BLASTX nr result

ID: Aconitum21_contig00001966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001966
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279834.1| PREDICTED: chlorophyll a-b binding protein C...   340   1e-91
ref|XP_002528105.1| chlorophyll A/B binding protein, putative [R...   337   1e-90
ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein C...   335   4e-90
gb|AEO51756.1| chloroplast chlorophyll A/B binding protein [Dimo...   335   6e-90
ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [P...   335   6e-90

>ref|XP_002279834.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic
           [Vitis vinifera] gi|147784938|emb|CAN77492.1|
           hypothetical protein VITISV_010727 [Vitis vinifera]
          Length = 288

 Score =  340 bits (873), Expect = 1e-91
 Identities = 166/202 (82%), Positives = 179/202 (88%)
 Frame = +3

Query: 42  SPFLGTRLQENAISNSGRFQARFGFGXXXXXXXXXXXXTTDRPLWFPGANAPEYLDGSLV 221
           S F+GTRL +   SN+GR QARFGFG             +DRPLWFPGA APE+LDG+LV
Sbjct: 13  SSFMGTRLPD-VHSNTGRVQARFGFGRKKAPAKKAAKRVSDRPLWFPGAVAPEWLDGTLV 71

Query: 222 GDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFEEGDVKSTPFQPYTEVFGL 401
           GDYGFDPFGLGKPAEYLQ+D DSLDQNLAKN+AGDVIGTRFE G+VKSTPFQPYTEVFGL
Sbjct: 72  GDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNIAGDVIGTRFEGGEVKSTPFQPYTEVFGL 131

Query: 402 QRFRECELIHGRWAMLATLGALAVESITGVTWQDAGKVELIDGSSYFGQPLPFSITTLIW 581
           QRFRECELIHGRWAMLATLGALAVES+TGVTWQDAGKVELI+GSSY GQPLPFS+TTLIW
Sbjct: 132 QRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIEGSSYLGQPLPFSMTTLIW 191

Query: 582 IEVLVVGYIEFQRNAELDPEKR 647
           IEVLV+GYIEFQRNAELDPEKR
Sbjct: 192 IEVLVIGYIEFQRNAELDPEKR 213


>ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223532494|gb|EEF34284.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 285

 Score =  337 bits (864), Expect = 1e-90
 Identities = 163/202 (80%), Positives = 177/202 (87%)
 Frame = +3

Query: 42  SPFLGTRLQENAISNSGRFQARFGFGXXXXXXXXXXXXTTDRPLWFPGANAPEYLDGSLV 221
           S F+GTRL +   SNSGR QARFGFG            T+DRPLW+PGA APE+LDGSLV
Sbjct: 11  SSFMGTRLPD-VYSNSGRVQARFGFGTKKSAPKRSAKPTSDRPLWYPGAKAPEWLDGSLV 69

Query: 222 GDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFEEGDVKSTPFQPYTEVFGL 401
           GDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN+AGD+IGTR E  DVKSTPFQPY+EVFGL
Sbjct: 70  GDYGFDPFGLGKPAEYLQFELDSLDQNLAKNIAGDIIGTRTEAADVKSTPFQPYSEVFGL 129

Query: 402 QRFRECELIHGRWAMLATLGALAVESITGVTWQDAGKVELIDGSSYFGQPLPFSITTLIW 581
           QRFRECELIHGRWAMLATLGAL VE +TGVTWQDAGKVEL++GSSY GQPLPFSITTLIW
Sbjct: 130 QRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIW 189

Query: 582 IEVLVVGYIEFQRNAELDPEKR 647
           IEVLV+GYIEFQRN+ELDPEKR
Sbjct: 190 IEVLVIGYIEFQRNSELDPEKR 211


>ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
           chloroplastic-like [Cucumis sativus]
           gi|449516143|ref|XP_004165107.1| PREDICTED: chlorophyll
           a-b binding protein CP29.2, chloroplastic-like [Cucumis
           sativus]
          Length = 284

 Score =  335 bits (859), Expect = 4e-90
 Identities = 165/204 (80%), Positives = 178/204 (87%), Gaps = 2/204 (0%)
 Frame = +3

Query: 42  SPFLGTRLQENAISNSGRFQARFGFGXXXXXXXXXXXXT--TDRPLWFPGANAPEYLDGS 215
           S FLGTRL E  + +SGR QARFGFG               +DRPLWFPGA APE+LDGS
Sbjct: 8   SSFLGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPEWLDGS 66

Query: 216 LVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFEEGDVKSTPFQPYTEVF 395
           LVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+AGD+IGTRFE  +VKSTPFQPYTEVF
Sbjct: 67  LVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVF 126

Query: 396 GLQRFRECELIHGRWAMLATLGALAVESITGVTWQDAGKVELIDGSSYFGQPLPFSITTL 575
           GLQRFRECELIHGRWAMLATLGAL+VE +TGVTWQDAGKVEL++GSSY GQPLPFSITTL
Sbjct: 127 GLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTL 186

Query: 576 IWIEVLVVGYIEFQRNAELDPEKR 647
           IWIEVLV+GYIEFQRNAELDPEKR
Sbjct: 187 IWIEVLVIGYIEFQRNAELDPEKR 210


>gb|AEO51756.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
          Length = 286

 Score =  335 bits (858), Expect = 6e-90
 Identities = 160/202 (79%), Positives = 174/202 (86%)
 Frame = +3

Query: 42  SPFLGTRLQENAISNSGRFQARFGFGXXXXXXXXXXXXTTDRPLWFPGANAPEYLDGSLV 221
           S FLGTRL  +  S SGR QARFGF             + DRPLW+PGA APEYLDGSLV
Sbjct: 11  SSFLGTRLPADVYSKSGRVQARFGFRTKKAAPKKFSKPSADRPLWYPGAKAPEYLDGSLV 70

Query: 222 GDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFEEGDVKSTPFQPYTEVFGL 401
           GDYGFDPFGLGKP EYLQ+DLDSLDQNLAKN+AGD+IGTR E  +VKSTPFQPYTEVFGL
Sbjct: 71  GDYGFDPFGLGKPVEYLQYDLDSLDQNLAKNMAGDIIGTRVESSEVKSTPFQPYTEVFGL 130

Query: 402 QRFRECELIHGRWAMLATLGALAVESITGVTWQDAGKVELIDGSSYFGQPLPFSITTLIW 581
           QRFRECELIHGRWAMLATLGAL+VE +TGVTWQDAGKVEL++GSSY GQPLPFSI+TLIW
Sbjct: 131 QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIW 190

Query: 582 IEVLVVGYIEFQRNAELDPEKR 647
           IEVL++GYIEFQRNAELDPEKR
Sbjct: 191 IEVLLIGYIEFQRNAELDPEKR 212


>ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa]
           gi|118489077|gb|ABK96345.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222855110|gb|EEE92657.1|
           light-harvesting complex II protein Lhcb4 [Populus
           trichocarpa]
          Length = 285

 Score =  335 bits (858), Expect = 6e-90
 Identities = 162/202 (80%), Positives = 175/202 (86%)
 Frame = +3

Query: 42  SPFLGTRLQENAISNSGRFQARFGFGXXXXXXXXXXXXTTDRPLWFPGANAPEYLDGSLV 221
           S F+GTRL +   SNSGR QARFGFG            T DRPLW+PGA APEYLDGSLV
Sbjct: 11  SSFMGTRLPD-IYSNSGRIQARFGFGGKKAPKKSIKPSTPDRPLWYPGAKAPEYLDGSLV 69

Query: 222 GDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFEEGDVKSTPFQPYTEVFGL 401
           GDYGFDPFGLGKPAEYLQF+LDSLDQNLAKNLAGD+IGTR E  DVKSTPFQPY+EVFGL
Sbjct: 70  GDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTPFQPYSEVFGL 129

Query: 402 QRFRECELIHGRWAMLATLGALAVESITGVTWQDAGKVELIDGSSYFGQPLPFSITTLIW 581
           QRFRECELIHGRWAMLATLGAL+VE +TGVTWQDAGKVEL++GSSY GQPLPFSIT LIW
Sbjct: 130 QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITALIW 189

Query: 582 IEVLVVGYIEFQRNAELDPEKR 647
           IE +++GYIEFQRNAELDPEKR
Sbjct: 190 IEAVIIGYIEFQRNAELDPEKR 211


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