BLASTX nr result

ID: Aconitum21_contig00002468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00002468
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16056.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   181   7e-44
ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   171   7e-41
ref|XP_003552007.1| PREDICTED: eukaryotic translation initiation...   170   1e-40
ref|XP_003532029.1| PREDICTED: eukaryotic translation initiation...   170   1e-40

>emb|CBI16056.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  181 bits (458), Expect = 7e-44
 Identities = 90/121 (74%), Positives = 99/121 (81%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 GSKADD-KVGGDPLAQIGRG-AVLMVCRTCGKKGDHWTSKCPYKDLAPPPEGFIDKPATS 185
           GSKA++ KV GD LAQ+G+G AVLMVCRTCGKKGDHWTS+CPYKDLAPP EGFIDKPA S
Sbjct: 16  GSKAEESKVAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAAS 75

Query: 184 EXXXXXXXXXXXTYVPPSQRAGADRSGQEMRRRNDENSVRVTNLSEDTREPDLQDLFSTF 5
           E           TYVPP  RAGA+R+G EMRRRN+ENSVRVTNLSEDTREPDL +LF TF
Sbjct: 76  EGTATASGPSKGTYVPPGMRAGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTF 135

Query: 4   G 2
           G
Sbjct: 136 G 136


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score =  181 bits (458), Expect = 7e-44
 Identities = 90/121 (74%), Positives = 99/121 (81%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 GSKADD-KVGGDPLAQIGRG-AVLMVCRTCGKKGDHWTSKCPYKDLAPPPEGFIDKPATS 185
           GSKA++ KV GD LAQ+G+G AVLMVCRTCGKKGDHWTS+CPYKDLAPP EGFIDKPA S
Sbjct: 119 GSKAEESKVAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAAS 178

Query: 184 EXXXXXXXXXXXTYVPPSQRAGADRSGQEMRRRNDENSVRVTNLSEDTREPDLQDLFSTF 5
           E           TYVPP  RAGA+R+G EMRRRN+ENSVRVTNLSEDTREPDL +LF TF
Sbjct: 179 EGTATASGPSKGTYVPPGMRAGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTF 238

Query: 4   G 2
           G
Sbjct: 239 G 239


>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score =  171 bits (432), Expect = 7e-41
 Identities = 86/122 (70%), Positives = 98/122 (80%), Gaps = 3/122 (2%)
 Frame = -1

Query: 358 GSKADD-KVGGDPLAQIGRG-AVLMVCRTCGKKGDHWTSKCPYKDLAPPPEGFIDKPATS 185
           G+KAD+ K+ GD LAQ+G+G AVLMVCRTCGKKGDHWTS+CPYKDLA PPE FIDKPA +
Sbjct: 115 GTKADEAKMAGDNLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFIDKPAAT 174

Query: 184 EXXXXXXXXXXXTYVPPSQRAGADR-SGQEMRRRNDENSVRVTNLSEDTREPDLQDLFST 8
           E            YVPPS RAGA+R +G +MRRRN+ENSVRVTNLSEDTREPDL +LF T
Sbjct: 175 ETAMAASGATKGAYVPPSMRAGAERTTGSDMRRRNEENSVRVTNLSEDTREPDLLELFRT 234

Query: 7   FG 2
           FG
Sbjct: 235 FG 236


>ref|XP_003552007.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           G-like [Glycine max]
          Length = 290

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/121 (67%), Positives = 95/121 (78%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 GSKADD-KVGGDPLAQIGRGAVLMVCRTCGKKGDHWTSKCPYKDLAPPPEGFIDKPATSE 182
           G+K+++ K  GDPLAQ  +GAVLMVCRTCGKKGDHWTS+CPYKDLAPP EGF+DKPA ++
Sbjct: 113 GAKSEEPKNAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFVDKPAAAD 172

Query: 181 XXXXXXXXXXXTYVPPSQRAGADR-SGQEMRRRNDENSVRVTNLSEDTREPDLQDLFSTF 5
                       YVPP  RAGA+R +G +MRRRNDENSVRVTNLSEDTREPDL +LF  F
Sbjct: 173 TVAATAGATKGAYVPPGMRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPF 232

Query: 4   G 2
           G
Sbjct: 233 G 233


>ref|XP_003532029.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           G-A-like isoform 1 [Glycine max]
           gi|356526852|ref|XP_003532030.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit G-A-like isoform
           2 [Glycine max]
          Length = 290

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/121 (68%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 GSKADD-KVGGDPLAQIGRGAVLMVCRTCGKKGDHWTSKCPYKDLAPPPEGFIDKPATSE 182
           G+K ++ K  GDPLAQ  +GAVLMVCRTCGKKGDHWTS+CPYKDLAPP EGFIDKPA ++
Sbjct: 113 GAKTEEPKNAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAAAD 172

Query: 181 XXXXXXXXXXXTYVPPSQRAGADR-SGQEMRRRNDENSVRVTNLSEDTREPDLQDLFSTF 5
                       YVPP  RAGA+R +G +MRRRNDENSVRVTNLSEDTREPDL +LF  F
Sbjct: 173 AGAAAAGATKGAYVPPGMRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPF 232

Query: 4   G 2
           G
Sbjct: 233 G 233


Top