BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00002883
         (2225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicag...   125   5e-26
ref|XP_003612651.1| Replication factor A protein [Medicago trunc...   124   1e-25
gb|AFW85172.1| hypothetical protein ZEAMMB73_007991 [Zea mays]         91   1e-15
ref|NP_001143203.1| uncharacterized protein LOC100275706 [Zea ma...    91   1e-15
gb|AFW63447.1| hypothetical protein ZEAMMB73_293789 [Zea mays]         89   6e-15

>ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicago truncatula]
            gi|357477581|ref|XP_003609076.1| Replication factor A 51
            kDa subunit [Medicago truncatula]
            gi|357477673|ref|XP_003609122.1| Replication factor A 51
            kDa subunit [Medicago truncatula]
            gi|355507966|gb|AES89108.1| Replication factor A 51 kDa
            subunit [Medicago truncatula] gi|355510131|gb|AES91273.1|
            Replication factor A 51 kDa subunit [Medicago truncatula]
            gi|355510177|gb|AES91319.1| Replication factor A 51 kDa
            subunit [Medicago truncatula]
          Length = 502

 Score =  125 bits (314), Expect = 5e-26
 Identities = 101/344 (29%), Positives = 169/344 (49%), Gaps = 12/344 (3%)
 Frame = +3

Query: 42   DLSFPPQKFSLMNFKDIFKKWNNADVLIDVIGFWSELGKKKIVSTKRGSSPLQNLHITDN 221
            D + P   F  +NF D+ K+    +VL DVIGF  ++   +  +T  G   + +LH+ D 
Sbjct: 136  DNTIPRYIFEFVNFNDLIKRCGK-EVLADVIGFIIDVDPIEEKTTVNGKVDMLSLHLGDG 194

Query: 222  DGNKLMIAFWGETIKQIPPE--DTFDAT-QMKVVILTSTSVRRF--NEEYHLQASFATKV 386
             GN L +  W +       +  D   AT +  V I TST V+++  N E ++ +S +T +
Sbjct: 195  SGNVLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRSTTI 254

Query: 387  YVEYDTPEVTSFKNRGLNPSEKLTPPPKLTIKRTTDDFEHQVVNDKTNIKEILS-AVTIV 563
            Y+  DTPEV             L+   K ++ +TT+      V+ KT I E+LS AV+ V
Sbjct: 255  YINIDTPEVADLI---------LSSKGKNSVLKTTETLSLTNVDVKT-ISELLSMAVSGV 304

Query: 564  SSKDV-HSCTATITKVHTNRGWYYTSCKKCMKVVKRKDGDIWYFNCNGFVEHVE----RF 728
               DV ++C AT+  +    G YY SC  C K V   + D   FNC    + V+    R+
Sbjct: 305  YQGDVVYNCVATVDDILLKNGLYYVSCPHCRKTVSSTETD---FNCEHCTKKVDYPKIRY 361

Query: 729  KIQFEIEDESGTMDVTVFAAVAETLIGHSIDSMI-DIINKGDDDQAVYDIIEKNVVGKQY 905
            +++ ++ D + +    +FA VAE L    +D +  D+ N+   D  +   ++ +++G ++
Sbjct: 362  RLELQVNDSTESTIFVLFAEVAEQLAQLKLDDLTPDLENQTGRDSDLPKQLQ-HIIGSKH 420

Query: 906  NFSLKISNYNRQNPMSSLTAIKIVTVEADGKKEKGKQVELPSSS 1037
             F +K+S+Y  +  + S TA KI+      +KE        SSS
Sbjct: 421  IFQVKLSSYFERRGVQSFTAHKILKPVVKIEKEDNIATACSSSS 464


>ref|XP_003612651.1| Replication factor A protein [Medicago truncatula]
            gi|355513986|gb|AES95609.1| Replication factor A protein
            [Medicago truncatula]
          Length = 477

 Score =  124 bits (311), Expect = 1e-25
 Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 14/346 (4%)
 Frame = +3

Query: 42   DLSFPPQKFSLMNFKDIFKKWNNADVLIDVIGFWSELGKKKIVSTKRGSSPLQNLHITDN 221
            D + P   F  +NF D+ K+    +VL DVIGF  ++   +  +T  G   + +LH+ D 
Sbjct: 104  DNTIPRYIFEFVNFNDLIKRCGK-EVLADVIGFIIDVDPIEEKTTVNGKVDMLSLHLGDG 162

Query: 222  DGNKLMIAFWGETIKQIPPE--DTFDAT-QMKVVILTSTSVRRF--NEEYHLQASFATKV 386
             GN L +  W +       +  D   AT +  V I TST V+++  N E ++ +S +T +
Sbjct: 163  SGNVLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRSTTI 222

Query: 387  YVEYDTPEVTSF--KNRGLNPSEKLTPPPKLTIKRTTDDFEHQVVNDKTNIKEILS-AVT 557
            Y+  DTPEV      ++G N           ++ +TT+      V+ KT I E+LS AV+
Sbjct: 223  YINIDTPEVADLILSSKGEN-----------SVLKTTETLSLTNVDVKT-ISELLSMAVS 270

Query: 558  IVSSKDV-HSCTATITKVHTNRGWYYTSCKKCMKVVKRKDGDIWYFNCNGFVEHVE---- 722
             V   DV ++C AT+  +    G YY SC  C K V   + D   FNC    + V+    
Sbjct: 271  GVYQGDVVYNCVATVDDILLKNGLYYVSCPHCRKTVSSTETD---FNCEHCTKKVDYPKI 327

Query: 723  RFKIQFEIEDESGTMDVTVFAAVAETLIGHSIDSMI-DIINKGDDDQAVYDIIEKNVVGK 899
            R++++ ++ D + +    +FA VAE L    +D +  D+ N+   D  +   ++ +++G 
Sbjct: 328  RYRLELQVNDSTESTIFVLFAEVAEQLAQLKLDDLTPDLENQTGRDSDLPKQLQ-HIIGS 386

Query: 900  QYNFSLKISNYNRQNPMSSLTAIKIVTVEADGKKEKGKQVELPSSS 1037
            ++ F +K+S+Y  +  + S TA KI+      +KE        SSS
Sbjct: 387  KHIFQVKLSSYFERRGVQSFTAHKILKPVVKIEKEDNIATACSSSS 432


>gb|AFW85172.1| hypothetical protein ZEAMMB73_007991 [Zea mays]
          Length = 504

 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 2/262 (0%)
 Frame = +3

Query: 48  SFPPQKFSLMNFKDIFKKWNNADVLIDVIGFWSELGKKKIVSTKRGSSPLQNLHITDNDG 227
           +FP   + L +F+DI    +N   LIDV+G  +E+G    V     S+ ++++ + D + 
Sbjct: 114 NFPRYAYKLTSFEDISDNVDNKTYLIDVLGILTEIGSLHHVGYNN-SNIIRDIFLKDINN 172

Query: 228 NKLMIAFWGETIKQIPPEDTFDATQMK--VVILTSTSVRRFNEEYHLQASFATKVYVEYD 401
               +  WG        ++  D    K  V++      +RF  E +L A+ A   Y   D
Sbjct: 173 ASTKVTLWGHQASSFSVDNICDENDNKPVVILFVGCLAKRFKGEAYLSATAACTWYFNPD 232

Query: 402 TPEVTSFKNRGLNPSEKLTPPPKLTIKRTTDDFEHQVVNDKTNIKEILSAVTIVSSKDVH 581
            PE   + N+ LN    +  P     +       +  + DKT I+E+L     +  +   
Sbjct: 233 IPEAQMYYNKLLNTKLHMIRPQATAEELQASQTPN--IEDKT-IEELLQLDPDMFPEQGF 289

Query: 582 SCTATITKVHTNRGWYYTSCKKCMKVVKRKDGDIWYFNCNGFVEHVERFKIQFEIEDESG 761
            CT TI+++  N  W++ SC KC K   +        +CNG  E   R+K+ F   D + 
Sbjct: 290 RCTVTISRLVQNGRWWFPSCIKCNKSSSQTSTGYQCTSCNG-TETEFRYKLSFIATDGTS 348

Query: 762 TMDVTVFAAVAETLIGHSIDSM 827
             +   F  +A  ++G S  ++
Sbjct: 349 EAEFFCFDTIARRIVGKSCQTL 370


>ref|NP_001143203.1| uncharacterized protein LOC100275706 [Zea mays]
            gi|195615746|gb|ACG29703.1| hypothetical protein [Zea
            mays]
          Length = 422

 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 8/339 (2%)
 Frame = +3

Query: 48   SFPPQKFSLMNFKDIFKKWNNADVLIDVIGFWSELGKKKIVSTKRGSSPLQNLHITDNDG 227
            +FP   + L +F++I    +N   LIDV+G  +E+G    V     S+ ++++ + D + 
Sbjct: 20   TFPRYAYKLTSFENIGNNVDNKTYLIDVLGILTEIGSLHHVGYNN-SNIIRDIFLKDINN 78

Query: 228  NKLMIAFWGETIKQIPPEDTFDATQMK--VVILTSTSVRRFNEEYHLQASFATKVYVEYD 401
                +  WG        ++  D    K  VV+      +RF  E +L A+ A   Y   D
Sbjct: 79   TSTKVTLWGHQASSFSVDNNCDENDNKPVVVLFVGCLAKRFKGEAYLSATTACTWYFNPD 138

Query: 402  TPEVTSFKNRGLNPSEKLTPPPKLTIKRTTDDFE-HQVVN--DKTNIKEILSAVTIVSSK 572
             PE   + ++ LN   ++  P     + T  +F+  Q +N  DKT I+E+L     +  +
Sbjct: 139  IPEAQVYYSKLLNTKLQMIRP-----QATEQEFQASQTLNIEDKT-IEELLQLDPDMFPQ 192

Query: 573  DVHSCTATITKVHTNRGWYYTSCKKCMKVVKRKDGDIWYFNCNGFVEHVERFKIQFEIED 752
                CT TI+++  +  W++ SC KC K   +        +CNG  E   R+K+ F   D
Sbjct: 193  QGFKCTVTISRLVQDGRWWFPSCIKCNKSSSQTSTGYQCTSCNG-TETEFRYKLSFIATD 251

Query: 753  ESGTMDVTVFAAVAETLIGHSIDSMI---DIINKGDDDQAVYDIIEKNVVGKQYNFSLKI 923
             +   +   F  +A+ ++G S  ++    D+      D A        +V  ++ F++ I
Sbjct: 252  GTSEAEFFCFDTIAKRIVGKSCQTLFSASDVSRGPPPDLAA-------IVSLKFTFAVTI 304

Query: 924  SNYNRQNPMSSLTAIKIVTVEADGKKEKGKQVELPSSSE 1040
            +       MS+ +    V          G+Q  +P ++E
Sbjct: 305  N-------MSAFSVTNRVFSILSVLTNHGRQASIPCATE 336


>gb|AFW63447.1| hypothetical protein ZEAMMB73_293789 [Zea mays]
          Length = 520

 Score = 88.6 bits (218), Expect = 6e-15
 Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 2/262 (0%)
 Frame = +3

Query: 48  SFPPQKFSLMNFKDIFKKWNNADVLIDVIGFWSELGKKKIVSTKRGSSPLQNLHITDNDG 227
           +FP   + L +F++I    +N   LIDV+G  +E+G    V     S+ ++++ + D + 
Sbjct: 114 TFPRYAYKLTSFENIGNNVDNKTYLIDVLGILTEIGSLHHVGYNN-SNIIRDIFLKDINN 172

Query: 228 NKLMIAFWGETIKQIPPEDTFDATQMK--VVILTSTSVRRFNEEYHLQASFATKVYVEYD 401
               +  WG        ++ +D    K  VV+      +RF  E +L A+ A   Y   D
Sbjct: 173 TSTKVTLWGHQASSFSVDNIYDDNDNKPVVVLFVGCLAKRFKGEAYLSATAACTWYFNPD 232

Query: 402 TPEVTSFKNRGLNPSEKLTPPPKLTIKRTTDDFEHQVVNDKTNIKEILSAVTIVSSKDVH 581
            PE   + ++ LN   ++  P     ++     +   + DKT I+E+L     +  +   
Sbjct: 233 IPEAQVYYSKLLNTKLQMIRPQ--ATEKELQASQTLNIEDKT-IEELLQLDPDMFPEHGF 289

Query: 582 SCTATITKVHTNRGWYYTSCKKCMKVVKRKDGDIWYFNCNGFVEHVERFKIQFEIEDESG 761
            CT TI+++  +  W++ SC KC K   +        +CNG  E   R+K+ F   D + 
Sbjct: 290 KCTVTISRLVQDGRWWFPSCIKCNKSSSQTSTGYQCTSCNG-TETGFRYKLNFIATDGTS 348

Query: 762 TMDVTVFAAVAETLIGHSIDSM 827
             +   F ++A+ ++G S  ++
Sbjct: 349 EAEFFCFDSIAKRIVGKSCQTL 370