BLASTX nr result

ID: Aconitum21_contig00002613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00002613
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undul...   174   1e-41
gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]   171   6e-41
gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]    171   8e-41
dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris] gi|29...   171   8e-41
gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]   170   1e-40

>gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
          Length = 144

 Score =  174 bits (440), Expect = 1e-41
 Identities = 88/118 (74%), Positives = 102/118 (86%)
 Frame = -3

Query: 392 MAFAGKLGGLMRQSLLKNTVSNGHVPATSMFNAVRCMSTKLFVGGLSFGTDDQSLKDAFA 213
           MAF  KLGGL+RQS+  N VS    P  SMF+AVRCMSTKLFVGGLS+GTDDQSL+DAFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMFDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 212 SFGDVTEARVIVDRDTGRSRGFGFVNFTSEEAANSALSSMDGQDLQGRNIRVSIANER 39
           +FGDV +ARVIVDRD+GRSRGFGFVNF+ +E+AN A+ +MDGQ+LQGRNIRVSIA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117


>gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
          Length = 144

 Score =  171 bits (434), Expect = 6e-41
 Identities = 87/118 (73%), Positives = 101/118 (85%)
 Frame = -3

Query: 392 MAFAGKLGGLMRQSLLKNTVSNGHVPATSMFNAVRCMSTKLFVGGLSFGTDDQSLKDAFA 213
           MAF  KLGGL+RQS+  N VS    P  SM +AVRCMSTKLFVGGLS+GTDDQSL+DAFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 212 SFGDVTEARVIVDRDTGRSRGFGFVNFTSEEAANSALSSMDGQDLQGRNIRVSIANER 39
           +FGDV +ARVIVDRD+GRSRGFGFVNF+ +E+AN A+ +MDGQ+LQGRNIRVSIA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117


>gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
          Length = 144

 Score =  171 bits (433), Expect = 8e-41
 Identities = 86/118 (72%), Positives = 101/118 (85%)
 Frame = -3

Query: 392 MAFAGKLGGLMRQSLLKNTVSNGHVPATSMFNAVRCMSTKLFVGGLSFGTDDQSLKDAFA 213
           MAF  KLGGL+RQS+  N VS    P  SM +A+RCMSTKLFVGGLS+GTDDQSL+DAFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAIRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 212 SFGDVTEARVIVDRDTGRSRGFGFVNFTSEEAANSALSSMDGQDLQGRNIRVSIANER 39
           +FGDV +ARVIVDRD+GRSRGFGFVNF+ +E+AN A+ +MDGQ+LQGRNIRVSIA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117


>dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
           gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich
           protein [Nicotiana tabacum] gi|399931789|gb|AFP57444.1|
           RNA-binding glycine-rich protein [Nicotiana tabacum]
           gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich
           protein [Nicotiana acuminata]
           gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich
           protein [Nicotiana alata] gi|399931809|gb|AFP57454.1|
           RNA-binding glycine-rich protein [Nicotiana sylvestris]
          Length = 144

 Score =  171 bits (433), Expect = 8e-41
 Identities = 87/118 (73%), Positives = 100/118 (84%)
 Frame = -3

Query: 392 MAFAGKLGGLMRQSLLKNTVSNGHVPATSMFNAVRCMSTKLFVGGLSFGTDDQSLKDAFA 213
           MAF  KLGGL+RQS+  N VS    P  SM +AVRCMSTKLFVGGLS+GTDDQSL+DAFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 212 SFGDVTEARVIVDRDTGRSRGFGFVNFTSEEAANSALSSMDGQDLQGRNIRVSIANER 39
           +FGDV +ARVIVDRD+GRSRGFGFVNF+ +E AN A+ +MDGQ+LQGRNIRVSIA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQER 117


>gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
          Length = 144

 Score =  170 bits (431), Expect = 1e-40
 Identities = 86/118 (72%), Positives = 101/118 (85%)
 Frame = -3

Query: 392 MAFAGKLGGLMRQSLLKNTVSNGHVPATSMFNAVRCMSTKLFVGGLSFGTDDQSLKDAFA 213
           MAF  KLGGL+RQS+  N VS    P  SM +AVRCMSTKLFVGGLS+GTDDQSL+DAFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 212 SFGDVTEARVIVDRDTGRSRGFGFVNFTSEEAANSALSSMDGQDLQGRNIRVSIANER 39
           +FGDV +ARVIVDRD+GRSRGFGFVNF+ +E+AN A+ +MDGQ+LQGRNIRV+IA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVTIAQER 117


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