BLASTX nr result

ID: Aconitum21_contig00001558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001558
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]                    271   5e-71
gb|AAO23139.1| alpha tubulin [Populus tremuloides]                    271   5e-71
ref|XP_002301128.1| tubulin alpha-1 chain [Populus trichocarpa] ...   271   5e-71
sp|Q6VAG0.1|TBA2_GOSHI RecName: Full=Tubulin alpha-2 chain; AltN...   271   5e-71
sp|Q6VAF9.1|TBA4_GOSHI RecName: Full=Tubulin alpha-4 chain; AltN...   271   5e-71

>gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]
          Length = 451

 Score =  271 bits (692), Expect = 5e-71
 Identities = 139/156 (89%), Positives = 139/156 (89%)
 Frame = +3

Query: 3   IVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP 182
           IVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYP
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173

Query: 183 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 362
           SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ
Sbjct: 174 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 233

Query: 363 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 470
           VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 269


>gb|AAO23139.1| alpha tubulin [Populus tremuloides]
          Length = 451

 Score =  271 bits (692), Expect = 5e-71
 Identities = 139/156 (89%), Positives = 139/156 (89%)
 Frame = +3

Query: 3   IVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP 182
           IVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYP
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173

Query: 183 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 362
           SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ
Sbjct: 174 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 233

Query: 363 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 470
           VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 269


>ref|XP_002301128.1| tubulin alpha-1 chain [Populus trichocarpa]
           gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus
           tremuloides] gi|118488366|gb|ABK96001.1| unknown
           [Populus trichocarpa] gi|222842854|gb|EEE80401.1|
           tubulin alpha-1 chain [Populus trichocarpa]
          Length = 451

 Score =  271 bits (692), Expect = 5e-71
 Identities = 139/156 (89%), Positives = 139/156 (89%)
 Frame = +3

Query: 3   IVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP 182
           IVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYP
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173

Query: 183 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 362
           SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ
Sbjct: 174 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 233

Query: 363 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 470
           VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 269


>sp|Q6VAG0.1|TBA2_GOSHI RecName: Full=Tubulin alpha-2 chain; AltName: Full=Alpha-2-tubulin
           gi|37529488|gb|AAQ92662.1| alpha-tubulin 2 [Gossypium
           hirsutum] gi|223453024|gb|ACM89776.1| alpha-tubulin 2
           [Gossypium hirsutum]
          Length = 450

 Score =  271 bits (692), Expect = 5e-71
 Identities = 139/156 (89%), Positives = 139/156 (89%)
 Frame = +3

Query: 3   IVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP 182
           IVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYP
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173

Query: 183 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 362
           SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ
Sbjct: 174 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 233

Query: 363 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 470
           VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 269


>sp|Q6VAF9.1|TBA4_GOSHI RecName: Full=Tubulin alpha-4 chain; AltName: Full=Alpha-4-tubulin
           gi|37529490|gb|AAQ92663.1| alpha-tubulin 4 [Gossypium
           hirsutum]
          Length = 450

 Score =  271 bits (692), Expect = 5e-71
 Identities = 139/156 (89%), Positives = 139/156 (89%)
 Frame = +3

Query: 3   IVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP 182
           IVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYP
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173

Query: 183 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 362
           SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ
Sbjct: 174 SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQ 233

Query: 363 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 470
           VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML
Sbjct: 234 VISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML 269


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