BLASTX nr result

ID: Aconitum21_contig00002475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00002475
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thal...   271   6e-71
ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidops...   268   5e-70
dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]     266   1e-69
emb|CBI30975.3| unnamed protein product [Vitis vinifera]              266   2e-69
ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isof...   266   2e-69

>ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
           gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA
           damage-binding protein 1a; AltName: Full=UV-damaged
           DNA-binding protein 1a; Short=DDB1a
           gi|7267302|emb|CAB81084.1| UV-damaged DNA binding
           factor-like protein [Arabidopsis thaliana]
           gi|25054828|gb|AAN71904.1| putative UV-damaged DNA
           binding factor [Arabidopsis thaliana]
           gi|332657117|gb|AEE82517.1| DNA damage-binding protein
           1a [Arabidopsis thaliana]
          Length = 1088

 Score =  271 bits (692), Expect = 6e-71
 Identities = 127/136 (93%), Positives = 134/136 (98%)
 Frame = +1

Query: 136 MSQWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKSTRIEIHLLTPQGLQPMLDVPIYG 315
           MS WNYVVTAHKPT+VTHSCVGNFTSPQELNLI+AK TRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1   MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 316 RIATLELFRPYGEAQDFLFIATERYKFCVLQWDPETSELITRAMGDVSDRIGRPTDHGQL 495
           RIATLELFRP+GEAQDFLFIATERYKFCVLQWDPE+SELITRAMGDVSDRIGRPTD+GQ+
Sbjct: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDPESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 496 GLIDPDCRLIGLHLYD 543
           G+IDPDCRLIGLHLYD
Sbjct: 121 GIIDPDCRLIGLHLYD 136


>ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
           lyrata] gi|297318592|gb|EFH49014.1| UV-damaged
           DNA-binding protein 1A [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1088

 Score =  268 bits (684), Expect = 5e-70
 Identities = 126/136 (92%), Positives = 133/136 (97%)
 Frame = +1

Query: 136 MSQWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKSTRIEIHLLTPQGLQPMLDVPIYG 315
           MS WNYVVTAHKPT+VTHSCVGNFTSPQELNLI+AK TRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1   MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 316 RIATLELFRPYGEAQDFLFIATERYKFCVLQWDPETSELITRAMGDVSDRIGRPTDHGQL 495
           RIATLELFRP+GEAQDFLFIATERYKFCVLQWD E+SELITRAMGDVSDRIGRPTD+GQ+
Sbjct: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 496 GLIDPDCRLIGLHLYD 543
           G+IDPDCRLIGLHLYD
Sbjct: 121 GIIDPDCRLIGLHLYD 136


>dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
          Length = 1088

 Score =  266 bits (681), Expect = 1e-69
 Identities = 125/136 (91%), Positives = 133/136 (97%)
 Frame = +1

Query: 136 MSQWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKSTRIEIHLLTPQGLQPMLDVPIYG 315
           MS WNYVVTAHKPT+VTHSCVGNFTSPQELNLI+AK TRIEIHLLTPQGLQPMLDVP+YG
Sbjct: 1   MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPMYG 60

Query: 316 RIATLELFRPYGEAQDFLFIATERYKFCVLQWDPETSELITRAMGDVSDRIGRPTDHGQL 495
           RIATLELFRP+GEAQDFLFIATERYKFCVLQWD E+SELITRAMGDVSDRIGRPTD+GQ+
Sbjct: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 496 GLIDPDCRLIGLHLYD 543
           G+IDPDCRLIGLHLYD
Sbjct: 121 GIIDPDCRLIGLHLYD 136


>emb|CBI30975.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score =  266 bits (680), Expect = 2e-69
 Identities = 126/136 (92%), Positives = 131/136 (96%)
 Frame = +1

Query: 136 MSQWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKSTRIEIHLLTPQGLQPMLDVPIYG 315
           MS WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAK TRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1   MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 316 RIATLELFRPYGEAQDFLFIATERYKFCVLQWDPETSELITRAMGDVSDRIGRPTDHGQL 495
           RIATLELFRP+GEAQDFLFIATERYKFCVLQWD E SE+ITRAMGDVSDRIGRPTD+GQ+
Sbjct: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIGRPTDNGQI 120

Query: 496 GLIDPDCRLIGLHLYD 543
           G+IDPDCRLIGLHLYD
Sbjct: 121 GIIDPDCRLIGLHLYD 136


>ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
          Length = 1089

 Score =  266 bits (680), Expect = 2e-69
 Identities = 126/136 (92%), Positives = 131/136 (96%)
 Frame = +1

Query: 136 MSQWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKSTRIEIHLLTPQGLQPMLDVPIYG 315
           MS WNYVVTAHKPTNVTHSCVGNFT PQELNLIIAK TRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1   MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 316 RIATLELFRPYGEAQDFLFIATERYKFCVLQWDPETSELITRAMGDVSDRIGRPTDHGQL 495
           RIATLELFRP+GEAQDFLFIATERYKFCVLQWD E SE+ITRAMGDVSDRIGRPTD+GQ+
Sbjct: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIGRPTDNGQI 120

Query: 496 GLIDPDCRLIGLHLYD 543
           G+IDPDCRLIGLHLYD
Sbjct: 121 GIIDPDCRLIGLHLYD 136


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