BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00002028
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    71   1e-10
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    65   7e-09

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 3/163 (1%)
 Frame = +1

Query: 76  SSFVRNFWLVGVVELLVQIWKTRNRCRYDDG--KPSGAQLMFKVCKAIR-DAAINLKGTV 246
           S  V++     +V ++  IW   N  +Y DG  KP        + + +R    +++    
Sbjct: 158 SRMVQHVMNSAIVHIMWSIWLECNN-KYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGA 216

Query: 247 LNIQEFSLLQKFGISSKGRNNPTLTTSTWIPPPLGVIKACVDGSAVGSPGLCGAGVIFRD 426
            ++Q+F L + F I  K           W+PP  G +K   DGS VGSP     GVIFR 
Sbjct: 217 SSMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRA 276

Query: 427 ADANFVSALAKGMGVDSIIFAEWEACTLALEVAASHRWEKVWI 555
           +   F  A A+ +G  + + AE+ AC  A+E A       +WI
Sbjct: 277 SQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWI 319


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 34/97 (35%), Positives = 53/97 (54%)
 Frame = +1

Query: 265  SLLQKFGISSKGRNNPTLTTSTWIPPPLGVIKACVDGSAVGSPGLCGAGVIFRDADANFV 444
            ++L++F +S + R    +    W  P   ++K   DGS VG  GL   G +FRD+  +F+
Sbjct: 993  AILEEFSVSPRHRKYKDIILVLWKNPSPPLLKVNTDGSVVG--GLAACGGLFRDSSGSFL 1050

Query: 445  SALAKGMGVDSIIFAEWEACTLALEVAASHRWEKVWI 555
             A +  +G+ S+  AE  A  LALE AA H W  +W+
Sbjct: 1051 GAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWL 1087