+F L S+L  L +       +++H+  +K+G ++  
Sbjct: 195  ASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIV 254

Query: 1209 SMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFFRDTWNF 1030
            S+   L+  Y KC  ++  +  F      + +  +A++      G  + AL  F    + 
Sbjct: 255  SVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSS 314

Query: 1029 RXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISEDNFVGTALLDVYCKCGSLDDG 850
                        + AC  L A+ +G+ MH+ A K G     +V +A++D+Y KCGSL D 
Sbjct: 315  GVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADA 374

Query: 849  RMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGFLYLC 679
            R  F+ + + +   W +++ GY Q+G  +    L+ +M +  +  +E+T    L  C
Sbjct: 375  RKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRAC 431



 Score =  126 bits (316), Expect = 2e-26
 Identities = 98/350 (28%), Positives = 163/350 (46%), Gaps = 9/350 (2%)
 Frame = -2

Query: 1563 GKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEM--VHRDCVSWNALLAVY 1390
            G+ + A   KTG IS I V+N  +++Y +   +  A T+FD +    +D VSWN+L+  +
Sbjct: 30   GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAF 89

Query: 1389 AEN---GLIDLTLKLFSK-MRHSFLIGNKFTLASILDVLANSKAPELTKEIHAHILKSGF 1222
            ++N         + LF + MR + +I N  TLA +    +N       K+ H+  +K+G 
Sbjct: 90   SQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGC 149

Query: 1221 ISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYEDALNFFRD 1042
              D  + + L+  Y K   +     LF  + + + V    +++    +   + A+  F  
Sbjct: 150  SGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFE- 208

Query: 1041 TWNFRXXXXXXXXXXXLKACGALTA---LEQGRIMHALALKCGISEDNFVGTALLDVYCK 871
                R                ALT+   +  GR +H+LA+K G+     V  AL+ +Y K
Sbjct: 209  --LMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAK 266

Query: 870  CGSLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEITCLGF 691
            CGSLDD    F+   + N+  W+AM+ GYAQ G   +  +LFN+M   G+   E T +G 
Sbjct: 267  CGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGV 326

Query: 690  LYLCCHSGLVNEACSFLNFMVDRHGVIPRLEHYACVVDLLGRVGKLEDAK 541
            +  C     V E     +F   + G   +L   + VVD+  + G L DA+
Sbjct: 327  INACSDLCAVVEGKQMHSFAF-KLGFGLQLYVLSAVVDMYAKCGSLADAR 375



 Score = 82.0 bits (201), Expect = 5e-13
 Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
 Frame = -2

Query: 1767 GSKADGIKMFTEISEPDVVSWAARVGA---SYDGEEALELFKFLCSKNIEVNEYTIINIL 1597
            GS AD  K F  + +PDVV W + +     + D E  L L+  +  + +  NE T+ ++L
Sbjct: 369  GSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVL 428

Query: 1596 SAFGDFRLLKSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRDCV 1417
             A      L  GK++ A   K G+   + + +AL +MY +C  +++   +F  M  RD +
Sbjct: 429  RACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVI 488

Query: 1416 SWNALLAVYAENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLAN 1279
            SWNA+++  ++NG  +  L+LF KM    +  +  T  ++L   ++
Sbjct: 489  SWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSH 534


>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  253 bits (646), Expect = 1e-64
 Identities = 140/417 (33%), Positives = 229/417 (54%), Gaps = 5/417 (1%)
 Frame = -2

Query: 1767 GSKADGIKMFTEISEPDVVSWAARVGASYDGEEALELFKFLCSKNIEV-----NEYTIIN 1603
            GS  D  ++F  I + ++VSW A + A   G + LE +K  C + +++     ++ T ++
Sbjct: 145  GSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYK--CYETMKLAGCKPDKVTFVS 202

Query: 1602 ILSAFGDFRLLKSGKKIQAYCYKTGYISVISVSNALISMYGRCQCIEEARTVFDEMVHRD 1423
            +L+AF +  LL+ G+K+     K G      V  +L+ MY +C  I +A+ +FD++  ++
Sbjct: 203  LLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKN 262

Query: 1422 CVSWNALLAVYAENGLIDLTLKLFSKMRHSFLIGNKFTLASILDVLANSKAPELTKEIHA 1243
             V+W  L+A YA+ G +D+ L+L  KM+ + +  NK T  SIL       A E  K++H 
Sbjct: 263  VVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHR 322

Query: 1242 HILKSGFISDDSMLTCLIRAYGKCDEIEMTMLLFSEIYQIDVVHINAILATLVHAGYYED 1063
            +I++SG+  +  ++  LI  Y KC  ++    LF ++   DVV   A++      G++++
Sbjct: 323  YIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDE 382

Query: 1062 ALNFFRDTWNFRXXXXXXXXXXXLKACGALTALEQGRIMHALALKCGISEDNFVGTALLD 883
            A++ FR                 L +C +   L++G+ +H   +  G S D ++ +AL+ 
Sbjct: 383  AIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVS 442

Query: 882  VYCKCGSLDDGRMAFDKLPEDNTAAWNAMLMGYAQHGCVQEVFELFNQMIILGINVDEIT 703
            +Y KCGS+DD R+ F+++ E N  AW AM+ G AQHG  +E  E F QM   GI  D++T
Sbjct: 443  MYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVT 502

Query: 702  CLGFLYLCCHSGLVNEACSFLNFMVDRHGVIPRLEHYACVVDLLGRVGKLEDAKNVI 532
                L  C H GLV E       M   +G+ P +EHY+C VDLLGR G LE+A+NVI
Sbjct: 503  FTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVI 559



 Score =  157 bits (396), Expect = 1e-35
 Identities = 100/382 (26%), Positives = 172/382 (45%)
 Frame = -2

Query: 1674 EEALELFKFLCSKNIEVNEYTIINILSAFGDFRLLKSGKKIQAYCYKTGYISVISVSNAL 1495
            +EAL +   +  +   V       +L      R L+ G+++ A   K+G      + N L
Sbjct: 78   KEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTL 137

Query: 1494 ISMYGRCQCIEEARTVFDEMVHRDCVSWNALLAVYAENGLIDLTLKLFSKMRHSFLIGNK 1315
            +SMY +C  + +AR VFD +  R+ VSW A++  +          K +  M+ +    +K
Sbjct: 138  LSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDK 197

Query: 1314 FTLASILDVLANSKAPELTKEIHAHILKSGFISDDSMLTCLIRAYGKCDEIEMTMLLFSE 1135
             T  S+L+   N +  ++ +++H  I K+G   +  + T L+  Y KC +I    ++F +
Sbjct: 198  VTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDK 257

Query: 1134 IYQIDVVHINAILATLVHAGYYEDALNFFRDTWNFRXXXXXXXXXXXLKACGALTALEQG 955
            + + +VV    ++A     G  + AL                     L+ C    ALE G
Sbjct: 258  LPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHG 317

Query: 954  RIMHALALKCGISEDNFVGTALLDVYCKCGSLDDGRMAFDKLPEDNTAAWNAMLMGYAQH 775
            + +H   ++ G   + +V  AL+ +YCKCG L + R  F  LP  +   W AM+ GYAQ 
Sbjct: 318  KKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQL 377

Query: 774  GCVQEVFELFNQMIILGINVDEITCLGFLYLCCHSGLVNEACSFLNFMVDRHGVIPRLEH 595
            G   E  +LF +M   GI  D++T    L  C     + E  S    +V   G    +  
Sbjct: 378  GFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLV-HAGYSLDVYL 436

Query: 594  YACVVDLLGRVGKLEDAKNVIN 529
             + +V +  + G ++DA+ V N
Sbjct: 437  QSALVSMYAKCGSMDDARLVFN 458