BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001616
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...    60   2e-07
emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]      57   1e-06
emb|CBI24922.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...    55   5e-06

>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 52/132 (39%), Positives = 62/132 (46%), Gaps = 31/132 (23%)
 Frame = -2

Query: 373  SVSNSVDPSETGDVVPAAKPKGRGGSXXXXXXXXXXXXXDSEEEFADEVLELKDRLAAYN 194
            S  NS + S   +VV   KPK RGGS             D EEE  DEVL LKDRLAAYN
Sbjct: 1209 SCFNSGNRSNVTEVV---KPKARGGSKKAPAKAKPIAVEDEEEEEDDEVLALKDRLAAYN 1265

Query: 193  INSSPEQSA-AMEME-----------------ETIPKGVADKAESDEEF----------- 101
            +NSSP+ SA AME E                 +T+P  +AD +E ++E            
Sbjct: 1266 LNSSPDHSAEAMETEAPKAQKKAPTRKAAAKKKTLP-SIADVSEGEDEIEISDDDESEPE 1324

Query: 100  --VAGPKGGRRK 71
              V G K G RK
Sbjct: 1325 VAVGGKKKGGRK 1336


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
          Length = 1467

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 7/65 (10%)
 Frame = -2

Query: 235  DEVLELKDRLAAYNINSSPEQSAAME---MEETIPKGVADKAESD----EEFVAGPKGGR 77
            DEVLELK+RLAAYN++SSPE SA  +    ++   K V  + +SD    EE  A PKGGR
Sbjct: 1265 DEVLELKERLAAYNLDSSPENSAGNDKVVQKKEANKKVVMQMDSDDDFEEEIAAAPKGGR 1324

Query: 76   RKVGG 62
            +K  G
Sbjct: 1325 KKAAG 1329


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/100 (37%), Positives = 52/100 (52%)
 Frame = -2

Query: 385  TLDESVSNSVDPSETGDVVPAAKPKGRGGSXXXXXXXXXXXXXDSEEEFADEVLELKDRL 206
            T+D S S++++     +VV   KPKGR                  ++E  DEV ELK+RL
Sbjct: 1180 TMDVSASSAMEMESVPEVV---KPKGRAAPRKAPAKKKEMPTSVLKDEDDDEVHELKERL 1236

Query: 205  AAYNINSSPEQSAAMEMEETIPKGVADKAESDEEFVAGPK 86
            AAYN+ SSP+ SAAME E  +P+  A + +      A  K
Sbjct: 1237 AAYNLESSPDGSAAMEAE--VPQVPAARKKEPSRRAAAQK 1274


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/100 (37%), Positives = 52/100 (52%)
 Frame = -2

Query: 385  TLDESVSNSVDPSETGDVVPAAKPKGRGGSXXXXXXXXXXXXXDSEEEFADEVLELKDRL 206
            T+D S S++++     +VV   KPKGR                  ++E  DEV ELK+RL
Sbjct: 1217 TMDVSASSAMEMESVPEVV---KPKGRAAPRKAPAKKKEMPTSVLKDEDDDEVHELKERL 1273

Query: 205  AAYNINSSPEQSAAMEMEETIPKGVADKAESDEEFVAGPK 86
            AAYN+ SSP+ SAAME E  +P+  A + +      A  K
Sbjct: 1274 AAYNLESSPDGSAAMEAE--VPQVPAARKKEPSRRAAAQK 1311