BLASTX nr result

ID: Aconitum21_contig00001764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001764
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin...   129   6e-28
ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|2...   122   5e-26
ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|2...   122   5e-26
ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus...   120   2e-25
gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]    119   5e-25

>ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 474

 Score =  129 bits (323), Expect = 6e-28
 Identities = 77/144 (53%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
 Frame = +2

Query: 2   VRMVLQRACAFVTYTTRXXXXXXXXXLSNXXXXXXXXXXXXXXXSQAAKAELENQEDEAA 181
           VRMVLQRACAFVTYTTR         LSN                QA K E E+ E EA 
Sbjct: 257 VRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQAPKPEGESSE-EAR 315

Query: 182 RQQALAHGAMLPRAIVSQQHNXXXXXXXXXXXXXX-MHYFNIPPP-LTDRNYYPSMDPQR 355
           +Q ALAHG MLPRA++SQQ N               MHYFNIPPP   +R +YPSMDPQR
Sbjct: 316 QQAALAHGGMLPRAVISQQQNQVIQPPGTQDQPPPPMHYFNIPPPPQQERTFYPSMDPQR 375

Query: 356 MGALVPSQEGA---NSGPGDNKTG 418
           MGALVPSQEGA   ++GP +NK G
Sbjct: 376 MGALVPSQEGAPSGSAGPSENKAG 399


>ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|222850537|gb|EEE88084.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  122 bits (306), Expect = 5e-26
 Identities = 75/154 (48%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
 Frame = +2

Query: 2   VRMVLQRACAFVTYTTRXXXXXXXXXLSNXXXXXXXXXXXXXXXSQAAKAELENQEDEAA 181
           ++MV QRA AFVTYTTR         LSN                QA K E E+  DEA 
Sbjct: 257 IKMVPQRAIAFVTYTTREGAEKAAAELSNRLVIKGLRLKLMWGRPQAPKPESESS-DEAR 315

Query: 182 RQQALAHGAMLPRAIVSQQHNXXXXXXXXXXXXXXMHYFNIPPP-LTDRNYYPSMDPQRM 358
           +Q A+AH  MLPRA+VSQQHN              MHYFNIPPP   +R +YPSMDPQRM
Sbjct: 316 QQAAMAHSGMLPRAVVSQQHNHLNPPGTQDQHPP-MHYFNIPPPPQQERAFYPSMDPQRM 374

Query: 359 GALVPSQEGANSGP---GDNKTGLGNVPPGHNPY 451
           GALV SQ+G  +GP   G+NK+GL      H PY
Sbjct: 375 GALVGSQDGTPNGPAGSGENKSGLEKQLGQHYPY 408


>ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|222850535|gb|EEE88082.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  122 bits (306), Expect = 5e-26
 Identities = 75/154 (48%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
 Frame = +2

Query: 2   VRMVLQRACAFVTYTTRXXXXXXXXXLSNXXXXXXXXXXXXXXXSQAAKAELENQEDEAA 181
           ++MV QRA AFVTYTTR         LSN                QA K E E+  DEA 
Sbjct: 257 IKMVPQRAIAFVTYTTREGAEKAAAELSNRLVIKGLRLKLMWGRPQAPKPESESS-DEAR 315

Query: 182 RQQALAHGAMLPRAIVSQQHNXXXXXXXXXXXXXXMHYFNIPPP-LTDRNYYPSMDPQRM 358
           +Q A+AH  MLPRA+VSQQHN              MHYFNIPPP   +R +YPSMDPQRM
Sbjct: 316 QQAAMAHSGMLPRAVVSQQHNHLNPPGTQDQHPP-MHYFNIPPPPQQERAFYPSMDPQRM 374

Query: 359 GALVPSQEGANSGP---GDNKTGLGNVPPGHNPY 451
           GALV SQ+G  +GP   G+NK+GL      H PY
Sbjct: 375 GALVGSQDGTPNGPAGSGENKSGLEKQLGQHYPY 408


>ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus communis]
           gi|223540280|gb|EEF41851.1| RNA binding motif protein,
           putative [Ricinus communis]
          Length = 285

 Score =  120 bits (301), Expect = 2e-25
 Identities = 73/154 (47%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
 Frame = +2

Query: 2   VRMVLQRACAFVTYTTRXXXXXXXXXLSNXXXXXXXXXXXXXXXSQAAKAELENQEDEAA 181
           ++MV QRA AFVTYTTR         LSN                QA + ELE  E EA 
Sbjct: 75  IKMVPQRAIAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQAPRPELEGTE-EAR 133

Query: 182 RQQALAHGAMLPRAIVSQQHNXXXXXXXXXXXXXXMHYFNIPPP-LTDRNYYPSMDPQRM 358
           +Q A+AHG MLPRA++SQQ N              MHYFNIPPP   +R YYPSMDPQRM
Sbjct: 134 QQAAVAHGGMLPRAVISQQQNQLHPAGTQDQPPP-MHYFNIPPPPQQERTYYPSMDPQRM 192

Query: 359 GALVPSQEGANSGP---GDNKTGLGNVPPGHNPY 451
           GA+VPSQ+G  +GP   G+N+  +     GH PY
Sbjct: 193 GAVVPSQDGNPTGPTGSGENRNAMER-QQGHYPY 225


>gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
          Length = 479

 Score =  119 bits (298), Expect = 5e-25
 Identities = 71/156 (45%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
 Frame = +2

Query: 2   VRMVLQRACAFVTYTTRXXXXXXXXXLSNXXXXXXXXXXXXXXXSQAAKAELENQEDEAA 181
           ++MV+QR CAFVTYTTR         L+N                Q  K E E   DEA 
Sbjct: 257 IKMVVQRGCAFVTYTTREGAVKAAEELANKLVIKGLRLKLLWGRPQVPKPESE-VSDEAR 315

Query: 182 RQQALAHGAMLPRAIVSQQHNXXXXXXXXXXXXXXMHYFNIPP-PLTDRNYYPSMDPQRM 358
           +Q AL H  +LPRA+VSQQ N              M YFNIPP P  DR YYPSMDPQRM
Sbjct: 316 QQAALTHSGLLPRAVVSQQQNQPLQPPGTQDQPPSMPYFNIPPMPQQDRPYYPSMDPQRM 375

Query: 359 GALVPSQEGAN-----SGPGDNKTGLGNVPPGHNPY 451
           GA++ SQEGA+     SGPG+NK G  +    H  Y
Sbjct: 376 GAVIASQEGASSSTAGSGPGENKIGSDHQQGHHYAY 411


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