BLASTX nr result

ID: Aconitum21_contig00001876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001876
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|2235369...    94   7e-17
ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp....    94   9e-17
gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana] gi|196...    94   9e-17
ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger...    94   9e-17
ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215...    92   2e-16

>ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|223536978|gb|EEF38615.1| dc50,
            putative [Ricinus communis]
          Length = 210

 Score = 94.0 bits (232), Expect = 7e-17
 Identities = 52/100 (52%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = -1

Query: 1215 VVDRFSGRSRGFGFVTFDXXXXXXXXXXXMNGMDLDGRSITVDKAQPHQ-----XXXXXX 1051
            VVD+FSGRSRGFGFVTFD           MNGMDLDGR+ITVDKAQPHQ           
Sbjct: 39   VVDKFSGRSRGFGFVTFDEKKAMEEAIEEMNGMDLDGRTITVDKAQPHQGSGREHDGDRN 98

Query: 1050 XXXXXXXXXXXXXXXXXXXXXXXDCFKCGKPGHFARECPS 931
                                   +CFKCGKPGHFARECPS
Sbjct: 99   RDRGRDRDQNRDHGGRRPSGGGGECFKCGKPGHFARECPS 138


>ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297321156|gb|EFH51577.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 247

 Score = 93.6 bits (231), Expect = 9e-17
 Identities = 51/97 (52%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = -1

Query: 1215 VVDRFSGRSRGFGFVTFDXXXXXXXXXXXMNGMDLDGRSITVDKAQPHQ--XXXXXXXXX 1042
            V+D+FSGRSRGFGF+TFD           MNGMDLDGR+ITVDKAQPHQ           
Sbjct: 39   VLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGSGRDHDGDR 98

Query: 1041 XXXXXXXXXXXXXXXXXXXXDCFKCGKPGHFARECPS 931
                                DCFKCGKPGHFARECPS
Sbjct: 99   SRDRGYDRDRSRPSGGRGGGDCFKCGKPGHFARECPS 135


>gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana] gi|19699180|gb|AAL90956.1|
            AT3g26420/F20C19_14 [Arabidopsis thaliana]
          Length = 148

 Score = 93.6 bits (231), Expect = 9e-17
 Identities = 51/97 (52%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = -1

Query: 1215 VVDRFSGRSRGFGFVTFDXXXXXXXXXXXMNGMDLDGRSITVDKAQPHQ--XXXXXXXXX 1042
            V+D+FSGRSRGFGF+TFD           MNGMDLDGR+ITVDKAQPHQ           
Sbjct: 39   VLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDR 98

Query: 1041 XXXXXXXXXXXXXXXXXXXXDCFKCGKPGHFARECPS 931
                                DCFKCGKPGHFARECPS
Sbjct: 99   GRDRGYDRDRSRPSGGRGGGDCFKCGKPGHFARECPS 135


>ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
            protein [Arabidopsis thaliana]
            gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14
            [Arabidopsis thaliana] gi|9294301|dbj|BAB02203.1| unnamed
            protein product [Arabidopsis thaliana]
            gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis
            thaliana] gi|18377412|gb|AAL66872.1| unknown protein
            [Arabidopsis thaliana] gi|62320797|dbj|BAD93728.1|
            RNA-binding protein [Arabidopsis thaliana]
            gi|110742443|dbj|BAE99140.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|332643635|gb|AEE77156.1| RNA
            recognition motif and CCHC-type zinc finger
            domain-containing protein [Arabidopsis thaliana]
          Length = 245

 Score = 93.6 bits (231), Expect = 9e-17
 Identities = 51/97 (52%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = -1

Query: 1215 VVDRFSGRSRGFGFVTFDXXXXXXXXXXXMNGMDLDGRSITVDKAQPHQ--XXXXXXXXX 1042
            V+D+FSGRSRGFGF+TFD           MNGMDLDGR+ITVDKAQPHQ           
Sbjct: 39   VLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDR 98

Query: 1041 XXXXXXXXXXXXXXXXXXXXDCFKCGKPGHFARECPS 931
                                DCFKCGKPGHFARECPS
Sbjct: 99   GRDRGYDRDRSRPSGGRGGGDCFKCGKPGHFARECPS 135


>ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
            gi|449478936|ref|XP_004155458.1| PREDICTED:
            uncharacterized protein LOC101227324 [Cucumis sativus]
          Length = 211

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 53/100 (53%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = -1

Query: 1215 VVDRFSGRSRGFGFVTFDXXXXXXXXXXXMNGMDLDGRSITVDKAQPHQ-----XXXXXX 1051
            VVD+FSGRSRGFGFVTFD           MNGMDLDGRSITVDKAQP+Q           
Sbjct: 39   VVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRP 98

Query: 1050 XXXXXXXXXXXXXXXXXXXXXXXDCFKCGKPGHFARECPS 931
                                   DCFKCGKPGHFARECPS
Sbjct: 99   RGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPS 138


Top