BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00002107
         (1970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sa...   172   4e-40
gb|ACG30634.1| hypothetical protein [Zea mays]                        169   2e-39
gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fra...   167   7e-39
ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrom...   164   6e-38
ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicag...   164   8e-38

>ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sativa]
            gi|297840977|ref|XP_002888370.1| photosystem I assembly
            protein Ycf3 [Arabidopsis lyrata subsp. lyrata]
            gi|78675169|dbj|BAE47595.1| photosystem I assembly
            protein ycf3 [Lactuca sativa] gi|255631288|gb|ACU16011.1|
            unknown [Glycine max] gi|297334211|gb|EFH64629.1|
            photosystem I assembly protein Ycf3 [Arabidopsis lyrata
            subsp. lyrata] gi|225200|prf||1211235AE ORF 82
          Length = 82

 Score =  172 bits (435), Expect = 4e-40
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = -3

Query: 1968 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1789
            MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1    MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 1788 PFLPQAFNNMAVICHYVRLSPL 1723
            PFLPQAFNNMAVICHYVRLSPL
Sbjct: 61   PFLPQAFNNMAVICHYVRLSPL 82


>gb|ACG30634.1| hypothetical protein [Zea mays]
          Length = 82

 Score =  169 bits (429), Expect = 2e-39
 Identities = 81/82 (98%), Positives = 81/82 (98%)
 Frame = -3

Query: 1968 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1789
            M AQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1    MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 1788 PFLPQAFNNMAVICHYVRLSPL 1723
            PFLPQAFNNMAVICHYVRLSPL
Sbjct: 61   PFLPQAFNNMAVICHYVRLSPL 82


>gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fraxinus chinensis]
          Length = 80

 Score =  167 bits (424), Expect = 7e-39
 Identities = 80/80 (100%), Positives = 80/80 (100%)
 Frame = -3

Query: 1968 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1789
            MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1    MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60

Query: 1788 PFLPQAFNNMAVICHYVRLS 1729
            PFLPQAFNNMAVICHYVRLS
Sbjct: 61   PFLPQAFNNMAVICHYVRLS 80


>ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrometrica]
            gi|340549408|gb|AEK53230.1| hypothetical chloroplast RF34
            (chloroplast) [Boea hygrometrica]
          Length = 171

 Score =  164 bits (416), Expect = 6e-38
 Identities = 78/78 (100%), Positives = 78/78 (100%)
 Frame = -3

Query: 1968 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1789
            MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 45   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 104

Query: 1788 PFLPQAFNNMAVICHYVR 1735
            PFLPQAFNNMAVICHYVR
Sbjct: 105  PFLPQAFNNMAVICHYVR 122


>ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicago truncatula]
          Length = 163

 Score =  164 bits (415), Expect = 8e-38
 Identities = 77/78 (98%), Positives = 78/78 (100%)
 Frame = -3

Query: 1968 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 1789
            MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43   MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102

Query: 1788 PFLPQAFNNMAVICHYVR 1735
            PFLPQAFNNMAVICHY+R
Sbjct: 103  PFLPQAFNNMAVICHYIR 120