BLASTX nr result

ID: Aconitum21_contig00002717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00002717
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...   133   6e-29
ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2...   128   2e-27
ref|XP_001753074.1| predicted protein [Physcomitrella patens sub...   128   2e-27
ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   126   6e-27
gb|ACU24484.1| unknown [Glycine max]                                  126   6e-27

>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
           gi|355491412|gb|AES72615.1| RNA-binding protein
           [Medicago truncatula]
          Length = 380

 Score =  133 bits (334), Expect = 6e-29
 Identities = 67/98 (68%), Positives = 75/98 (76%)
 Frame = +1

Query: 580 GAYELWSLWRTTLSRIALL*RNL*IFPTA*KMSGRFSRMIYVGNLPLDIREREIEDLFYK 759
           GA E WSLW T L +   L   +    +   MS RFSR IYVGNLP DIRE EIEDLFYK
Sbjct: 79  GANEQWSLWSTALFKDCSLGLTVQFLQS--NMSSRFSRTIYVGNLPADIRESEIEDLFYK 136

Query: 760 YGRIVDIELKIPPRPPGYCFVEFEDARDAEDAIRGRDG 873
           YGRI++IELK+PPRPP YCFVEF++ARDAEDAIRGRDG
Sbjct: 137 YGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDG 174


>ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  128 bits (321), Expect = 2e-27
 Identities = 60/67 (89%), Positives = 63/67 (94%)
 Frame = +1

Query: 673 MSGRFSRMIYVGNLPLDIREREIEDLFYKYGRIVDIELKIPPRPPGYCFVEFEDARDAED 852
           MSGRFSR IYVGNLP DIRE EIEDLFYKYGRI+D+ELKIPPRPP YCFVEFE+ARDAED
Sbjct: 1   MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60

Query: 853 AIRGRDG 873
           AIRGRDG
Sbjct: 61  AIRGRDG 67


>ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162695773|gb|EDQ82115.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 279

 Score =  128 bits (321), Expect = 2e-27
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +1

Query: 673 MSGRFSRMIYVGNLPLDIREREIEDLFYKYGRIVDIELKIPPRPPGYCFVEFEDARDAED 852
           MS R SR IYVGNLP D+REREIEDLFYKYGRIVDI+LK+PPRPPGYCF+EFEDARDAED
Sbjct: 1   MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAED 60

Query: 853 AIRGRDG 873
           AIRGRDG
Sbjct: 61  AIRGRDG 67


>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 263

 Score =  126 bits (317), Expect = 6e-27
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +1

Query: 673 MSGRFSRMIYVGNLPLDIREREIEDLFYKYGRIVDIELKIPPRPPGYCFVEFEDARDAED 852
           MSGRFSR IYVGNLP DIRE EIEDLFYKYGRI+DIELK+PPRPP YCFVEF++ARDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 853 AIRGRDG 873
           AIRGRDG
Sbjct: 61  AIRGRDG 67


>gb|ACU24484.1| unknown [Glycine max]
          Length = 267

 Score =  126 bits (317), Expect = 6e-27
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +1

Query: 673 MSGRFSRMIYVGNLPLDIREREIEDLFYKYGRIVDIELKIPPRPPGYCFVEFEDARDAED 852
           MSGRFSR IYVGNLP DIRE EIEDLFYKYGRI+DIELK+PPRPP YCFVEF++ARDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 853 AIRGRDG 873
           AIRGRDG
Sbjct: 61  AIRGRDG 67


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