BLASTX nr result

ID: Aconitum21_contig00001894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001894
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264233.2| PREDICTED: photosystem I reaction center sub...   211   2e-52
emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]   206   4e-51
gb|AEC11064.1| photosystem I reaction center V [Camellia sinensis]    202   1e-49
gb|AAU21476.1| chloroplast photosystem I reaction center V [Came...   198   1e-48
ref|XP_004149569.1| PREDICTED: photosystem I reaction center sub...   197   3e-48

>ref|XP_002264233.2| PREDICTED: photosystem I reaction center subunit V, chloroplastic
           [Vitis vinifera] gi|296090036|emb|CBI39855.3| unnamed
           protein product [Vitis vinifera]
          Length = 194

 Score =  211 bits (537), Expect = 2e-52
 Identities = 127/225 (56%), Positives = 138/225 (61%), Gaps = 10/225 (4%)
 Frame = +1

Query: 13  FIQILYIS-------PPSPHSQLYPPHNKLEMASTCLYSTTFHAATTPTIQKQ-SHTLFQ 168
           FI IL IS       P       +  H  L MAS+  +S    ++   T+QK   H  FQ
Sbjct: 3   FIHILCISSSLSLFLPVIQSDHFFLSHLHLAMASSAFFSAPTFSSAATTLQKHLPHQSFQ 62

Query: 169 GLRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNATTMQTRR--KR 342
           GLRP                                               M TR   KR
Sbjct: 63  GLRPLSKPTDLSL----------------------------------TIPRMSTRPIPKR 88

Query: 343 SAGVVRSELSPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGLTHFEAGDTRAKE 522
           SAGVVR+EL+ SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNGLTHFEAGD+RAKE
Sbjct: 89  SAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSRAKE 148

Query: 523 YVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF 657
           YVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 149 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 193


>emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]
          Length = 161

 Score =  206 bits (525), Expect = 4e-51
 Identities = 118/194 (60%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
 Frame = +1

Query: 85  MASTCLYSTTFHAATTPTIQKQ-SHTLFQGLRPXXXXXXXXXXXXXXXXXXXXXXXXXXX 261
           MAS+  +S    ++   T+QK   H  FQGLRP                           
Sbjct: 1   MASSAFFSAPTFSSAATTLQKHLPHQYFQGLRPLSKPTDLSL------------------ 42

Query: 262 XXXXXXXXXXXXXXXXNATTMQTRR--KRSAGVVRSELSPSLVISLSTGLSLFLGRFVFF 435
                               M TR   KRSAGVVR+EL+ SLVISLSTGLSLFLGRFVFF
Sbjct: 43  ----------------TIPRMSTRPIPKRSAGVVRAELNTSLVISLSTGLSLFLGRFVFF 86

Query: 436 NFQRENVAKQVPEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYY 615
           NFQRENVAKQVP+QNGLTHFEAGD+RAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYY
Sbjct: 87  NFQRENVAKQVPQQNGLTHFEAGDSRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYY 146

Query: 616 ILATSSNGYDPKFF 657
           ILATSSNGYDPKFF
Sbjct: 147 ILATSSNGYDPKFF 160


>gb|AEC11064.1| photosystem I reaction center V [Camellia sinensis]
          Length = 163

 Score =  202 bits (513), Expect = 1e-49
 Identities = 98/115 (85%), Positives = 108/115 (93%)
 Frame = +1

Query: 313 ATTMQTRRKRSAGVVRSELSPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGLTH 492
           +T   T +KR +G +++EL+ SLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNG+TH
Sbjct: 48  STVKFTPKKRCSGAIKAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGMTH 107

Query: 493 FEAGDTRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF 657
           FEAGD+RAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 108 FEAGDSRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 162


>gb|AAU21476.1| chloroplast photosystem I reaction center V [Camellia sinensis]
          Length = 145

 Score =  198 bits (503), Expect = 1e-48
 Identities = 97/115 (84%), Positives = 106/115 (92%)
 Frame = +1

Query: 313 ATTMQTRRKRSAGVVRSELSPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGLTH 492
           +T   T +KR    +++EL+ SLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNG+TH
Sbjct: 30  STVKFTPKKRCNDAIKAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGMTH 89

Query: 493 FEAGDTRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF 657
           FEAGD+RAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 90  FEAGDSRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 144


>ref|XP_004149569.1| PREDICTED: photosystem I reaction center subunit V,
           chloroplastic-like [Cucumis sativus]
           gi|449519499|ref|XP_004166772.1| PREDICTED: photosystem
           I reaction center subunit V, chloroplastic-like [Cucumis
           sativus]
          Length = 158

 Score =  197 bits (501), Expect = 3e-48
 Identities = 98/114 (85%), Positives = 106/114 (92%)
 Frame = +1

Query: 316 TTMQTRRKRSAGVVRSELSPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGLTHF 495
           + + T+ +RS   V++EL+PSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHF
Sbjct: 46  SVVATKSRRSM-TVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHF 104

Query: 496 EAGDTRAKEYVSLLKSNDPVGFNIVDVLSWGSIGHIVAYYILATSSNGYDPKFF 657
           EAGD RAKEYVSLLKSNDPVGFNIVDVL+WGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 105 EAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158


Top