BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00002957
         (2706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...  1165   0.0  
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,...  1119   0.0  
ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containi...  1107   0.0  
ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containi...  1104   0.0  
ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thalia...  1037   0.0  

>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic [Vitis vinifera]
          Length = 867

 Score = 1165 bits (3013), Expect = 0.0
 Identities = 598/841 (71%), Positives = 693/841 (82%), Gaps = 22/841 (2%)
 Frame = -2

Query: 2681 HPHNFHVSS----------SARNVSKPSCTNP--------NFXXXXXXXXXXSELGADFH 2556
            H +N H SS          S RN +KP   +P        NF          SEL ADF 
Sbjct: 30   HHNNHHWSSHKVSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSPLPPSKSELTADFS 89

Query: 2555 GRRSTRLVSKMHFGRPKTAVGSRHTSXXXXXXXXXXXLPS----LDSVLLSYESKLSGSD 2388
            GRRSTR VSKMHFGRPKTA  +RHTS             S    +DSVLL++ES+L GSD
Sbjct: 90   GRRSTRFVSKMHFGRPKTAAAARHTSTAEEALRHAIRFASDDKGIDSVLLNFESRLCGSD 149

Query: 2387 DYGFLLRELGNRGECLKAVRCFEFAVRRERKRSEQGKLASTMISVLGRLGRVDLAKSVFD 2208
            DY FLLRELGNRGE  KA+RCFEFAVRRE++R+EQGKLAS MIS+LGRLG+V+LAK+VF+
Sbjct: 150  DYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFE 209

Query: 2207 TANRDGYGNTVYAFSALISAYGRSGCYDKALKVFDSMKMSGLKPNLVTYNAVIDACAKGG 2028
            TA  +GYGNTVYAFSALISAYGRSG  D+A+KVF++MK SGLKPNLVTYNAVIDAC KGG
Sbjct: 210  TALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGG 269

Query: 2027 VEYGRAVEVFDEMVRNGVQPDRITFNSLLAVCSRGGLWEQARNLFSEMVYRGIDQDIFTY 1848
            V++ RA E+FDEM+RNGVQPDRITFNSLLAVC RGGLWE ARNLFSEM+YRGI+QDIFTY
Sbjct: 270  VDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTY 329

Query: 1847 NTLLDAVCKGGQMDVAFEIMREMSQKNVWPNVVSYSTMIDGCAKVGKLEEALSLFDEMKH 1668
            NTLLDAVCKGGQMD+AF+IM EM +K++ PNVV+YST+IDG AK G+L+EAL+LF+EMK 
Sbjct: 330  NTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKF 389

Query: 1667 LGIVLDRVSYNTLLAIYANLGRFEEALGVCKTMEHAGIKKDVVTYNALLRNYGKQGIHDE 1488
              I LDRVSYNTLL+IYA LGRFEEAL VCK ME +GIKKD VTYNALL  YGKQG ++E
Sbjct: 390  ASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEE 449

Query: 1487 VKRLFSEMKEEKLRPNLLTYSTLIDVYSKGSLYKEAMEIFRELKQSGLEADVVLYSALID 1308
            VKR+F EMK E++ PNLLTYSTLIDVYSKG LY+EAME+FRE K++GL+ADVVLYSALID
Sbjct: 450  VKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALID 509

Query: 1307 SLCKNGLVESAVSLLDEMTREGKPPNVVTYNSIIDAFGRSAVTQFHDDIPCGTDEPWKEA 1128
            +LCKNGLVESAVS LDEMT+EG  PNVVTYNSIIDAFGRS   +   D P  T+     +
Sbjct: 510  ALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETNVSKMSS 569

Query: 1127 STCLSLQNANEGKEGDEGSDDRVMKLFEQLVMEKAHPSKEDTKGKSKELLCILGLFHKMH 948
            S+   +++A E + GD+  D++++K+F QL  EK   +K++ +G+ +E+LCIL +FHKMH
Sbjct: 570  SSLKVVEDATESEVGDK-EDNQIIKIFGQLAAEKTCHAKKENRGR-QEILCILAVFHKMH 627

Query: 947  ELKIKPNVVTFSAILNACSRCNSFEDASVLLEELRLFDNQVYGVAHGLLMGTRENVWIQA 768
            EL IKPNVVTFSAILNACSRCNSFEDAS+LLEELRLFDNQVYGVAHGLLMG  +NVW+QA
Sbjct: 628  ELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYGDNVWVQA 687

Query: 767  QTLFDEVKRMDVSTASAFYNALTDMLWHFGQRQGARLVVLEGKSRHVWENAWCDSCLDLH 588
            Q+LFDEVK+MD STASAFYNALTDMLWHFGQR+GA+LVVLEGK RHVWEN W +SCLDLH
Sbjct: 688  QSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHVWENMWSNSCLDLH 747

Query: 587  LMSSGAAQAMVHAWLLNIRSIVFKGHELPKLLSILTGWGKHSKVIGDGTLRRVIQALLIR 408
            LMSSGAA+AMVHAWLLNIRSIVF+GHELP+LLSILTGWGKHSKV+GDG LRR I+ALL  
Sbjct: 748  LMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWGKHSKVVGDGALRRAIEALLTG 807

Query: 407  IGAPFHVAKCNLGRFISTGSVVAAWLRESGTLKVLILHDDKTHPDTLRLSEQQLDLQILP 228
            +GAPF VAKCNLGRFISTG+VVAAWLRESGTLKVL+LHDD+T+PD  R S Q  +LQ LP
Sbjct: 808  MGAPFRVAKCNLGRFISTGAVVAAWLRESGTLKVLVLHDDRTNPDRARCS-QISNLQTLP 866

Query: 227  M 225
            +
Sbjct: 867  L 867


>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score = 1119 bits (2894), Expect = 0.0
 Identities = 576/812 (70%), Positives = 670/812 (82%), Gaps = 6/812 (0%)
 Frame = -2

Query: 2690 LHPHPHNFHVSSSARNVSKPS--CTNPNFXXXXXXXXXXSELGADFHGRRSTRLVSKMHF 2517
            L P P N   +++A   +  +    NP F          S+L ADF GRRSTR VSK+HF
Sbjct: 49   LAPSPCNAPKAAAAAAAATTTHHTPNPTFHSLSPLQSQKSDLSADFSGRRSTRFVSKLHF 108

Query: 2516 GRPKTAVGSRHTSXXXXXXXXXXXL----PSLDSVLLSYESKLSGSDDYGFLLRELGNRG 2349
            GRPKT + +RHTS                 +L++VLL++ES+L G DDY FLLRELGNRG
Sbjct: 109  GRPKTNM-NRHTSVALEALQQVIQYGKDDKALENVLLNFESRLCGPDDYTFLLRELGNRG 167

Query: 2348 ECLKAVRCFEFAVRRERKRSEQGKLASTMISVLGRLGRVDLAKSVFDTANRDGYGNTVYA 2169
            +  KAVRCFEFAVRRE  ++EQGKLAS MIS LGRLG+V+LAK+VFDTA ++GYG TVYA
Sbjct: 168  DSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYA 227

Query: 2168 FSALISAYGRSGCYDKALKVFDSMKMSGLKPNLVTYNAVIDACAKGGVEYGRAVEVFDEM 1989
            FSALISAYGRSG  ++A+KVFDSMK +GL PNLVTYNAVIDAC KGGVE+ + VE+FD M
Sbjct: 228  FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287

Query: 1988 VRNGVQPDRITFNSLLAVCSRGGLWEQARNLFSEMVYRGIDQDIFTYNTLLDAVCKGGQM 1809
            + NGVQPDRITFNSLLAVCSRGGLWE AR LFS MV +GIDQDIFTYNTLLDAVCKGGQM
Sbjct: 288  LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQM 347

Query: 1808 DVAFEIMREMSQKNVWPNVVSYSTMIDGCAKVGKLEEALSLFDEMKHLGIVLDRVSYNTL 1629
            D+AFEIM EM  KN+ PNVV+YSTMIDG AKVG+L++AL++F+EMK LG+ LDRVSYNTL
Sbjct: 348  DLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTL 407

Query: 1628 LAIYANLGRFEEALGVCKTMEHAGIKKDVVTYNALLRNYGKQGIHDEVKRLFSEMKEEKL 1449
            L++YA LGRFE+AL VCK ME+AGI+KDVVTYNALL  YGKQ  +DEV+R+F EMK  ++
Sbjct: 408  LSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRV 467

Query: 1448 RPNLLTYSTLIDVYSKGSLYKEAMEIFRELKQSGLEADVVLYSALIDSLCKNGLVESAVS 1269
             PNLLTYSTLIDVYSKG LYKEAME+FRE KQ+GL+ADVVLYSALID+LCKNGLVES+V+
Sbjct: 468  SPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVT 527

Query: 1268 LLDEMTREGKPPNVVTYNSIIDAFGRSAVTQFHDDIPCGTDEPWKEASTCLSLQNANEGK 1089
            LLDEMT+EG  PNVVTYNSIIDAFGRSA  Q   D    T     E+ + + +Q A E +
Sbjct: 528  LLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQ 587

Query: 1088 EGDEGSDDRVMKLFEQLVMEKAHPSKEDTKGKSKELLCILGLFHKMHELKIKPNVVTFSA 909
              D+  D+R++++F +L  EKA  +K   K   +E+LCILG+F KMHELKIKPNVVTFSA
Sbjct: 588  AADK-EDNRIIEIFGKLAAEKACEAKNSGK---QEILCILGVFQKMHELKIKPNVVTFSA 643

Query: 908  ILNACSRCNSFEDASVLLEELRLFDNQVYGVAHGLLMGTRENVWIQAQTLFDEVKRMDVS 729
            ILNACSRC+SFEDAS+LLEELRLFDNQVYGVAHGLLMG RENVW+QAQ+LFDEVK MD S
Sbjct: 644  ILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLMGYRENVWLQAQSLFDEVKLMDSS 703

Query: 728  TASAFYNALTDMLWHFGQRQGARLVVLEGKSRHVWENAWCDSCLDLHLMSSGAAQAMVHA 549
            TASAFYNALTDMLWHFGQ++GA+LVVLEGK R VWEN W DSCLDLHLMSSGAA+AMVHA
Sbjct: 704  TASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENIWSDSCLDLHLMSSGAARAMVHA 763

Query: 548  WLLNIRSIVFKGHELPKLLSILTGWGKHSKVIGDGTLRRVIQALLIRIGAPFHVAKCNLG 369
            WLLNIRSIVF+GHELPKLLSILTGWGKHSKV+GD  LRR ++ALLI +GAPF +AKCNLG
Sbjct: 764  WLLNIRSIVFEGHELPKLLSILTGWGKHSKVVGDSALRRAVEALLIGMGAPFRLAKCNLG 823

Query: 368  RFISTGSVVAAWLRESGTLKVLILHDDKTHPD 273
            RFISTGSVVAAWL+ESGTL+VL+LHDD+THP+
Sbjct: 824  RFISTGSVVAAWLKESGTLEVLVLHDDRTHPE 855


>ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1107 bits (2864), Expect = 0.0
 Identities = 556/800 (69%), Positives = 663/800 (82%), Gaps = 4/800 (0%)
 Frame = -2

Query: 2657 SSARNVSKPSCTNPNFXXXXXXXXXXSELGADFHGRRSTRLVSKMHFGRPKTAVGSRHTS 2478
            S+ ++ S P   +PNF          SEL ++F GRRSTR VSK HFGRPK+++ +RH++
Sbjct: 58   SATKSTSTPLSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHSA 117

Query: 2477 XXXXXXXXXXXL----PSLDSVLLSYESKLSGSDDYGFLLRELGNRGECLKAVRCFEFAV 2310
                             SLD++LL++ESKL GS+DY FLLRELGNRGEC KA+RCF+FA+
Sbjct: 118  IAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 177

Query: 2309 RRERKRSEQGKLASTMISVLGRLGRVDLAKSVFDTANRDGYGNTVYAFSALISAYGRSGC 2130
             RE +++E+GKLAS MIS LGRLG+V+LAK VF+TA  +GYGNTV+AFSALISAYG+SG 
Sbjct: 178  VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 237

Query: 2129 YDKALKVFDSMKMSGLKPNLVTYNAVIDACAKGGVEYGRAVEVFDEMVRNGVQPDRITFN 1950
            +D+A+KVF+SMK+SGLKPNLVTYNAVIDAC KGGVE+ R VE+F+EM+RNGVQPDRIT+N
Sbjct: 238  FDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYN 297

Query: 1949 SLLAVCSRGGLWEQARNLFSEMVYRGIDQDIFTYNTLLDAVCKGGQMDVAFEIMREMSQK 1770
            SLLAVCSRGGLWE ARNLF+EM+ RGIDQD+FTYNTLLDAVCKGGQMD+A+EIM EM  K
Sbjct: 298  SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK 357

Query: 1769 NVWPNVVSYSTMIDGCAKVGKLEEALSLFDEMKHLGIVLDRVSYNTLLAIYANLGRFEEA 1590
             + PNVV+YSTM DG AK G+LE+AL+L++EMK LGI LDRVSYNTLL+IYA LGRFE+A
Sbjct: 358  KILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDA 417

Query: 1589 LGVCKTMEHAGIKKDVVTYNALLRNYGKQGIHDEVKRLFSEMKEEKLRPNLLTYSTLIDV 1410
            L VCK M  +G+KKDVVTYNALL  YGKQG  +EV R+F EMK++++ PNLLTYSTLIDV
Sbjct: 418  LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDV 477

Query: 1409 YSKGSLYKEAMEIFRELKQSGLEADVVLYSALIDSLCKNGLVESAVSLLDEMTREGKPPN 1230
            YSKGSLY+EAME+FRE KQ+GL+ADVVLYS LI++LCKNGLV+SAV LLDEMT+EG  PN
Sbjct: 478  YSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPN 537

Query: 1229 VVTYNSIIDAFGRSAVTQFHDDIPCGTDEPWKEASTCLSLQNANEGKEGDEGSDDRVMKL 1050
            VVTYNSIIDAFGRS   +F  D    ++E   E+ T + ++  +E +      D  V K 
Sbjct: 538  VVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESE--INWDDGHVFKF 595

Query: 1049 FEQLVMEKAHPSKEDTKGKSKELLCILGLFHKMHELKIKPNVVTFSAILNACSRCNSFED 870
            ++QLV EK  P+K++  GK +E+  IL +F KMHEL+IKPNVVTFSAILNACSRC S ED
Sbjct: 596  YQQLVSEKEGPAKKERLGK-EEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIED 654

Query: 869  ASVLLEELRLFDNQVYGVAHGLLMGTRENVWIQAQTLFDEVKRMDVSTASAFYNALTDML 690
            AS+LLEELRLFDNQVYGVAHGLLMG  ENVWIQAQ LFDEVK+MD STASAFYNALTDML
Sbjct: 655  ASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDML 714

Query: 689  WHFGQRQGARLVVLEGKSRHVWENAWCDSCLDLHLMSSGAAQAMVHAWLLNIRSIVFKGH 510
            WHFGQ++GA+LVVLEGK R VWE  W DSCLDLHLMSSGAA+AMVHAWLL I S+VF+GH
Sbjct: 715  WHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGH 774

Query: 509  ELPKLLSILTGWGKHSKVIGDGTLRRVIQALLIRIGAPFHVAKCNLGRFISTGSVVAAWL 330
            +LPKLLSILTGWGKHSKV+GDG LRR I+ALL  +GAPF VAKCN+GR++STGSVVAAWL
Sbjct: 775  QLPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWL 834

Query: 329  RESGTLKVLILHDDKTHPDT 270
            +ESGTLK+L+LHDD+THPDT
Sbjct: 835  KESGTLKLLVLHDDRTHPDT 854


>ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1104 bits (2856), Expect = 0.0
 Identities = 554/800 (69%), Positives = 663/800 (82%), Gaps = 4/800 (0%)
 Frame = -2

Query: 2657 SSARNVSKPSCTNPNFXXXXXXXXXXSELGADFHGRRSTRLVSKMHFGRPKTAVGSRHTS 2478
            S+ ++ S P   +PNF          SEL ++F GRRSTR VSK HFGRPK+++ +RH++
Sbjct: 58   SATKSTSTPLSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHSA 117

Query: 2477 XXXXXXXXXXXL----PSLDSVLLSYESKLSGSDDYGFLLRELGNRGECLKAVRCFEFAV 2310
                             SLD++LL++ESKL GS+DY FLLRELGNRGEC KA+RCF+FA+
Sbjct: 118  IAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 177

Query: 2309 RRERKRSEQGKLASTMISVLGRLGRVDLAKSVFDTANRDGYGNTVYAFSALISAYGRSGC 2130
             RE +++E+GKLAS MIS LGRLG+V+LAK VF+TA  +GYGNTV+AFSALISAYG+SG 
Sbjct: 178  VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 237

Query: 2129 YDKALKVFDSMKMSGLKPNLVTYNAVIDACAKGGVEYGRAVEVFDEMVRNGVQPDRITFN 1950
            +D+A+KVF+SMK+SGLKPNLVTYNAVIDAC KGGVE+ R VE+F+EM+RNGVQPDRIT+N
Sbjct: 238  FDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYN 297

Query: 1949 SLLAVCSRGGLWEQARNLFSEMVYRGIDQDIFTYNTLLDAVCKGGQMDVAFEIMREMSQK 1770
            SLLAVCSRGGLWE ARNLF+EM+ RGIDQD+FTYNTLLDAVCKGGQMD+A+EIM EM  K
Sbjct: 298  SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK 357

Query: 1769 NVWPNVVSYSTMIDGCAKVGKLEEALSLFDEMKHLGIVLDRVSYNTLLAIYANLGRFEEA 1590
             + PNVV+YSTM DG AK G+LE+AL+L++EMK LGI LDRVSYNTLL+IYA LGRFE+A
Sbjct: 358  KILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDA 417

Query: 1589 LGVCKTMEHAGIKKDVVTYNALLRNYGKQGIHDEVKRLFSEMKEEKLRPNLLTYSTLIDV 1410
            L VCK M  +G+KKDVVTYNALL  YGKQG  +EV R+F EMK++++ PNLLTYSTLIDV
Sbjct: 418  LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDV 477

Query: 1409 YSKGSLYKEAMEIFRELKQSGLEADVVLYSALIDSLCKNGLVESAVSLLDEMTREGKPPN 1230
            YSKGSLY+EAME+FRE KQ+GL+ADVVLYS LI++LCKNGLV+SAV LLDEMT+EG  PN
Sbjct: 478  YSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPN 537

Query: 1229 VVTYNSIIDAFGRSAVTQFHDDIPCGTDEPWKEASTCLSLQNANEGKEGDEGSDDRVMKL 1050
            VVTYNSIIDAFGRS   +F  D    ++E   E+ + + ++  +E +      D  V K 
Sbjct: 538  VVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESE--INWDDGHVFKF 595

Query: 1049 FEQLVMEKAHPSKEDTKGKSKELLCILGLFHKMHELKIKPNVVTFSAILNACSRCNSFED 870
            ++QLV EK  P+K++  GK +E+  IL +F KMHEL+IKPNVVTFSAILNACSRC S ED
Sbjct: 596  YQQLVSEKEGPAKKERLGK-EEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIED 654

Query: 869  ASVLLEELRLFDNQVYGVAHGLLMGTRENVWIQAQTLFDEVKRMDVSTASAFYNALTDML 690
            AS+LLEELRLFDNQVYGVAHGLLMG  ENVWIQAQ LFDEVK+MD STASAFYNALTDML
Sbjct: 655  ASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDML 714

Query: 689  WHFGQRQGARLVVLEGKSRHVWENAWCDSCLDLHLMSSGAAQAMVHAWLLNIRSIVFKGH 510
            WHFGQ++GA+LVVLEGK R VWE  W DSCLDLHLMSSGAA+AMVHAWLL I S+VF+GH
Sbjct: 715  WHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGH 774

Query: 509  ELPKLLSILTGWGKHSKVIGDGTLRRVIQALLIRIGAPFHVAKCNLGRFISTGSVVAAWL 330
            +LPKLLSILTGWGKHSKV+GDG LRR I+ALL  +GAPF VAKCN+GR++STGSVVAAWL
Sbjct: 775  QLPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWL 834

Query: 329  RESGTLKVLILHDDKTHPDT 270
            +ESGTLK+L+LHDD+THPD+
Sbjct: 835  KESGTLKLLVLHDDRTHPDS 854


>ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
            gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g31400, chloroplastic; Flags: Precursor
            gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis
            thaliana] gi|330253448|gb|AEC08542.1| genomes uncoupled 1
            protein [Arabidopsis thaliana]
          Length = 918

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 529/784 (67%), Positives = 625/784 (79%), Gaps = 8/784 (1%)
 Frame = -2

Query: 2576 ELGADFHGRRSTRLVSKMHFGRPKTAVGSRHTSXXXXXXXXXXXLPSLD----SVLLSYE 2409
            +L +DF GRRSTR VSKMHFGR KT + +RH+S               D    S++LS+E
Sbjct: 131  DLSSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFE 190

Query: 2408 SKLSGSDDYGFLLRELGNRGECLKAVRCFEFAVRRERKRSEQGKLASTMISVLGRLGRVD 2229
            SKL GSDD  +++RELGNR EC KAV  +EFAV+RER+++EQGKLAS MIS LGR G+V 
Sbjct: 191  SKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVT 250

Query: 2228 LAKSVFDTANRDGYGNTVYAFSALISAYGRSGCYDKALKVFDSMKMSGLKPNLVTYNAVI 2049
            +AK +F+TA   GYGNTVYAFSALISAYGRSG +++A+ VF+SMK  GL+PNLVTYNAVI
Sbjct: 251  IAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310

Query: 2048 DACAKGGVEYGRAVEVFDEMVRNGVQPDRITFNSLLAVCSRGGLWEQARNLFSEMVYRGI 1869
            DAC KGG+E+ +  + FDEM RNGVQPDRITFNSLLAVCSRGGLWE ARNLF EM  R I
Sbjct: 311  DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370

Query: 1868 DQDIFTYNTLLDAVCKGGQMDVAFEIMREMSQKNVWPNVVSYSTMIDGCAKVGKLEEALS 1689
            +QD+F+YNTLLDA+CKGGQMD+AFEI+ +M  K + PNVVSYST+IDG AK G+ +EAL+
Sbjct: 371  EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

Query: 1688 LFDEMKHLGIVLDRVSYNTLLAIYANLGRFEEALGVCKTMEHAGIKKDVVTYNALLRNYG 1509
            LF EM++LGI LDRVSYNTLL+IY  +GR EEAL + + M   GIKKDVVTYNALL  YG
Sbjct: 431  LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490

Query: 1508 KQGIHDEVKRLFSEMKEEKLRPNLLTYSTLIDVYSKGSLYKEAMEIFRELKQSGLEADVV 1329
            KQG +DEVK++F+EMK E + PNLLTYSTLID YSKG LYKEAMEIFRE K +GL ADVV
Sbjct: 491  KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550

Query: 1328 LYSALIDSLCKNGLVESAVSLLDEMTREGKPPNVVTYNSIIDAFGRSAVTQFHDDIPCGT 1149
            LYSALID+LCKNGLV SAVSL+DEMT+EG  PNVVTYNSIIDAFGRSA      D   G 
Sbjct: 551  LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGG 610

Query: 1148 DEPWKEASTCLSLQNANEGKEGDEGSDDRVMKLFEQLVMEKAHPSKEDTKGKSKELLCIL 969
              P+  +S+ LS     EG        +RV++LF QL  E  + + +D +   +EL CIL
Sbjct: 611  SLPF--SSSALSALTETEG--------NRVIQLFGQLTTESNNRTTKDCEEGMQELSCIL 660

Query: 968  GLFHKMHELKIKPNVVTFSAILNACSRCNSFEDASVLLEELRLFDNQVYGVAHGLLMGTR 789
             +F KMH+L+IKPNVVTFSAILNACSRCNSFEDAS+LLEELRLFDN+VYGV HGLLMG R
Sbjct: 661  EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQR 720

Query: 788  ENVWIQAQTLFDEVKRMDVSTASAFYNALTDMLWHFGQRQGARLVVLEGKSRHVWENAWC 609
            ENVW+QAQ+LFD+V  MD STASAFYNALTDMLWHFGQ++GA LV LEG+SR VWEN W 
Sbjct: 721  ENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWS 780

Query: 608  DSCLDLHLMSSGAAQAMVHAWLLNIRSIVFKGHELPKLLSILTGWGKHSKVIGDGTLRRV 429
            DSCLDLHLMSSGAA+AMVHAWLLNIRSIV++GHELPK+LSILTGWGKHSKV+GDG LRR 
Sbjct: 781  DSCLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRA 840

Query: 428  IQALLIRIGAPFHVAKCNLGRFISTGSVVAAWLRESGTLKVLILHDDKT----HPDTLRL 261
            ++ LL  + APFH++KCN+GRF S+GSVVA WLRES TLK+LILHD  T       T++ 
Sbjct: 841  VEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHDHITTATATTTTMKS 900

Query: 260  SEQQ 249
            ++QQ
Sbjct: 901  TDQQ 904