BLASTX nr result

ID: Aconitum21_contig00001901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001901
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-contain...    79   7e-13
emb|CBI16127.3| unnamed protein product [Vitis vinifera]               79   7e-13
ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsi...    78   2e-12
ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028 [Arab...    78   2e-12
ref|NP_190242.1| methyl-CPG-binding domain protein 5 [Arabidopsi...    76   8e-12

>ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
           [Vitis vinifera]
          Length = 297

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
 Frame = -1

Query: 701 DWVPKDWRVMKRPRPDGSSI---DTYYYDPLTNRQLRSKREVLEFLANGTCTRSQKRL-- 537
           DW+P  W V  R R  G+S    D Y+ +P+T R+ RSK+EV  +L  G   +  K+   
Sbjct: 170 DWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKKNPD 229

Query: 536 NNMEGATKTLLLKNSQPIDFDSAATPEKLKSPQSINTEGIPGKVTWV-LGNSAGWTPFIG 360
           N+ E  TK      S P++F               N E +P  V WV  G+S GWTPFI 
Sbjct: 230 NSPEKGTK------SPPLNF---------------NFEDVPDTVKWVRTGSSEGWTPFIN 268

Query: 359 EEMVPEHIRLEWQAKFNPLVPKS 291
            + VPE  + +W A F  L  KS
Sbjct: 269 GQEVPESSKRDWAAAFEFLALKS 291


>emb|CBI16127.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
 Frame = -1

Query: 701 DWVPKDWRVMKRPRPDGSSI---DTYYYDPLTNRQLRSKREVLEFLANGTCTRSQKRL-- 537
           DW+P  W V  R R  G+S    D Y+ +P+T R+ RSK+EV  +L  G   +  K+   
Sbjct: 8   DWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKKNPD 67

Query: 536 NNMEGATKTLLLKNSQPIDFDSAATPEKLKSPQSINTEGIPGKVTWV-LGNSAGWTPFIG 360
           N+ E  TK      S P++F               N E +P  V WV  G+S GWTPFI 
Sbjct: 68  NSPEKGTK------SPPLNF---------------NFEDVPDTVKWVRTGSSEGWTPFIN 106

Query: 359 EEMVPEHIRLEWQAKFNPLVPKS 291
            + VPE  + +W A F  L  KS
Sbjct: 107 GQEVPESSKRDWAAAFEFLALKS 129


>ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
           gi|75180469|sp|Q9LTJ1.1|MBD6_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 6;
           Short=AtMBD6; Short=MBD06; AltName:
           Full=Methyl-CpG-binding protein MBD6
           gi|8885544|dbj|BAA97474.1| unnamed protein product
           [Arabidopsis thaliana] gi|28416643|gb|AAO42852.1|
           At5g59380 [Arabidopsis thaliana]
           gi|110743343|dbj|BAE99559.1| hypothetical protein
           [Arabidopsis thaliana] gi|332009795|gb|AED97178.1|
           methyl-CPG-binding domain 6 protein [Arabidopsis
           thaliana]
          Length = 225

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
 Frame = -1

Query: 701 DWVPKDWRVMKRPRPDGS---SIDTYYYDPLTNRQLRSKREVLEFLANGTCTRSQKRLNN 531
           +W+P  WRV  + R  G+   S+D YYY+P T R+ RS+ EVL +L +GT  R  K+  N
Sbjct: 79  NWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKRGTKKAEN 138

Query: 530 MEGATKTLLLKNSQPIDFDSAATPEKLKSPQSINTEGIPGKVTWVLGNSA--GWTPFIGE 357
                     + S  +   +A  P     P   + +  P KV+W + N+   GW P IG+
Sbjct: 139 TYFNPDHFEGQGSNRVT-RTATVPPPPPPPLDFDFKNPPDKVSWSMANAGEEGWIPNIGD 197

Query: 356 EMVPEHIRLEWQAKF 312
             V + +R +W   F
Sbjct: 198 VKVQDSVRRDWSTAF 212


>ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028 [Arabidopsis lyrata subsp.
           lyrata] gi|297321629|gb|EFH52050.1| hypothetical protein
           ARALYDRAFT_485028 [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
 Frame = -1

Query: 701 DWVPKDWRVMKRPRPDGS---SIDTYYYDPLTNRQLRSKREVLEFLANGTCTRSQKRLNN 531
           +W+P DWR   R R  G+   ++D +YY+P+T R+ RSK EVL +L +G   ++ K+  N
Sbjct: 33  NWLPPDWRTEVRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGAPKKAVKKAEN 92

Query: 530 MEGATKTLLLKNS-QPIDFDSAATPEKLKSPQSINTEGIPGKVTW--VLGNSAGWTPFIG 360
            +  ++    + S +     +    E    P + +   +P KVTW  + G+   W PFIG
Sbjct: 93  GDSLSEHSEGRGSIRRQTKSNKKANEPPPKPLNFDFLNVPEKVTWTGINGSEEAWLPFIG 152

Query: 359 EEMVPEHIRLEWQAKFNPLVPKSGG 285
           +  + E +  +W   F  +  ++ G
Sbjct: 153 DYKIQESVSQDWGRAFTLVTTQNAG 177


>ref|NP_190242.1| methyl-CPG-binding domain protein 5 [Arabidopsis thaliana]
           gi|75206905|sp|Q9SNC0.1|MBD5_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 5;
           Short=AtMBD5; Short=MBD05; AltName:
           Full=Methyl-CpG-binding protein MBD5
           gi|6523061|emb|CAB62328.1| putative protein [Arabidopsis
           thaliana] gi|17380750|gb|AAL36205.1| unknown protein
           [Arabidopsis thaliana] gi|23296870|gb|AAN13191.1|
           unknown protein [Arabidopsis thaliana]
           gi|332644653|gb|AEE78174.1| methyl-CPG-binding domain
           protein 5 [Arabidopsis thaliana]
          Length = 182

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
 Frame = -1

Query: 701 DWVPKDWRVMKRPRPDGS---SIDTYYYDPLTNRQLRSKREVLEFLANGT-CTRSQKRLN 534
           +W+P DWR   R R  G+   ++D +YY+P+T R+ RSK EVL +L +GT   +S K   
Sbjct: 33  NWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGTPKKKSVKTAE 92

Query: 533 NMEGATKTLLLKNSQPIDFDS-AATPEKLKSPQSINTEGIPGKVTW--VLGNSAGWTPFI 363
           N +  ++    + S      S     E    P + +   +P KVTW  + G+   W PFI
Sbjct: 93  NGDSHSEHSEGRGSARRQTKSNKKVTEPPPKPLNFDFLNVPEKVTWTGINGSEEAWLPFI 152

Query: 362 GEEMVPEHIRLEWQAKFNPLVPKSGG 285
           G+  + E +  +W   F  +  ++ G
Sbjct: 153 GDYKIQESVSQDWDRVFTLVTSQNAG 178


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